Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_P03
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 92 9e-20
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 86 6e-18
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 63 5e-11
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 60 3e-10
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 48 2e-06
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 35 0.014
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 33 0.056
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 31 0.30
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 30 0.39
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.6
SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|ch... 28 2.1
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.8
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 4.8
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.4
SPAC16A10.05c |dad1||DASH complex subunit Dad1|Schizosaccharomyc... 26 8.4
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 92.3 bits (219), Expect = 9e-20
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +1
Query: 430 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 609
T V A+ GYR IDTA+IYGNEK IG+ I+ + V R ++++ KLW HR
Sbjct: 38 TKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR----ESGVPRTDIWVTSKLWCNAHRAG 93
Query: 610 LVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSIPK-ISSVIQYSEFDYMDAWFGMED 786
LV A +L DL LE+ D +LIH P +L G +P+ + Y + + W ME+
Sbjct: 94 LVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEELPRNEKGELIYEDVPIEETWQAMEE 153
Query: 787 LVAKGLAKSIG 819
L+ G + IG
Sbjct: 154 LLETGKVRYIG 164
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 809 RASGVSNFNSTQIQXILDKGKVNPAVNQVE 898
R G+SNFN+ + +L KV P ++Q+E
Sbjct: 161 RYIGISNFNNEYLDRVLKIAKVKPTIHQME 190
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 86.2 bits (204), Expect = 6e-18
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Frame = +1
Query: 430 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 609
T V+TA+ GYR ID A IYGNE +G IK + G R+D +++ KLW H +
Sbjct: 39 TKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESGVPRKD-IWVTSKLWCNAHAPE 94
Query: 610 LVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSIPK-ISSVIQYSEFDYMDAWFGMED 786
V A +L DL L++ D +LIH P+S K G PK + Y + + W ME
Sbjct: 95 AVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPKDKDGNLIYEKNPIEETWKAMEK 154
Query: 787 LVAKGLAKSIG 819
L+ G + IG
Sbjct: 155 LLETGKVRHIG 165
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 809 RASGVSNFNSTQIQXILDKGKVNPAVNQVE 898
R G+SNFN T ++ IL KV PAV+Q+E
Sbjct: 162 RHIGLSNFNDTNLERILKVAKVKPAVHQME 191
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 63.3 bits (147), Expect = 5e-11
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +1
Query: 439 IVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKL--WSTFHRTDL 612
+V A+D GYR IDTA +YGNE + GKAI + + V+R ++F+ KL S ++ T
Sbjct: 37 LVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANCSDYYST-- 94
Query: 613 VETACRISLADLGLEFFDLFLIHNPMSLKE 702
A R SL LG + DLFLI +P K+
Sbjct: 95 -RAAIRSSLHHLG-TYIDLFLIQSPAGGKK 122
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 60.5 bits (140), Expect = 3e-10
Identities = 46/137 (33%), Positives = 65/137 (47%)
Frame = +1
Query: 442 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 621
V+ A+ G+ ID A +YGNE+ +G A+K + V R +LFI K+ H D +
Sbjct: 37 VKNALAAGFIHIDCAEVYGNEEEVGVALK----EANVPRSKLFITSKV---MHNVDNIPE 89
Query: 622 ACRISLADLGLEFFDLFLIHNPMSLKEGNSSIPKISSVIQYSEFDYMDAWFGMEDLVAKG 801
A SL LG ++ DL+L+H+P IP I SE W ME + G
Sbjct: 90 ALNESLRKLGTDYLDLYLLHSP---------IPFYEKKIPISE-----GWKAMETALGTG 135
Query: 802 LAKSIGGQQLQFDPDPE 852
L S+G + PD E
Sbjct: 136 LVHSVGVSNFRI-PDLE 151
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 818 GVSNFNSTQIQXILDKGKVNPAVNQVE 898
GVSNF ++ +L + P VNQ+E
Sbjct: 141 GVSNFRIPDLEELLKTSTITPRVNQIE 167
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 47.6 bits (108), Expect = 2e-06
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +1
Query: 442 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 621
V A+ GYR ID+A +Y NE G+AI +++ +R++++ KL + +
Sbjct: 33 VYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKL-NDLSGYKSTLS 91
Query: 622 ACRISLADLGLEFFDLFLIHNP 687
+ S+ GL + DLFL+H+P
Sbjct: 92 SIDASVKACGLGYIDLFLLHSP 113
Score = 33.1 bits (72), Expect = 0.056
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 809 RASGVSNFNSTQIQXILDK-GKVNPAVNQVE 898
RA GVSNF IQ +LD K+ P VNQ+E
Sbjct: 134 RAIGVSNFGPHHIQELLDSHPKIIPCVNQIE 164
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 35.1 bits (77), Expect = 0.014
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Frame = +1
Query: 430 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIKN---KIDDGTVRRDELFIMG-KLW 588
T ++ A D+G DTA IY N E ++GKAIK + + F G KL
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLP 105
Query: 589 ST--FHRTDLVETACRISLADLGLEFFDLFLIHNP 687
+T R ++E SL LGL + D+ + H P
Sbjct: 106 NTTGLSRKHIIE-GLNASLKRLGLPYVDVIMAHRP 139
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 33.1 bits (72), Expect = 0.056
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Frame = +1
Query: 439 IVETAIDMGYRAIDTAYIYG---NEKLIGKAIKNKIDDGTVRRDELFIMGKLW------- 588
++ A D+G D++ +YG NE+ IG+ K T RR E+F+ K
Sbjct: 38 VLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQ-----TGRRKEIFLATKFGYEKNPET 92
Query: 589 ---STFHRTDLVETACRISLADLGLEFFDLFLIH 681
S + D +E A +SL LG++ DL+ +H
Sbjct: 93 GELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
Score = 29.1 bits (62), Expect = 0.90
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 690 HRIVDEEEVEKLQAQVCQ*NPAGRLHQIGAMECTPQFTHNEKLVSPHGAVVNLVLDRFSY 511
HR E +EK+ + + AG++ IG EC+ V P A V + FS
Sbjct: 126 HRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSA-VQVEYSPFSL 184
Query: 510 EL 505
E+
Sbjct: 185 EI 186
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = -2
Query: 328 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQIIF 155
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q ++
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQSVY 105
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 818 GVSNFNSTQIQXILDKGKVNPAVNQVE 898
GVSN+N ++ I+ G PA+NQVE
Sbjct: 138 GVSNYNIHHLEEIISLGLPLPAINQVE 164
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 385 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 254
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 340 LPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQI 161
+P S S + L+ +V S + L + CP D L+ +I+L+ H+ +
Sbjct: 58 IPLSPTSLKNPCLIFSAKNVPSISIQAYLTRILKYCPATNDVFLSVLIYLDRIVHHFHFT 117
Query: 160 IFI 152
+FI
Sbjct: 118 VFI 120
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 379 VPSRSFKVATSFTLPFSLASFSSAILV 299
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 421 HGLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 540
H +TE+ + +I G RA+D N + I NK++
Sbjct: 376 HSSSTELSDNSIHQGRRAVDPVVNQNNPSNFEEMIMNKLN 415
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 346 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 203
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
>SPAC16A10.05c |dad1||DASH complex subunit Dad1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 85
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 145 DFTKDFQNKN*KNIQNLRFSKTRRLLS 65
D T++ QN+ K+ ++ F + RRLL+
Sbjct: 2 DITENIQNEQNKDFDDIDFERRRRLLT 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,583,783
Number of Sequences: 5004
Number of extensions: 74548
Number of successful extensions: 263
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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