Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_O16
(917 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.054
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.054
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.054
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.071
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.071
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.071
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.094
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.094
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 34 0.16
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 34 0.16
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 34 0.16
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 32 0.50
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 32 0.50
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 0.87
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.0
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.0
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 2.0
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 2.0
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.7
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.5
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 27 4.4
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 4.7
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.7
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 4.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 6.5
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 28 8.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.1
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 8.1
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 28 8.1
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 28 8.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.054
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXX------PXPXPSGXGXGXPPP 553
P PG G PP P P P PPP P P P G G PPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXP 577
P P +G PP P P PPP P SG PPP GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +1
Query: 475 LGPXPVXPPXXPXPXAFXXGXXXXPPPRGXXXXPPNXGXTPXKXFXPK--XPQXXXXXXX 648
L P PP P P PPP PP G P P P
Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 649 AXXGAFFPXAPPP*XXFXKFXPXFXGGXPPR 741
G P PPP F P PP+
Sbjct: 779 GFKGG--PPPPPPPGMFAPMAPVIPDYLPPK 807
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P P PP P P G PP GG P G P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQG 559
P P SG PP P G PPP P P G PPP G
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCP-------PPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.054
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXX------PXPXPSGXGXGXPPP 553
P PG G PP P P P PPP P P P G G PPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXP 577
P P +G PP P P PPP P SG PPP GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +1
Query: 475 LGPXPVXPPXXPXPXAFXXGXXXXPPPRGXXXXPPNXGXTPXKXFXPK--XPQXXXXXXX 648
L P PP P P PPP PP G P P P
Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 649 AXXGAFFPXAPPP*XXFXKFXPXFXGGXPPR 741
G P PPP F P PP+
Sbjct: 779 GFKGG--PPPPPPPGMFAPMAPVIPDYLPPK 807
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P P PP P P G PP GG P G P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQG 559
P P SG PP P G PPP P P G PPP G
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCP-------PPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.054
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXX------PXPXPSGXGXGXPPP 553
P PG G PP P P P PPP P P P G G PPP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXP 577
P P +G PP P P PPP P SG PPP GG P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +1
Query: 475 LGPXPVXPPXXPXPXAFXXGXXXXPPPRGXXXXPPNXGXTPXKXFXPK--XPQXXXXXXX 648
L P PP P P PPP PP G P P P
Sbjct: 302 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Query: 649 AXXGAFFPXAPPP*XXFXKFXPXFXGGXPPR 741
G P PPP F P PP+
Sbjct: 362 GFKGG--PPPPPPPGMFAPMAPVIPDYLPPK 390
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P P PP P P G PP GG P G P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 335
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQG 559
P P SG PP P G PPP P P G PPP G
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCP-------PPPPPPPPGGFKGGPPPPPPPG 374
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.071
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXF--WXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSX 571
P P +G PP P G P PPP P P G PP G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 572 XPQXRGXP 595
P RG P
Sbjct: 300 PPPPRGSP 307
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 446 PXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P P G P PP P P S PPPQ G S P G P
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 488 PXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P PPP P +G G PPP G S P G P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAG-SPPPPRTGSP 272
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.071
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXF--WXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSX 571
P P +G PP P G P PPP P P G PP G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 572 XPQXRGXP 595
P RG P
Sbjct: 321 PPPPRGSP 328
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 446 PXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P P G P PP P P S PPPQ G S P G P
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 488 PXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P PPP P +G G PPP G S P G P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAG-SPPPPRTGSP 293
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.071
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXF--WXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSX 571
P P +G PP P G P PPP P P G PP G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 572 XPQXRGXP 595
P RG P
Sbjct: 306 PPPPRGSP 313
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 446 PXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P P G P PP P P S PPPQ G S P G P
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 488 PXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
P PPP P +G G PPP G S P G P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAG-SPPPPRTGSP 278
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.094
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 443 PPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
PP P G W P P PPP P P G PPP P G P
Sbjct: 287 PPPPPSSG--MWPPPPPPPPGR-TPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPP 553
P P + G PP P P PPP P PSG G PPP
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 740 GXXKXPXXXPXXTPPGPPXVPXXAXYRXPXXPFFPXGXGGXXFPXXPPXGFXPXXGXXP 916
G P P PGPP +P P F P G GG P PP G G P
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPP-PPPPSRFGPPGMGG--MPPPPPPGMRYPGGMPP 349
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/81 (28%), Positives = 25/81 (30%)
Frame = +1
Query: 496 PPXXPXPXAFXXGXXXXPPPRGXXXXPPNXGXTPXKXFXPKXPQXXXXXXXAXXGAFFPX 675
PP P P + PP G PP P P P G P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPP---PPPSSGMWPPPPPPPPGRTPGPPG--MPG 315
Query: 676 APPP*XXFXKFXPXFXGGXPP 738
PPP +F P GG PP
Sbjct: 316 MPPP-PPPSRFGPPGMGGMPP 335
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXP 577
P P G+ P P G + P PPP P +G G PPP P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRY--PGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Query: 578 QXRG 589
G
Sbjct: 376 SGHG 379
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPP-----PXXPXPXPSGXGXGXPPPQGG 562
P G + G PP P P P PP P P P SG PPP G
Sbjct: 247 PLMGMAQSGYQG-QYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 305
Query: 563 XSXXP 577
+ P
Sbjct: 306 RTPGP 310
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +2
Query: 428 SGLXXPPXPXXXGXXFWXPX-PXPPPXXPXPX--PSGXGXGXPPPQGG 562
SG+ PP P G P P PP P P G G PPP G
Sbjct: 293 SGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.094
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 443 PPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
PP P G W P P PPP P P G PPP P G P
Sbjct: 297 PPPPPSSG--MWPPPPPPPPGR-TPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPP 553
P P + G PP P P PPP P PSG G PPP
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 740 GXXKXPXXXPXXTPPGPPXVPXXAXYRXPXXPFFPXGXGGXXFPXXPPXGFXPXXGXXP 916
G P P PGPP +P P F P G GG P PP G G P
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPP-PPPPSRFGPPGMGG--MPPPPPPGMRYPGGMPP 359
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/81 (28%), Positives = 25/81 (30%)
Frame = +1
Query: 496 PPXXPXPXAFXXGXXXXPPPRGXXXXPPNXGXTPXKXFXPKXPQXXXXXXXAXXGAFFPX 675
PP P P + PP G PP P P P G P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPP---PPPSSGMWPPPPPPPPGRTPGPPG--MPG 325
Query: 676 APPP*XXFXKFXPXFXGGXPP 738
PPP +F P GG PP
Sbjct: 326 MPPP-PPPSRFGPPGMGGMPP 345
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXP 577
P P G+ P P G + P PPP P +G G PPP P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRY--PGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Query: 578 QXRG 589
G
Sbjct: 386 SGHG 389
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPP-----PXXPXPXPSGXGXGXPPPQGG 562
P G + G PP P P P PP P P P SG PPP G
Sbjct: 257 PLMGMAQSGYQG-QYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 315
Query: 563 XSXXP 577
+ P
Sbjct: 316 RTPGP 320
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +2
Query: 428 SGLXXPPXPXXXGXXFWXPX-PXPPPXXPXPX--PSGXGXGXPPPQGG 562
SG+ PP P G P P PP P P G G PPP G
Sbjct: 303 SGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXP-GGXAXL 721
G N GG G P+ G G G G GG G G G GG
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQ 277
Query: 720 EXGGEFXEXXSGGXGXW 670
+ GG + + GG G W
Sbjct: 278 QGGGGWGQQGGGGQGGW 294
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXP-GGXAXL 721
G N GG G P+ G G G G GG G G G GG
Sbjct: 180 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQ 239
Query: 720 EXGGEFXEXXSGGXGXW 670
+ GG + + GG G W
Sbjct: 240 QGGGGWGQQGGGGQGGW 256
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXP-GGXAXL 721
G N GG G P+ G G G G GG G G G GG
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQ 277
Query: 720 EXGGEFXEXXSGGXGXW 670
+ GG + + GG G W
Sbjct: 278 QGGGGWGQQGGGGQGGW 294
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 576 GXXXXPPWGGGXPXPXPEGXGXGXXGG-GNGXGXQXXXPXXXGXGG 442
G P WGGG P G G G GG G G G G GG
Sbjct: 41 GGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGG 86
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -3
Query: 594 GXPRIWGXXXXPPWGG-----GXPXPXPEGXGXGXXGGGNGXG 481
G P WG P +GG G P G G G GGG+G G
Sbjct: 23 GPPSPWGFRPSPFFGGRSGGWGRPGWGGGGPGWGRGGGGSGWG 65
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.50
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGP--GGVXXGXXXGXFXXPGGXAX 724
G N GG G P+ G G G G GG GG G GG
Sbjct: 180 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQ 239
Query: 723 LEXGGEFXEXXSGGXGXW 670
+ GG + + GG G W
Sbjct: 240 QQGGGGWGQQGGGGQGGW 257
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 32.3 bits (70), Expect = 0.50
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGP--GGVXXGXXXGXFXXPGGXAX 724
G N GG G P+ G G G G GG GG G GG
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQ 277
Query: 723 LEXGGEFXEXXSGGXGXW 670
+ GG + + GG G W
Sbjct: 278 QQGGGGWGQQGGGGQGGW 295
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXGXQXXXPXXXGXGG 442
GG P P P G G GGG G G G GG
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG 143
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXG 481
GG P P P G G GGG G G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCG 73
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXGXQXXXPXXXGXGG 442
GG P P P G G G GGG G G P GG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/74 (32%), Positives = 25/74 (33%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPGGXAXLE 718
G GG G PP+P G G G G GG GG G G GG
Sbjct: 62 GGGGCGGGGGCAPPPAPCG--GGCGGGGGGCGGGGGGCGG-GGGCGGGGGGCGGGGGGCG 118
Query: 717 XGGEFXEXXSGGXG 676
GG GG G
Sbjct: 119 GGGGGCGGGGGGCG 132
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXG 481
GG P P P G G G GGG G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGG 93
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQGG 562
P P PPP P P SG G GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGG 331
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXG 481
GGG P P G G GGG G G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCG 67
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXG 481
GGG P P G G GGG G G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCG 91
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQGG 562
P P PPP P P P G G G
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSG 329
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXGXQXXXPXXXGXGG 442
GG P P P G G G GGG G G P GG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/74 (32%), Positives = 25/74 (33%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPGGXAXLE 718
G GG G PP+P G G G G GG GG G G GG
Sbjct: 62 GGGGCGGGGGCAPPPAPCG--GGCGGGGGGCGGGGGGCGG-GGGCGGGGGGCGGGGGGCG 118
Query: 717 XGGEFXEXXSGGXG 676
GG GG G
Sbjct: 119 GGGGGCGGGGGGCG 132
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXG 481
GG P P P G G G GGG G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGG 93
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQGG 562
P P PPP P P SG G GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGG 331
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXG 481
GGG P P G G GGG G G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCG 67
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 552 GGGXPXPXPEGXGXGXXGGGNGXG 481
GGG P P G G GGG G G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCG 91
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQGG 562
P P PPP P P P G G G
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSG 329
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGV 775
G P GG G PP P G G G G G PG V
Sbjct: 193 GNTPSGGAAGPPGPPGPPGGPGNDGQ--PGGPGNPGAPGAV 231
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 476 WXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
+ P P PPP P P P P PQ PQ P
Sbjct: 95 YVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQP 134
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGV 775
G P GG G PP P G G G G G PG V
Sbjct: 199 GNTPSGGGEGPAGPPGPPGPAGNPGT--DGAPGNPGAPGQV 237
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 425 FSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQ 556
F+G PP P G P PP P P PSG G PP+
Sbjct: 90 FAGGIPPPPPMMGGIPPPPPMFGAPP--PPPPPSGLGVAPQPPR 131
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 879 GXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPG 736
G G+ PP P G +G G G G PG V G G PG
Sbjct: 166 GIPGRMGPPGPAGVRGPPGE--LGMRGPQGDPGKVLNGAPQGQPGRPG 211
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQG 559
P P PP P P G G PPP G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG 794
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 481 PXPVXPPXXPXPXAFXXGXXXXP-PPRGXXXXPPNXGXTP 597
P P P P P G P PPRG PP G P
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQG 559
P P PP P P G G PPP G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG 794
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 481 PXPVXPPXXPXPXAFXXGXXXXP-PPRGXXXXPPNXGXTP 597
P P P P P G P PPRG PP G P
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQG 559
P P PP P P G G PPP G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG 794
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 481 PXPVXPPXXPXPXAFXXGXXXXP-PPRGXXXXPPNXGXTP 597
P P P P P G P PPRG PP G P
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 482 PXPXPPPXXPXPXPSGXGXGXPPPQG 559
P P PP P P G G PPP G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG 794
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 481 PXPVXPPXXPXPXAFXXGXXXXP-PPRGXXXXPPNXGXTP 597
P P P P P G P PPRG PP G P
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 494 PPPXXPXPXPSGXGXGXPPPQGG 562
PPP P P P G G G P GG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 494 PPPXXPXPXPSGXGXGXPPPQGG 562
PPP P P P G G G P GG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGG 85
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 879 GXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPG 736
G G PP P G G G + G GGPG G PG
Sbjct: 237 GTPGPAGPPGPPGPAGAPGQPGQSGSGQPGGPGPQGDAGAPGAPGQPG 284
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 879 GXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPGG 733
G G PP P G G G A G G PG G PGG
Sbjct: 249 GGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGG 297
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 7/58 (12%)
Frame = +2
Query: 443 PPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXP-------PPQGGXSXXPQXRGXP 595
PP P P P PP P P G P PP+G P RG P
Sbjct: 109 PPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYP 166
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 7/58 (12%)
Frame = +2
Query: 443 PPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXP-------PPQGGXSXXPQXRGXP 595
PP P P P PP P P G P PP+G P RG P
Sbjct: 109 PPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYP 166
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPG 736
G + G G PP P G +G G G G PG V G G PG
Sbjct: 180 GTSGQDGVPGLPGPPGPSGPQGAPGV--PGEKGPTGEPGKVINGAPPGPPGPPG 231
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 446 PXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPP 553
P P G + P P PPP P S PPP
Sbjct: 662 PVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 615 WXKXFXRGXPRIWGXXXXPPWGGGXPXPXPEGXGXGXXGGGNGXG 481
W G P WG WGGG G G G G G G
Sbjct: 20 WGPGGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRG 64
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 446 PXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPP 553
P P G + P P PPP P S PPP
Sbjct: 662 PVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +2
Query: 494 PPPXXPX--PXPSGXGXGXPPPQG 559
PPP P P P G G PPPQG
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQG 731
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 26.6 bits (56), Expect(2) = 4.4
Identities = 24/80 (30%), Positives = 25/80 (31%)
Frame = -3
Query: 915 GXXPXXGXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPG 736
G G GG G G G G G GGPGG G G G
Sbjct: 101 GGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGG-----G 155
Query: 735 GXAXLEXGGEFXEXXSGGXG 676
G GG+F GG G
Sbjct: 156 GGG----GGDFGGYGGGGMG 171
Score = 21.0 bits (42), Expect(2) = 4.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 555 WGGGXPXPXPEGXGXGXXGGGNGXG 481
+GGG G G G GGG G
Sbjct: 188 FGGGGMGGYGGGMGGGGYGGGGMGG 212
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -3
Query: 879 GXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPGGXAXLEXGGE 706
G G+ P P G G G G GGPGG G G PG GE
Sbjct: 154 GPPGEVGPAGPSGDNGRKGP-----PGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGE 206
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 594 GXPRIWGXXXXPPWGGGXPXPXPEGXGXGXXGGGNGXG 481
G P G PP GG P P G G GG G G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 594 GXPRIWGXXXXPPWGGGXPXPXPEGXGXGXXGGGNGXG 481
G P G PP GG P P G G GG G G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 897 GXNPXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGV 775
G P G G+ PP P G G G G G PG V
Sbjct: 189 GNTPSRGGVGEAGPPGPPGTSGNPGT--DGAPGNPGAPGQV 227
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +2
Query: 398 PXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPPQGGXSXXP 577
P P PP P P P PPP P PPP G + P
Sbjct: 473 PGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMA--P 530
Query: 578 QXRGXP 595
G P
Sbjct: 531 LSTGAP 536
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 443 PPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPP 553
PP P G PPP P P G PPP
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPP 540
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 443 PPXPXXXGXXFWXPXPXPPPXXPXPXPSGXGXGXPPP 553
PP P P P PPP P+G PPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP 1379
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 779 PPGPPXVPXXAXYRXPXXPFFPXGXGGXXFPXXPPXG 889
PP PP +P P P P GG P PP G
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
Score = 25.8 bits (54), Expect(2) = 6.5
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 497 PPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXPRXKXFXQ 616
PP P P P G PPP G P K Q
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGGLMGPASNDAKTIKKIYQ 615
Score = 21.0 bits (42), Expect(2) = 6.5
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 482 PXPXPPPXXPXPXP 523
P P PPP P P
Sbjct: 531 PRPAPPPVSSIPPP 544
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -3
Query: 888 PXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPG 736
P G PP P G G G A G G PG G PG
Sbjct: 220 PEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPG 270
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -3
Query: 852 SPXGKKGXXGXR*XAXXGTXGGPGG--VXXGXXXGXFXXPGGXAXLEXGGEFXEXXSGG 682
S G++G G R GT G GG G G F G GG F GG
Sbjct: 803 SGFGQRGGYGGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGGGG 861
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -3
Query: 888 PXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPG 736
P G PP P G G G A G G PG G PG
Sbjct: 219 PEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPG 269
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Frame = +2
Query: 395 FPXPGXXXXXFSGLXXPPXPXXXGXXFWXPXPXP-PPXXPXPXPSGXGXGXPPPQGGXSX 571
FP P + PP P P P PP P P PS P PQ +
Sbjct: 134 FPTPPPSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAPRPQAPAAY 193
Query: 572 XP--QXRGXP 595
P Q +G P
Sbjct: 194 PPASQQQGYP 203
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +2
Query: 428 SGLXXPPXPXXXGXXFWXPXPXPPPXXPXP--XPSGXGXGXPPPQGGXSXXPQXRG 589
SG PP P P P P P P P G PP G + P +G
Sbjct: 221 SGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKG 276
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 494 PPPXXPXPXPSGXGXGXPPPQGGXSXXP 577
PPP P P P PPPQ S P
Sbjct: 92 PPPSDPPPPPPPVAPHQPPPQLATSAQP 119
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/71 (30%), Positives = 26/71 (36%)
Frame = -3
Query: 888 PXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPGGXAXLEXGG 709
P GG G+ PP P G+ G R G G G G PG E GG
Sbjct: 207 PPGGV-GEPGPPGPAGQPG----RVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGG 261
Query: 708 EFXEXXSGGXG 676
+ +GG G
Sbjct: 262 QGPPGDAGGPG 272
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/71 (30%), Positives = 26/71 (36%)
Frame = -3
Query: 888 PXGGXXGKXXPPSPXGKKGXXGXR*XAXXGTXGGPGGVXXGXXXGXFXXPGGXAXLEXGG 709
P GG G+ PP P G+ G R G G G G PG E GG
Sbjct: 207 PPGGV-GEPGPPGPAGQPG----RVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGG 261
Query: 708 EFXEXXSGGXG 676
+ +GG G
Sbjct: 262 QGPPGDAGGPG 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +2
Query: 428 SGLXXPPXPXXXGXXFWXPXPXPPPXXPXP--XPSGXGXGXPPPQGGXSXXPQXRG 589
SG PP P P P P P P P G PP G + P +G
Sbjct: 221 SGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKG 276
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 494 PPPXXPXPXPSGXGXGXPPPQGGXSXXPQXRGXP 595
PP P P G PPPQ + PQ G P
Sbjct: 334 PPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGP 367
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = +2
Query: 404 PGXXXXXFSGLXXPPXPXXXGXXFWXPXPXPP--PXXPXPXPSGXGX-GXPPPQGGXSXX 574
PG S P P G + P P P P P G G G PPP G +
Sbjct: 387 PGAFAPPPSAFGAPQGPGGPGG-YGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYG 445
Query: 575 PQXRGXP 595
P G P
Sbjct: 446 PPPTGFP 452
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,281,685
Number of Sequences: 27780
Number of extensions: 237677
Number of successful extensions: 2722
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -