Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_O20
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 3.7
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 3.7
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 3.7
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 4.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.5
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.0 bits (47), Expect = 3.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 213 VLCVAMMVIYCSAQRSPYAGR 275
VL VA+ I C AQ + YAGR
Sbjct: 6 VLLVALAAI-CGAQGASYAGR 25
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.0 bits (47), Expect = 3.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 213 VLCVAMMVIYCSAQRSPYAGR 275
VL VA+ I C AQ + YAGR
Sbjct: 6 VLLVALAAI-CGAQGASYAGR 25
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.0 bits (47), Expect = 3.7
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 320 FWGCRALNCRKTYWLSS-SVWRTLG*AVNNHHSYAENCNLHDANCLQTKI 174
+W + NC Y S S W + HH++ + C+++D N T++
Sbjct: 104 YWNTK--NCVNPYDRDSLSCWLQM----TKHHNFIKVCSVNDVNMTITEL 147
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2
Query: 323 VFWGCRALNCRKTYWLSSSVWR 258
++WG A N TY +S W+
Sbjct: 231 LWWGWLAFNSGSTYGVSGQRWQ 252
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 166 NNNHEILTANLWKSIELISKNSXRND 89
+ ++ILT N W +E + N N+
Sbjct: 27 DEKNQILTTNAWLKLEWVDYNLQWNE 52
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 166 NNNHEILTANLWKSIELISKNSXRND 89
+ ++ILT N W +E + N N+
Sbjct: 27 DEKNQILTTNAWLKLEWVDYNLQWNE 52
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 166 NNNHEILTANLWKSIELISKNSXRND 89
+ ++ILT N W +E + N N+
Sbjct: 27 DEKNQILTTNAWLKLEWVDYNLQWNE 52
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 166 NNNHEILTANLWKSIELISKNSXRND 89
+ ++ILT N W +E + N N+
Sbjct: 27 DEKNQILTTNAWLKLEWVDYNLQWNE 52
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 166 NNNHEILTANLWKSIELISKNSXRND 89
+ ++ILT N W +E + N N+
Sbjct: 27 DEKNQILTTNAWLKLEWVDYNLQWNE 52
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 166 NNNHEILTANLWKSIELISKNSXRND 89
+ ++ILT N W +E + N N+
Sbjct: 27 DEKNQILTTNAWLKLEWVDYNLQWNE 52
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 166 NNNHEILTANLWKSIELISKNSXRND 89
+ ++ILT N W +E + N N+
Sbjct: 95 DEKNQILTTNAWLKLEWVDYNLQWNE 120
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 166 NNNHEILTANLWKSIELISKNSXRND 89
+ ++ILT N W +E + N N+
Sbjct: 95 DEKNQILTTNAWLKLEWVDYNLQWNE 120
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,356
Number of Sequences: 438
Number of extensions: 3641
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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