BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_P02
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99802-1|CAA68137.1| 766|Homo sapiens ZYG homologue protein. 67 7e-11
BC052563-1|AAH52563.1| 766|Homo sapiens zer-1 homolog (C. elega... 67 7e-11
BC033884-1|AAH33884.1| 195|Homo sapiens ZER1 protein protein. 67 7e-11
AL441992-8|CAI15408.1| 165|Homo sapiens zer-1 homolog (C. elega... 67 7e-11
AL441992-7|CAI15407.1| 766|Homo sapiens zer-1 homolog (C. elega... 67 7e-11
AL441992-9|CAI15409.1| 101|Homo sapiens zer-1 homolog (C. elega... 42 0.003
AB051517-1|BAB21821.1| 787|Homo sapiens KIAA1730 protein protein. 41 0.005
AF098638-1|AAC70781.1| 829|Homo sapiens rabaptin-4 protein. 34 0.78
AY499342-1|AAS86447.1| 662|Homo sapiens interleukin 31RA splice... 30 9.7
AY499341-1|AAS86446.1| 764|Homo sapiens interleukin 31RA splice... 30 9.7
AY499340-1|AAS86445.1| 324|Homo sapiens interleukin 31RA splice... 30 9.7
AY499339-1|AAS86444.1| 649|Homo sapiens interleukin 31RA splice... 30 9.7
AY358740-1|AAQ89100.1| 582|Homo sapiens GLM-R protein. 30 9.7
AY358117-1|AAQ88484.1| 732|Homo sapiens GLM-R protein. 30 9.7
AF486620-1|AAM27958.1| 732|Homo sapiens gp130-like monocyte rec... 30 9.7
AF106913-1|AAL36452.1| 509|Homo sapiens CRL3 protein protein. 30 9.7
AB033065-1|BAA86553.2| 1164|Homo sapiens KIAA1239 protein protein. 30 9.7
>X99802-1|CAA68137.1| 766|Homo sapiens ZYG homologue protein.
Length = 766
Score = 67.3 bits (157), Expect = 7e-11
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = +3
Query: 393 SPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIY-QRINRI--- 560
+P+SL+ +C ++ + +L+ +L DI LP+EIC++ + Y + +N
Sbjct: 5 TPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNF 64
Query: 561 --NDNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVELIQCEYLSPMSLETI 734
+++ +LF D TRL I LR + D+ + + E+ L CE LS SL+T+
Sbjct: 65 EPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTL 124
Query: 735 NRNSRNLVSLKFGPATHVLAQDES 806
S LVSL T++ ++E+
Sbjct: 125 RSFSHTLVSLSLFGCTNIFYEEEN 148
>BC052563-1|AAH52563.1| 766|Homo sapiens zer-1 homolog (C. elegans)
protein.
Length = 766
Score = 67.3 bits (157), Expect = 7e-11
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = +3
Query: 393 SPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIY-QRINRI--- 560
+P+SL+ +C ++ + +L+ +L DI LP+EIC++ + Y + +N
Sbjct: 5 TPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNF 64
Query: 561 --NDNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVELIQCEYLSPMSLETI 734
+++ +LF D TRL I LR + D+ + + E+ L CE LS SL+T+
Sbjct: 65 EPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTL 124
Query: 735 NRNSRNLVSLKFGPATHVLAQDES 806
S LVSL T++ ++E+
Sbjct: 125 RSFSHTLVSLSLFGCTNIFYEEEN 148
>BC033884-1|AAH33884.1| 195|Homo sapiens ZER1 protein protein.
Length = 195
Score = 67.3 bits (157), Expect = 7e-11
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = +3
Query: 393 SPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIY-QRINRI--- 560
+P+SL+ +C ++ + +L+ +L DI LP+EIC++ + Y + +N
Sbjct: 5 TPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNF 64
Query: 561 --NDNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVELIQCEYLSPMSLETI 734
+++ +LF D TRL I LR + D+ + + E+ L CE LS SL+T+
Sbjct: 65 EPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTL 124
Query: 735 NRNSRNLVSLKFGPATHVLAQDES 806
S LVSL T++ ++E+
Sbjct: 125 RSFSHTLVSLSLFGCTNIFYEEEN 148
>AL441992-8|CAI15408.1| 165|Homo sapiens zer-1 homolog (C. elegans)
protein.
