Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_P02
(881 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128434-1|AAM75027.1| 793|Drosophila melanogaster LD02105p pro... 93 6e-19
AE014296-258|AAF47500.2| 793|Drosophila melanogaster CG12084-PA... 93 6e-19
BT024267-1|ABC86329.1| 604|Drosophila melanogaster IP15590p pro... 31 1.6
AE014297-4453|AAF56952.3| 604|Drosophila melanogaster CG31033-P... 31 1.6
U67066-1|AAB17271.1| 264|Drosophila melanogaster U2 snRNP auxil... 30 3.7
AY058537-1|AAL13766.1| 264|Drosophila melanogaster LD24048p pro... 30 3.7
AE014134-79|AAF51512.1| 264|Drosophila melanogaster CG3582-PA p... 30 3.7
AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein. 29 6.4
AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA... 29 6.4
AE014296-1310|AAF50522.2| 972|Drosophila melanogaster CG8492-PA... 29 6.4
U34925-2|AAC46881.1| 2354|Drosophila melanogaster MEI-41 protein. 29 8.5
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P... 29 8.5
>AY128434-1|AAM75027.1| 793|Drosophila melanogaster LD02105p
protein.
Length = 793
Score = 92.7 bits (220), Expect = 6e-19
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Frame = +3
Query: 387 DTSPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIYQRINR-IN 563
D P +L EI + L +L+I++ R L I+LP EIC+ FLE YQR NR ++
Sbjct: 14 DEEPLTLKEIAYQKLCNNLDIISS-HRPDGQRGLNPGIVLPNEICDGFLENYQRFNRPLD 72
Query: 564 DNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVELIQCEYLSPMSLETINRN 743
D++ LF D RT L + LRNS ++ G LM HK + L C+ +S S +
Sbjct: 73 DSVIRLFEDTHRTSLKIVNLRNSTLSSIGLETLMRHKLFALSLWYCDMISVGSHHLLAHY 132
Query: 744 SRNLVSLKFGPATHVLAQDESAYKQR-GFIIFAPRLRRLTIH 866
+L SL+ G ++H+L E K+ F + P LRRL ++
Sbjct: 133 GDSLRSLELGISSHLLQYAEPNEKEPVDFQLTCPHLRRLVLN 174
>AE014296-258|AAF47500.2| 793|Drosophila melanogaster CG12084-PA
protein.
Length = 793
Score = 92.7 bits (220), Expect = 6e-19
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Frame = +3
Query: 387 DTSPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIYQRINR-IN 563
D P +L EI + L +L+I++ R L I+LP EIC+ FLE YQR NR ++
Sbjct: 14 DEEPLTLKEIAYQKLCNNLDIISS-HRPDGQRGLNPGIVLPNEICDGFLENYQRFNRPLD 72
Query: 564 DNIANLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVELIQCEYLSPMSLETINRN 743
D++ LF D RT L + LRNS ++ G LM HK + L C+ +S S +
Sbjct: 73 DSVIRLFEDTHRTSLKIVNLRNSTLSSIGLETLMRHKLFALSLWYCDMISVGSHHLLAHY 132
Query: 744 SRNLVSLKFGPATHVLAQDESAYKQR-GFIIFAPRLRRLTIH 866
+L SL+ G ++H+L E K+ F + P LRRL ++
Sbjct: 133 GDSLRSLELGISSHLLQYAEPNEKEPVDFQLTCPHLRRLVLN 174
>BT024267-1|ABC86329.1| 604|Drosophila melanogaster IP15590p
protein.
Length = 604
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 519 CEKFLEIYQRINRINDNIANLFRDRFRTRLDAIKLRNS 632
C+ F EI ++ NR+ D++A L D + ++ +LRN+
Sbjct: 24 CDNFKEIIEQNNRLIDHVAQLKADNLKISVENEQLRNA 61
>AE014297-4453|AAF56952.3| 604|Drosophila melanogaster CG31033-PC,
isoform C protein.
Length = 604
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 519 CEKFLEIYQRINRINDNIANLFRDRFRTRLDAIKLRNS 632
C+ F EI ++ NR+ D++A L D + ++ +LRN+
Sbjct: 24 CDNFKEIIEQNNRLIDHVAQLKADNLKISVENEQLRNA 61
>U67066-1|AAB17271.1| 264|Drosophila melanogaster U2 snRNP
auxiliary factor protein.
