Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_O17
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 46 7e-06
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 45 2e-05
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 38 0.001
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 36 0.010
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 32 0.095
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 31 0.29
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.89
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 29 0.89
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 28 1.6
SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit... 27 2.7
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 27 2.7
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 27 2.7
SPCC14G10.03c |ump1||proteasome maturation factor Ump1 |Schizosa... 27 3.6
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 27 4.7
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 4.7
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 4.7
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 4.7
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 26 8.3
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.0 bits (104), Expect = 7e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 596 KLFHCPHCRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRHLDALH 760
K F CP C K + H+ +H S+KPF C IC + F ++ +LR+H + LH
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH-ERLH 473
Score = 35.9 bits (79), Expect = 0.008
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 674 PSQKPFRCQICLEPFHKKSHLRRHLDALHT 763
P K F C C + F + HLRRH+ +LHT
Sbjct: 418 PGGKSFVCPECSKKFKRSEHLRRHIRSLHT 447
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 44.8 bits (101), Expect = 2e-05
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Frame = +2
Query: 593 RKLFHCPH--CRKSY--PTILEFNTHLTGVHPSQKPFRCQI--CLEPFHKKSHLRRH 745
+K+FHCP+ C K Y P++LE HL H +++PF C C + F++KSHL+ H
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLE--QHLR-THSNERPFVCDYTGCSKAFYRKSHLKIH 73
Score = 42.7 bits (96), Expect = 7e-05
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 593 RKLFHCPH--CRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRHLD 751
RK +HCP C+KS+ H++ +H F C C F K L+RHL+
Sbjct: 233 RKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLE 287
Score = 33.5 bits (73), Expect = 0.041
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 605 HCPHCRKSYPTILEFNTHLTGVHPSQKPFRC--QICLEPFHKKSHLRRHLDALHT 763
H C + T H+ VH KP+ C + C E F K LR H+ A HT
Sbjct: 86 HYDGCDAQFYTQQHLERHIE-VHRKPKPYACTWEGCDECFSKHQQLRSHISACHT 139
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 617 CRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRHLDALHTR-KDVTSVQCV 793
C K + +H+ H + +PF+C IC + F ++ RRH + LHT K V C
Sbjct: 577 CNKRFTRAYNLKSHMN-THTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCN 634
Query: 794 Q 796
Q
Sbjct: 635 Q 635
Score = 29.9 bits (64), Expect = 0.51
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 602 FHCPHCRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRH 745
F C C+KS+ + H +H K F C C + F + L RH
Sbjct: 600 FQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 35.5 bits (78), Expect = 0.010
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 602 FHC--PHCRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRHLDALHTRK 769
F+C P C KS+ H H + K F C C F + L RH+ +H +K
Sbjct: 26 FYCTYPDCPKSFTRKEHLRRH-ERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 32.3 bits (70), Expect = 0.095
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 617 CRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRHL 748
C K +H+ H S +P+RC +C F + L+RHL
Sbjct: 450 CNKRIARKYNVESHIQ-THLSDRPYRCDLCKAGFVRHHDLKRHL 492
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 30.7 bits (66), Expect = 0.29
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 617 CRKSYPTILEFNTHLTGVHPSQKP-FRCQICLEPFHKKSH--LRRHLDALHTR 766
C + + H +H +P FRC+IC + H H L RHL H R
Sbjct: 585 CNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKHGR 637
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 29.1 bits (62), Expect = 0.89
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 617 CRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRHLDALHTRKD 772
C KS+ H H + K F C C F + L RH++ H +++
Sbjct: 24 CTKSFTRKEHARRHFRS-HTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQN 74
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 596 KLFHCPHCRKSYPTILEFNTHLTGVHPSQKPFRCQICLEPFHKKS 730
K F CPHC S+ N H+ H Q Q P H K+
Sbjct: 45 KAFICPHCSSSFTRSDVLNRHVNQKHVKQNDAGSQ--THPKHDKT 87
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 29.1 bits (62), Expect = 0.89
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 638 ILEFNTHLTGVHPSQKPFRCQICLEPFHKKSHLRRHL-DALHTRKDVTSVQCVQVYXDKS 814
I+ N L + + FRC C P K LR H+ + H R D S + + Y
Sbjct: 129 IVYINRLLEKIKNELESFRCLCCHVPCKNKKLLREHMNNKRHFRLDPKSSEYDEFYI--I 186
Query: 815 XYVSICRSI 841
Y S+ +SI
Sbjct: 187 NYASVTKSI 195
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 28.3 bits (60), Expect = 1.6
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +2
Query: 683 KPFRCQICLEPFHKKSHLRRHL 748
+P++C +C + F++ H RH+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHI 45
>SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit
Rrn7 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -3
Query: 710 QGIFGI*MVFVMDEHLSSGY*TPILLDNFFYNEG---NEIACGKLLR*SHKMDLSNRHKK 540
+GI + + D HL T IL D E ++ ++ S KMD S R
Sbjct: 426 EGILNVFPILSKDSHLQENQPTDILTDESVIAEDVKLEQVFKPVGIKESDKMDFSRRKDA 485
Query: 539 YLSLL 525
Y+S+L
Sbjct: 486 YISML 490
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1428
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +1
Query: 112 LYVLKLNHKKCLKGIKKVVIRSWIRVTMKTSYRITVYLNQAEVNKNCQVSLXYSNAETQT 291
+ V+ L+ + +K VV +RV T +++ EVN ++ SN T
Sbjct: 178 IVVIPLSPSSSSESLKLVVNEEKVRVAFTTEATYRIFIKDTEVNNAKSLAWWKSNDFTNY 237
Query: 292 KPSDIK 309
K IK
Sbjct: 238 KFEQIK 243
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 27.5 bits (58), Expect = 2.7
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 109 ELYVLKLNHKKCLKGIKKVVIRSWIRVTMKTSYRITVYLNQAEVNKNCQVSLXYSNAETQ 288
EL +++ N+ K K + I+ WIRVT K + + E+ ++ NA T
Sbjct: 35 ELRIIEPNNDCLTKLDKDIRIQGWIRVTTKFLQGKSGSVKVQEIPQDQLPKSSSDNAVTD 94
Query: 289 TK---PSDIKGQNAVQSGLGVWH 348
K PS I Q +++ V++
Sbjct: 95 RKTISPSGINNQYVIRNPKDVYY 117
>SPCC14G10.03c |ump1||proteasome maturation factor Ump1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 129
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 380 LETHQIKMNLQRTQIKLKSSRNPLEHVPPXHDPLQNELEQFQAGTSTPPVGI 535
LE+ Q+ QI+L S R + H+P++ E+EQ A S+ P+ +
Sbjct: 38 LESRLKNWEAQQQQIRLDSMRR----IYGLHEPVRREMEQKLASQSSRPLAL 85
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 683 KPFRCQICLEPFHKKSHLRRHLDALHT 763
K + C C FH++ H RH+ + HT
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRS-HT 27
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 90 KVKYLIGIVCTKA*SQEMSKRDQESSDKKLDTSDYENLISHHSIFESS 233
KV + + + C + ++EMSK + ++K +Y+N +S ++ E +
Sbjct: 137 KVDHPLCVECAELLTEEMSKTLRALKEEKKMYFNYDNFLSSQTVHEEN 184
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 683 KPFRCQICLEPFHKKSHLRRHLDALHTRK 769
K + C+ C F + HL+RH+ + HT +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRS-HTNE 95
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +2
Query: 683 KPFRCQICLEPFHKKSHLRRHLDALHTRKDVTSVQ 787
KP+RC++C + + + L+ H H + + Q
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQ 431
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 373 STSRNTPDQDEFAENSDQAKVKQEPSGACSPXT 471
S + NT + EN+ AK KQ+ S A SP T
Sbjct: 722 SKTNNTVNNAANTENNTLAKDKQQTSEASSPGT 754
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,584,789
Number of Sequences: 5004
Number of extensions: 73188
Number of successful extensions: 222
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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