Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_P04
         (893 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0WA84 Cluster: Tfp pilus assembly protein tip-associat...    35   3.2  
UniRef50_Q9JRR9 Cluster: Mannosyl transferase; n=1; Aggregatibac...    34   4.3  
UniRef50_A7TJD2 Cluster: Putative uncharacterized protein; n=1; ...    34   5.6  
UniRef50_Q5C0D8 Cluster: SJCHGC00965 protein; n=2; Schistosoma j...    33   7.4  
UniRef50_A5DS64 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_Q4SS61 Cluster: Chromosome 11 SCAF14479, whole genome s...    33   9.8  

>UniRef50_A0WA84 Cluster: Tfp pilus assembly protein tip-associated
           adhesin PilY1-like precursor; n=1; Geobacter lovleyi
           SZ|Rep: Tfp pilus assembly protein tip-associated
           adhesin PilY1-like precursor - Geobacter lovleyi SZ
          Length = 1686

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -2

Query: 292 NPLNNMYLQCHNN*ACGISDKHFQYRAILHRMFYK-NDGPKLYL 164
           NP+N       NN   G++D    Y  +   ++YK NDGPKLY+
Sbjct: 474 NPVNPRVTTSTNNYLVGLADTSRDYYKLYSGVYYKVNDGPKLYV 517


>UniRef50_Q9JRR9 Cluster: Mannosyl transferase; n=1; Aggregatibacter
           actinomycetemcomitans|Rep: Mannosyl transferase -
           Actinobacillus actinomycetemcomitans
           (Haemophilusactinomycetemcomitans)
          Length = 392

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = -2

Query: 328 LVLFYL*TKNLVNPLNNMYLQCHNN*ACGISDKHFQYRAILHRMFYKNDGPKLYLY 161
           L +FY     LV  +N  YL+ HN+ A   S      + +L ++FYK +  K YLY
Sbjct: 115 LSIFYKLKNRLV--INKSYLRVHNDEATYFSQLSKSEKNLLKKVFYKIESIKFYLY 168


>UniRef50_A7TJD2 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 920

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 406 SETEIDKKQK--IVRLTKSLK-EYK-FENTRENSHSTQIEGEPELGCLEYVSTYNFSNLD 573
           ++ EID + K  + +   S+K EY  FE+T    H  ++E       ++ +  YNFSN D
Sbjct: 142 TKNEIDSEWKADVKKYVDSIKTEYSYFESTNNLKHMNRLEK------IKQLEAYNFSNTD 195

Query: 574 VGFMKNKSLVHSHCISQSENTESE 645
           +    N  + +++ I   EN   E
Sbjct: 196 LTNTNNNDIDNNNIIENEENISDE 219


>UniRef50_Q5C0D8 Cluster: SJCHGC00965 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC00965 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 360

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
 Frame = +1

Query: 280 YLEDLPD--FWFTSKTEQVGDIFLLHIFIQRYCEGSFSISISHGSETEIDKKQKIVRLTK 453
           Y ++LPD  +W   K  ++ D+      +Q YC+  F  S     ET I  KQK++    
Sbjct: 178 YNKNLPDDYYWIDPKGNEINDV------VQAYCK--FKTS-----ETCIGLKQKVLN--- 221

Query: 454 SLKEYKFENTRENSHSTQIEGEP--ELGCLEYVSTYNFSNLDVGFMKNKSLV 603
                   N REN +ST+ E      LG   Y  TY      + F+K +SL+
Sbjct: 222 -------SNYRENENSTEQEEREGNNLGNQFYKLTYELEGSQLEFLKRQSLI 266


>UniRef50_A5DS64 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1124

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +1

Query: 382 FSISISHGSETEIDKKQKIVRLTKSLKEYKFENTRENSHSTQIEGEPELGCLEYVSTYN- 558
           F+ +I    + E+D +  + RL ++L E   E + ENS       +P L C E+    N 
Sbjct: 51  FNDNIPSEEQIEVDPETLVERLIETLVETLDETSPENSFEEPTFHKPYLWCKEFYQKQNR 110

Query: 559 FSNLDVGFMKNKSLVHS 609
           F N  + F  N+SLV +
Sbjct: 111 FKNPYIKF--NQSLVRN 125


>UniRef50_Q4SS61 Cluster: Chromosome 11 SCAF14479, whole genome
            shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
            Chromosome 11 SCAF14479, whole genome shotgun sequence -
            Tetraodon nigroviridis (Green puffer)
          Length = 1452

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 29/90 (32%), Positives = 38/90 (42%)
 Frame = -1

Query: 713  NLHPPNF*VILQKYELLTIYQKHSDSVFSDWEMQWLCTRDLFFMNPTSRLEKLYVLTYSK 534
            N H   F V L +Y LL  YQ H  ++ + +  Q  C R L    P S+   + V    K
Sbjct: 800  NKHEAKFVVALCRYLLLQDYQPHQITILTTYTGQLHCLRKLM---PASQFTGVKVHVVDK 856

Query: 533  QPSSGSPSICVE*LFSLVFSNLYSFSDFVN 444
                 +  I    L SLV SNL     F+N
Sbjct: 857  YQGEENDII----LLSLVRSNLQGKVGFLN 882


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,297,113
Number of Sequences: 1657284
Number of extensions: 16952268
Number of successful extensions: 38178
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38171
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)