Length = 165
Score = 67.3 bits (157), Expect = 7e-11
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = +3
Query: 393 SPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIY-QRINRI--- 560
+P+SL+ +C ++ + +L+ +L DI LP+EIC++ + Y + +N
Sbjct: 5 TPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNF 64
Query: 561 --NDNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVELIQCEYLSPMSLETI 734
+++ +LF D TRL I LR + D+ + + E+ L CE LS SL+T+
Sbjct: 65 EPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTL 124
Query: 735 NRNSRNLVSLKFGPATHVLAQDES 806
S LVSL T++ ++E+
Sbjct: 125 RSFSHTLVSLSLFGCTNIFYEEEN 148
>AL441992-7|CAI15407.1| 766|Homo sapiens zer-1 homolog (C. elegans)
protein.
Length = 766
Score = 67.3 bits (157), Expect = 7e-11
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = +3
Query: 393 SPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIY-QRINRI--- 560
+P+SL+ +C ++ + +L+ +L DI LP+EIC++ + Y + +N
Sbjct: 5 TPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNF 64
Query: 561 --NDNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVELIQCEYLSPMSLETI 734
+++ +LF D TRL I LR + D+ + + E+ L CE LS SL+T+
Sbjct: 65 EPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTL 124
Query: 735 NRNSRNLVSLKFGPATHVLAQDES 806
S LVSL T++ ++E+
Sbjct: 125 RSFSHTLVSLSLFGCTNIFYEEEN 148
>AL441992-9|CAI15409.1| 101|Homo sapiens zer-1 homolog (C. elegans)
protein.
Length = 101
Score = 41.9 bits (94), Expect = 0.003
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +3
Query: 393 SPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIY-QRINRI--- 560
+P+SL+ +C ++ + +L+ +L DI LP+EIC++ + Y + +N
Sbjct: 5 TPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNF 64
Query: 561 --NDNIANLFRDRFRTRLDAIKLRNSRITDE 647
+++ +LF D TRL I LR + D+
Sbjct: 65 EPHESFFSLFSDPRSTRLTRIHLREDLVQDQ 95
>AB051517-1|BAB21821.1| 787|Homo sapiens KIAA1730 protein protein.
Length = 787
Score = 41.1 bits (92), Expect = 0.005
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +3
Query: 378 SLYDTSPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIYQRINR 557
++ + SP SLL+ICL +L HL L+E + P E+ ++ L
Sbjct: 52 AMEEASPYSLLDICLNFLTTHLEKFCSA-RQDGTLCLQEPGVFPQEVADRLLRTMAFHGL 110
Query: 558 INDNIANLFRDRFRTRLDAIKLRNSRITDEGFR-FLMEHKPQEVE 689
+ND +FR + RL +R ++I+ FR HK E++
Sbjct: 111 LNDGTVGIFRGN-QMRLKRACIRKAKISAVAFRKAFCHHKLVELD 154
>AF098638-1|AAC70781.1| 829|Homo sapiens rabaptin-4 protein.
Length = 829
Score = 33.9 bits (74), Expect = 0.78
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Frame = +3
Query: 366 AEITSLYDTSPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDII-----LPAEIC--E 524
AE L DT+ ++L E+ L+Y + +N+ T DH KLK +I+ + AE C E
Sbjct: 665 AEDFILPDTT-EALRELVLKYREDIINVRTAADHVE--EKLKAEILFLKEQIQAEQCLKE 721
Query: 525 KFLEIYQ-RINRINDNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVE 689
E Q I + IA++ + L+ IK+ + T E F ++K Q ++
Sbjct: 722 NLEETLQLEIENCKEEIASI--SSLKAELERIKVEKGQATVEQLMFEEKNKAQRLQ 775
>AY499342-1|AAS86447.1| 662|Homo sapiens interleukin 31RA splice
variant x4 protein.
Length = 662
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 874 PRLCIVSLRSLGAKIMKPRCLYALSS*ARTCVAGPNLRETKFLLFLFIVSSDIGERYSHC 695
P LC SL +L AK C+Y TC P +ET + + + GE++ +C
Sbjct: 24 PSLCKFSLAALPAKPENISCVYYYRK-NLTCTWSPG-KETSYTQYTVKRTYAFGEKHDNC 81
Query: 694 MSSTS 680
+++S
Sbjct: 82 TTNSS 86
>AY499341-1|AAS86446.1| 764|Homo sapiens interleukin 31RA splice
variant x3 protein.
Length = 764
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 874 PRLCIVSLRSLGAKIMKPRCLYALSS*ARTCVAGPNLRETKFLLFLFIVSSDIGERYSHC 695
P LC SL +L AK C+Y TC P +ET + + + GE++ +C
Sbjct: 43 PSLCKFSLAALPAKPENISCVYYYRK-NLTCTWSPG-KETSYTQYTVKRTYAFGEKHDNC 100
Query: 694 MSSTS 680
+++S
Sbjct: 101 TTNSS 105
>AY499340-1|AAS86445.1| 324|Homo sapiens interleukin 31RA splice
variant x2 protein.
Length = 324
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 874 PRLCIVSLRSLGAKIMKPRCLYALSS*ARTCVAGPNLRETKFLLFLFIVSSDIGERYSHC 695
P LC SL +L AK C+Y TC P +ET + + + GE++ +C
Sbjct: 11 PSLCKFSLAALPAKPENISCVYYYRK-NLTCTWSPG-KETSYTQYTVKRTYAFGEKHDNC 68
Query: 694 MSSTS 680
+++S
Sbjct: 69 TTNSS 73
>AY499339-1|AAS86444.1| 649|Homo sapiens interleukin 31RA splice
variant x1 protein.
Length = 649
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 874 PRLCIVSLRSLGAKIMKPRCLYALSS*ARTCVAGPNLRETKFLLFLFIVSSDIGERYSHC 695
P LC SL +L AK C+Y TC P +ET + + + GE++ +C
Sbjct: 11 PSLCKFSLAALPAKPENISCVYYYRK-NLTCTWSPG-KETSYTQYTVKRTYAFGEKHDNC 68
Query: 694 MSSTS 680
+++S
Sbjct: 69 TTNSS 73
>AY358740-1|AAQ89100.1| 582|Homo sapiens GLM-R protein.
Length = 582
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 874 PRLCIVSLRSLGAKIMKPRCLYALSS*ARTCVAGPNLRETKFLLFLFIVSSDIGERYSHC 695
P LC SL +L AK C+Y TC P +ET + + + GE++ +C
Sbjct: 43 PSLCKFSLAALPAKPENISCVYYYRK-NLTCTWSPG-KETSYTQYTVKRTYAFGEKHDNC 100
Query: 694 MSSTS 680
+++S
Sbjct: 101 TTNSS 105
>AY358117-1|AAQ88484.1| 732|Homo sapiens GLM-R protein.
Length = 732
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 874 PRLCIVSLRSLGAKIMKPRCLYALSS*ARTCVAGPNLRETKFLLFLFIVSSDIGERYSHC 695
P LC SL +L AK C+Y TC P +ET + + + GE++ +C
Sbjct: 11 PSLCKFSLAALPAKPENISCVYYYRK-NLTCTWSPG-KETSYTQYTVKRTYAFGEKHDNC 68
Query: 694 MSSTS 680
+++S
Sbjct: 69 TTNSS 73
>AF486620-1|AAM27958.1| 732|Homo sapiens gp130-like monocyte
receptor protein.
Length = 732
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 874 PRLCIVSLRSLGAKIMKPRCLYALSS*ARTCVAGPNLRETKFLLFLFIVSSDIGERYSHC 695
P LC SL +L AK C+Y TC P +ET + + + GE++ +C
Sbjct: 11 PSLCKFSLAALPAKPENISCVYYYRK-NLTCTWSPG-KETSYTQYTVKRTYAFGEKHDNC 68
Query: 694 MSSTS 680
+++S
Sbjct: 69 TTNSS 73
>AF106913-1|AAL36452.1| 509|Homo sapiens CRL3 protein protein.
Length = 509
Score = 30.3 bits (65), Expect = 9.7
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 874 PRLCIVSLRSLGAKIMKPRCLYALSS*ARTCVAGPNLRETKFLLFLFIVSSDIGERYSHC 695
P LC SL +L AK C+Y TC P +ET + + + GE++ +C
Sbjct: 24 PSLCKFSLAALPAKPENISCVYYYRK-NLTCTWSPG-KETSYTQYTVKRTYAFGEKHDNC 81
Query: 694 MSSTS 680
+++S
Sbjct: 82 TTNSS 86
>AB033065-1|BAA86553.2| 1164|Homo sapiens KIAA1239 protein protein.
Length = 1164
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 652 FDSLWSTNRRKLNSYNANISLQCHWKQ*TE 741
F++ T+R K NSY IS+ C W++ TE
Sbjct: 1088 FNNATHTSRPKCNSYCFKISVDCLWRESTE 1117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,180,304
Number of Sequences: 237096
Number of extensions: 2356119
Number of successful extensions: 4337
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4331
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -