Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_P04
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 33 0.36
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 33 0.36
U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain in... 32 0.64
U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain in... 32 0.64
U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain int... 32 0.64
AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of p... 32 0.64
AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical... 32 0.64
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z98877-8|CAB63404.3| 475|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF038606-5|AAB92024.2| 352|Caenorhabditis elegans Hypothetical ... 29 5.9
Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical p... 28 7.8
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 680 EGLLKNLEDADFTLVV*RWRKIRVHKAXLAAHSDV 784
E L ++ + ADFTLVV R+++ HKA LAA S V
Sbjct: 194 ENLYRSGKHADFTLVV-EERELKAHKAILAARSPV 227
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 680 EGLLKNLEDADFTLVV*RWRKIRVHKAXLAAHSDV 784
E L ++ + ADFTLVV R+++ HKA LAA S V
Sbjct: 201 ENLYRSGKHADFTLVV-EERELKAHKAILAARSPV 234
>U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform c protein.
Length = 740
Score = 31.9 bits (69), Expect = 0.64
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +1
Query: 238 KFHRPNYYDIGGTYY-LEDLPDFWFTSKTEQVGD----IFLLHIFIQRYCEGSFSISISH 402
K PN+ ++GG+YY L+ + ++ +S T + + IF + I R C G S + H
Sbjct: 281 KSESPNHTNVGGSYYRLKTVEEYEASSSTAKSKETRKYIFNVIDDISRVCYGFESDPVEH 340
Query: 403 GSETEIDKKQKIVRLTKSLKEYKFENTRENSHSTQIEG-EPELGCLEYVSTYNFSN 567
+ ID+++ + L K L + T EG E + + +++ YNF+N
Sbjct: 341 LCD-RIDRQEFVDVLKKMLV------LNPDFRITPAEGLESKFVTMTHINGYNFAN 389
>U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform a protein.
Length = 821
Score = 31.9 bits (69), Expect = 0.64
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +1
Query: 238 KFHRPNYYDIGGTYY-LEDLPDFWFTSKTEQVGD----IFLLHIFIQRYCEGSFSISISH 402
K PN+ ++GG+YY L+ + ++ +S T + + IF + I R C G S + H
Sbjct: 362 KSESPNHTNVGGSYYRLKTVEEYEASSSTAKSKETRKYIFNVIDDISRVCYGFESDPVEH 421
Query: 403 GSETEIDKKQKIVRLTKSLKEYKFENTRENSHSTQIEG-EPELGCLEYVSTYNFSN 567
+ ID+++ + L K L + T EG E + + +++ YNF+N
Sbjct: 422 LCD-RIDRQEFVDVLKKMLV------LNPDFRITPAEGLESKFVTMTHINGYNFAN 470
>U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform b protein.
Length = 846
Score = 31.9 bits (69), Expect = 0.64
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +1
Query: 238 KFHRPNYYDIGGTYY-LEDLPDFWFTSKTEQVGD----IFLLHIFIQRYCEGSFSISISH 402
K PN+ ++GG+YY L+ + ++ +S T + + IF + I R C G S + H
Sbjct: 387 KSESPNHTNVGGSYYRLKTVEEYEASSSTAKSKETRKYIFNVIDDISRVCYGFESDPVEH 446
Query: 403 GSETEIDKKQKIVRLTKSLKEYKFENTRENSHSTQIEG-EPELGCLEYVSTYNFSN 567
+ ID+++ + L K L + T EG E + + +++ YNF+N
Sbjct: 447 LCD-RIDRQEFVDVLKKMLV------LNPDFRITPAEGLESKFVTMTHINGYNFAN 495
>AY551964-1|AAS65428.1| 795|Caenorhabditis elegans enhancer of
polycomb protein.
Length = 795
Score = 31.9 bits (69), Expect = 0.64
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +1
Query: 115 ITRAQTSSSGIPKEENRDIVLGHRSCKTCDAKWLCIENVYQKFHRPNYYDIGGTYYLE-D 291
I Q S+SGI + ++ + + D ++ + K HR Y + LE D
Sbjct: 61 IAAQQASTSGI---QLNHVIPTPKVDRVEDQRYHSTYHNKNKMHRSKYIKVHAWQALERD 117
Query: 292 LPDFWFTSKTEQ-VGDIFLLHIFIQ-RYCEGSFSISISHGSETEIDKKQKIVRLTKSL 459
P++ + ++ E + D H I R E F SH SET+I + ++ L KSL
Sbjct: 118 EPEYDYDTEDEAWLSD----HTHIDPRVLEKIFDTVESHSSETQIASEDSVINLHKSL 171
>AL132904-22|CAC35840.2| 795|Caenorhabditis elegans Hypothetical
protein Y111B2A.11 protein.
Length = 795
Score = 31.9 bits (69), Expect = 0.64
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +1
Query: 115 ITRAQTSSSGIPKEENRDIVLGHRSCKTCDAKWLCIENVYQKFHRPNYYDIGGTYYLE-D 291
I Q S+SGI + ++ + + D ++ + K HR Y + LE D
Sbjct: 61 IAAQQASTSGI---QLNHVIPTPKVDRVEDQRYHSTYHNKNKMHRSKYIKVHAWQALERD 117
Query: 292 LPDFWFTSKTEQ-VGDIFLLHIFIQ-RYCEGSFSISISHGSETEIDKKQKIVRLTKSL 459
P++ + ++ E + D H I R E F SH SET+I + ++ L KSL
Sbjct: 118 EPEYDYDTEDEAWLSD----HTHIDPRVLEKIFDTVESHSSETQIASEDSVINLHKSL 171
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 361 QRYCEGSFSISISHGSETEIDKKQKIVRLTKSLKEYKFENTRENSH 498
+R S S S +G+ I++K+KIV L + LKE + + +E+ H
Sbjct: 487 ERLVHQSLSKSTEYGARESIEEKKKIVELEELLKETE-KRIKESEH 531
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 361 QRYCEGSFSISISHGSETEIDKKQKIVRLTKSLKEYKFENTRENSH 498
+R S S S +G+ I++K+KIV L + LKE + + +E+ H
Sbjct: 487 ERLVHQSLSKSTEYGARESIEEKKKIVELEELLKETE-KRIKESEH 531
>Z98877-8|CAB63404.3| 475|Caenorhabditis elegans Hypothetical
protein Y69H2.7 protein.
Length = 475
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 286 EDLPDFWFTSKTEQVGDIFLLHIFIQRYCEGSFSISISHGSETEIDKKQKIVRLTKSLKE 465
E + F Q+G++ L +I ++ S IS+ SETE Q KSL E
Sbjct: 14 EAASEITFNDNFIQIGNVKLSNIDLRSIVRKSEEISLDDDSETE-KTLQNDPDFMKSLDE 72
Query: 466 YKFENTRE 489
Y E ++E
Sbjct: 73 YASEKSKE 80
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 385 SISISHGSETEIDKKQKIVRLTKSLKEYKFENTRENSHSTQIEGEPE 525
S+S S + EI+ +++ V+LTK L + K T + S + +GE +
Sbjct: 555 SMSDSEKEKAEIENRKRRVKLTKKLIKEKRGQTSNDRSSDEDDGEQQ 601
>AF038606-5|AAB92024.2| 352|Caenorhabditis elegans Hypothetical
protein C04C3.3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 313 SKTEQVGDIFLLHIFIQRYCEG-SFSISISHGSETEIDKKQKIVRLTKSLKEYKFENTRE 489
+K E+ GD H+ I Y G FS+ + E I +++ L +SL+ + FE+ R+
Sbjct: 220 AKIERAGD----HVTIVSYSRGVEFSLEAAKQLEA-IGVSAEVINL-RSLRPFDFESIRQ 273
Query: 490 NSHST 504
+ H T
Sbjct: 274 SVHKT 278
>Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 394 ISHGSETEID-KKQKIVRLTKSLKEYKFENTRENSHSTQI-EGEPELG 531
ISH + + +K V KSL E + EN EN H Q+ +G E+G
Sbjct: 268 ISHAKKVFLAIEKFDGVPAAKSLNETELENFLENEHDKQVADGNTEVG 315
>Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 394 ISHGSETEID-KKQKIVRLTKSLKEYKFENTRENSHSTQI-EGEPELG 531
ISH + + +K V KSL E + EN EN H Q+ +G E+G
Sbjct: 268 ISHAKKVFLAIEKFDGVPAAKSLNETELENFLENEHDKQVADGNTEVG 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,898,630
Number of Sequences: 27780
Number of extensions: 440751
Number of successful extensions: 1108
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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