Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_P04
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117274-1|AAI17275.1|  643|Homo sapiens LRRC37A3 protein protein.     31   5.6  
BC113643-1|AAI13644.1|  643|Homo sapiens LRRC37A3 protein protein.     31   5.6  
BC043145-1|AAH43145.1| 1634|Homo sapiens leucine rich repeat con...    31   5.6  
AK091625-1|BAC03710.1|  611|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AB011135-1|BAA25489.3| 1652|Homo sapiens KIAA0563 protein protein.     31   5.6  

>BC117274-1|AAI17275.1|  643|Homo sapiens LRRC37A3 protein protein.
          Length = 643

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +1

Query: 364 RYCEGSFSISISHGSETEIDKKQKIVRLTKSLKEYKFENTREN-SHST-QIEGEPELGCL 537
           R+ + + +ISI   ++  +   +    +  S K+Y+F  TR   +H T +++  P++   
Sbjct: 280 RWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKK 339

Query: 538 EYVSTYNFSNLDVGFMKNKSLVHS 609
            Y+S    SN  + F   KSL++S
Sbjct: 340 SYLSRLMLSN-RLPFSAAKSLINS 362


>BC113643-1|AAI13644.1|  643|Homo sapiens LRRC37A3 protein protein.
          Length = 643

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +1

Query: 364 RYCEGSFSISISHGSETEIDKKQKIVRLTKSLKEYKFENTREN-SHST-QIEGEPELGCL 537
           R+ + + +ISI   ++  +   +    +  S K+Y+F  TR   +H T +++  P++   
Sbjct: 280 RWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKK 339

Query: 538 EYVSTYNFSNLDVGFMKNKSLVHS 609
            Y+S    SN  + F   KSL++S
Sbjct: 340 SYLSRLMLSN-RLPFSAAKSLINS 362


>BC043145-1|AAH43145.1| 1634|Homo sapiens leucine rich repeat
            containing 37, member A3 protein.
          Length = 1634

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +1

Query: 364  RYCEGSFSISISHGSETEIDKKQKIVRLTKSLKEYKFENTREN-SHST-QIEGEPELGCL 537
            R+ + + +ISI   ++  +   +    +  S K+Y+F  TR   +H T +++  P++   
Sbjct: 1271 RWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKK 1330

Query: 538  EYVSTYNFSNLDVGFMKNKSLVHS 609
             Y+S    SN  + F   KSL++S
Sbjct: 1331 SYLSRLMLSN-RLPFSAAKSLINS 1353


>AK091625-1|BAC03710.1|  611|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34306 fis, clone FEBRA2008086. ).
          Length = 611

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +1

Query: 364 RYCEGSFSISISHGSETEIDKKQKIVRLTKSLKEYKFENTREN-SHST-QIEGEPELGCL 537
           R+ + + +ISI   ++  +   +    +  S K+Y+F  TR   +H T +++  P++   
Sbjct: 248 RWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKK 307

Query: 538 EYVSTYNFSNLDVGFMKNKSLVHS 609
            Y+S    SN  + F   KSL++S
Sbjct: 308 SYLSRLMLSN-RLPFSAAKSLINS 330


>AB011135-1|BAA25489.3| 1652|Homo sapiens KIAA0563 protein protein.
          Length = 1652

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +1

Query: 364  RYCEGSFSISISHGSETEIDKKQKIVRLTKSLKEYKFENTREN-SHST-QIEGEPELGCL 537
            R+ + + +ISI   ++  +   +    +  S K+Y+F  TR   +H T +++  P++   
Sbjct: 1289 RWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKK 1348

Query: 538  EYVSTYNFSNLDVGFMKNKSLVHS 609
             Y+S    SN  + F   KSL++S
Sbjct: 1349 SYLSRLMLSN-RLPFSAAKSLINS 1371


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,661,537
Number of Sequences: 237096
Number of extensions: 2506535
Number of successful extensions: 3813
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3813
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)