Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_P02
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-7|CAA19452.1|  881|Caenorhabditis elegans Hypothetical ...    37   0.022
AF039041-2|AAP46270.1|  587|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z54237-1|CAA90987.2|  445|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z83744-2|CAB06039.1|  430|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U53339-5|AAA96201.1|  342|Caenorhabditis elegans Serpentine rece...    29   5.8  
U40952-2|AAA81737.1|  818|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U80029-10|AAB37589.1|  460|Caenorhabditis elegans Hypothetical p...    28   7.7  

>AL023828-7|CAA19452.1|  881|Caenorhabditis elegans Hypothetical
           protein Y17G7B.5a protein.
          Length = 881

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 20/71 (28%), Positives = 37/71 (52%)
 Frame = -2

Query: 697 CMSSTSCGLCSIRNRNPSSVMRELRSFMASRRVRNRSRNKLAILSLMRLIRWYISRNFSH 518
           C ++    L S  N   +S+MR ++   +     NRS N+L +  L +LIR  +    + 
Sbjct: 765 CAAAIRVMLESFVNTQKASIMRMMKKTFSRHLTENRSANELLLFILKQLIRQQMHYATAR 824

Query: 517 ISAGSIMSSLS 485
            +AG+I+ S++
Sbjct: 825 AAAGTILQSVT 835


>AF039041-2|AAP46270.1|  587|Caenorhabditis elegans Hypothetical
           protein W03F8.10 protein.
          Length = 587

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
 Frame = +3

Query: 390 TSPDSLLEICLEYLVEHLNIVTDLDHTTRW-RKLKEDIILPAEICEKFLE-----IYQRI 551
           T+ D+ L        ++  I TDL+  T    K  E  + P +  EK  E     +YQ  
Sbjct: 478 TTVDAALAAATNAEQKNKQIQTDLERATELLEKRMEGNVAPQQRAEKLRERAAKLLYQA- 536

Query: 552 NRINDNIANLFRDRFRTRLD 611
            R ND+I NL +D    RLD
Sbjct: 537 QRHNDDIDNLSKDSTEMRLD 556


>Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical
           protein F10C2.4 protein.
          Length = 1081

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
 Frame = +3

Query: 402 SLLEICLEYLVEHLNIVT--DLDHTTRWRKLKEDIILPAEICEKFLEIYQRINRINDNIA 575
           ++L   L Y+++   +++   + H  R +K K  ++  A I  K  ++  R+N+  D   
Sbjct: 367 NILNFDLPYILDRAKVLSLPQVSHLGR-QKEKGSVVRDAAISSK--QMGSRVNKSIDIHG 423

Query: 576 NLFRDRFRTRLDAIKLRNSRITDEGFRFLMEHKPQEVE 689
            +  D  +  L   KLR+  +    ++FL E K ++VE
Sbjct: 424 RIIFDVLQVVLRDYKLRSYTLNSVSYQFLSEQK-EDVE 460


>Z54237-1|CAA90987.2|  445|Caenorhabditis elegans Hypothetical
           protein T11B7.1 protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +3

Query: 435 EHLNIVTDLDHTTRWRKLKEDIILPAEICEKFLEIYQRINRINDNIANLFRDRFRTRLDA 614
           EHL  +  LD T   +KLK D +  A +  K   +    + + DN A+L  D F  +++ 
Sbjct: 88  EHLETIQKLDSTLSRQKLKYDDMRQA-LSVKIYTLENECSNLQDNYADLQND-FEVQIEK 145

Query: 615 IK 620
            K
Sbjct: 146 FK 147


>Z83744-2|CAB06039.1|  430|Caenorhabditis elegans Hypothetical
           protein C06A12.5 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
 Frame = +3

Query: 516 ICEKFLEIYQRINRINDNIANLFRDRFRTRLDAIKLRNSRITD-EGFRFLMEHKPQEVEL 692
           + + FL  +   N  +DN+     +RF T L+A +    +  + EG  F + +K +EV  
Sbjct: 19  VVQPFLSCWLTPNVNDDNVNGYVDERFETVLEAFRRNFGQGEEREGAAFAVYYKGKEVVN 78

Query: 693 IQCEYLSPMSLETINRNSRNLVSLKFGPATHVLAQDESAYKQRGFIIFAPRL 848
           +   Y      E+  + S N  S+ F  +  V +   +    RG + +A R+
Sbjct: 79  LWGGYADK---ESGRKWSENTKSVMFSASKAVCSIVIAVMVDRGLLNYADRV 127


>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
           protein F21C10.7 protein.
          Length = 2541

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
 Frame = +3

Query: 324 IVSRFKDRMAHKVVAEITSLYDTSPDSLLEICLEY----LVEHLNIVTDLDHTTRWRKLK 491
           ++SR     A K       +YD    SL E+C+ +    ++  L+I   ++  + WR L 
Sbjct: 100 LLSRADSLGAEKTNPNEAIVYDEMAKSLREVCMHFGFFSILTQLHINQPINLRSTWRSLN 159

Query: 492 EDIILPAEICEKFLEIY 542
             ++L   +  + ++ Y
Sbjct: 160 RQLLLRGYMLRETVQFY 176


>U53339-5|AAA96201.1|  342|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 16 protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = -1

Query: 737 VYCFQ*HWREIFALYEFNFLRFV-LHKESKSLISDAGIT*FYGVEACTKSIAKQVSNIVV 561
           ++CF   +  I AL     +RFV   +ES+  IS +G   F  VE    +     S +++
Sbjct: 192 IFCF---FLAILALILLQVVRFVNKRRESRIEISLSGR--FQIVENIDTTTFIS-SILII 245

Query: 560 NAIDSLVYF*KFFTYFSRKYYVFLEFSPASCMIQICYYI 444
           N I S++Y    FT  + ++  F+   PA   ++  +Y+
Sbjct: 246 NMIMSVIYIVGTFTLRNFQFDAFINNQPALATVKTIFYL 284


>U40952-2|AAA81737.1|  818|Caenorhabditis elegans Hypothetical
           protein C03B1.7 protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 294 INSFAAHNY*IVSRFKDRMAHKVVAEITSLYDTSPDSLL 410
           I++   H+Y    +  DR +H++    T +Y+TS  SL+
Sbjct: 755 IDTRIVHHYERFKKLADRESHRIAKSWTKIYETSSYSLM 793


>U80029-10|AAB37589.1|  460|Caenorhabditis elegans Hypothetical
           protein T20D4.8 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
 Frame = +3

Query: 396 PDSLLEICLEYLVEHLNIVT-DLDHTTRWRKLKEDIILPAEICEKFLEIYQRINRINDNI 572
           PDSL+   L+  +E LN  T D D+   + K+  + +      EKF  + + +  +N  +
Sbjct: 79  PDSLMIWYLK--IELLNTTTADFDY---FFKMHSEYVKKENKSEKFSFVMETLENVNVTL 133

Query: 573 ANLFRDRFRTRLDAIKLRNSRITDEGFRFL 662
            N+F +     ++ +   N    +E  +FL
Sbjct: 134 TNIFYNYLHANIEVLNQLNLPAAEEN-KFL 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,520,670
Number of Sequences: 27780
Number of extensions: 404738
Number of successful extensions: 1174
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)