Length = 264
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 685 TSCGLCSIRNRNPSSVMRELRSFMASRRVRNRSRNK 578
T G C+ + P S RELR ++ SRR R RSR++
Sbjct: 166 TRSGFCNFMHLKPIS--RELRRYLYSRRRRARSRSR 199
>AY058537-1|AAL13766.1| 264|Drosophila melanogaster LD24048p
protein.
Length = 264
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 685 TSCGLCSIRNRNPSSVMRELRSFMASRRVRNRSRNK 578
T G C+ + P S RELR ++ SRR R RSR++
Sbjct: 166 TRSGFCNFMHLKPIS--RELRRYLYSRRRRARSRSR 199
>AE014134-79|AAF51512.1| 264|Drosophila melanogaster CG3582-PA
protein.
Length = 264
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 685 TSCGLCSIRNRNPSSVMRELRSFMASRRVRNRSRNK 578
T G C+ + P S RELR ++ SRR R RSR++
Sbjct: 166 TRSGFCNFMHLKPIS--RELRRYLYSRRRRARSRSR 199
>AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein.
Length = 2517
Score = 29.5 bits (63), Expect = 6.4
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -2
Query: 673 LCSIRNRNPSSVMRELRSFMASRRVRNRSRNKLAILSLMRLIRWYISRNFSHISAGSIMS 494
LC+IR PSSV +++SF A + +R + + L + YIS I +M
Sbjct: 503 LCAIRLETPSSVHTQMQSFYAQQYMRLFQSEETQEIFCSNLPQLYIS---GFIKPEQLMK 559
Query: 493 SL-SFRQRVV*SKSVTILRCS 434
+L + R ++ + +L CS
Sbjct: 560 ALPTINNRSGRAQVIRLLLCS 580
>AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA
protein.
Length = 2517
Score = 29.5 bits (63), Expect = 6.4
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -2
Query: 673 LCSIRNRNPSSVMRELRSFMASRRVRNRSRNKLAILSLMRLIRWYISRNFSHISAGSIMS 494
LC+IR PSSV +++SF A + +R + + L + YIS I +M
Sbjct: 503 LCAIRLETPSSVHTQMQSFYAQQYMRLFQSEETQEIFCSNLPQLYIS---GFIKPEQLMK 559
Query: 493 SL-SFRQRVV*SKSVTILRCS 434
+L + R ++ + +L CS
Sbjct: 560 ALPTINNRSGRAQVIRLLLCS 580
>AE014296-1310|AAF50522.2| 972|Drosophila melanogaster CG8492-PA
protein.
Length = 972
Score = 29.5 bits (63), Expect = 6.4
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 261 FLPTYTMKSFHK*TTHFYRTKTLFRSN 181
+LPTY+ +F+ T + Y +KT++ +N
Sbjct: 848 YLPTYSYTNFNHPTPNLYNSKTIYNNN 874
>U34925-2|AAC46881.1| 2354|Drosophila melanogaster MEI-41 protein.
Length = 2354
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -2
Query: 673 LCSIRNRNPSSVMRELRSFMASRRVRNRSRNKLAILSLMRLIRWYISRNFSHISAGSIMS 494
LC+IR PSSV +++SF A + +R + + L + YIS I +M
Sbjct: 340 LCAIRLETPSSVHTQMQSFYAQQYMRLFQSEETQEIFCSNLPQLYIS---GFIKPEQLMK 396
Query: 493 SL-SFRQRVV*SKSVTILRCS 434
+L + R ++ + +L CS
Sbjct: 397 ALPTINNRGGRAQVIRLLLCS 417
>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
isoform B protein.
Length = 4374
Score = 29.1 bits (62), Expect = 8.5
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Frame = +3
Query: 324 IVSRFKDRMAHKVVAEITSLYDTSPDSLLEICLEYLVEHLNIVTDLDHTTRWRKLKEDII 503
I + +MAH + ++ + T PD ++E+ D ++T +
Sbjct: 469 INEKLTKQMAHDWMTALSFI--TRPDEETLETFHSILEYAKNRLDAEYTLGATAVVHSFC 526
Query: 504 LPAEICEKFLEIYQRINRIND---NIANLFRDRFRTR 605
E CE+ L + Q IN + N+ NLF+ RTR
Sbjct: 527 KHHEACEENLRVQQIINLLETEFLNLYNLFKGERRTR 563
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,467,392
Number of Sequences: 53049
Number of extensions: 752147
Number of successful extensions: 2195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -