Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_O14
         (1146 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ421853-1|ABD77575.1|  500|Homo sapiens synaptojanin 1 protein.       33   1.5  
BC003605-1|AAH03605.1|  368|Homo sapiens single stranded DNA bin...    32   4.5  
AL161644-7|CAI23563.1|  368|Homo sapiens single stranded DNA bin...    32   4.5  
AL035415-2|CAI22488.1|  368|Homo sapiens single stranded DNA bin...    32   4.5  
AF500116-1|AAM22101.1|  368|Homo sapiens single-stranded DNA-bin...    32   4.5  
AF321609-1|AAT09768.1|  834|Homo sapiens titin protein.                31   6.0  
U47742-1|AAC50662.1| 2004|Homo sapiens monocytic leukaemia zinc ...    31   7.9  

>DQ421853-1|ABD77575.1|  500|Homo sapiens synaptojanin 1 protein.
          Length = 500

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
 Frame = +3

Query: 486 PDAXLPQSYXGSPXNPX--PRXLEXGPPKRXPAPXXXPXPXDTRXQXSP--XXVTPGPXX 653
           P   LPQ     P  P   P      PP R PAP   P P   R Q SP      PGP  
Sbjct: 70  PATPLPQKDPAQPLEPKRPPPPRPVAPPTR-PAPPQRPPPPSGRSQPSPQAGLAGPGPAG 128

Query: 654 LXERXXPXPP 683
                   PP
Sbjct: 129 YSTARPTIPP 138


>BC003605-1|AAH03605.1|  368|Homo sapiens single stranded DNA
           binding protein 3 protein.
          Length = 368

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +3

Query: 516 GSPXNPXPRXLEXGPPKRXPAPXXXPXPXDTRXQXSPXXVTPG 644
           G P  P P     GPP   P+P   P P +      P    PG
Sbjct: 110 GMPGGPIPPGFFQGPPGSQPSPHAQPPPHNPSSMMGPHSQPPG 152


>AL161644-7|CAI23563.1|  368|Homo sapiens single stranded DNA
           binding protein 3 protein.
          Length = 368

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +3

Query: 516 GSPXNPXPRXLEXGPPKRXPAPXXXPXPXDTRXQXSPXXVTPG 644
           G P  P P     GPP   P+P   P P +      P    PG
Sbjct: 110 GMPGGPIPPGFFQGPPGSQPSPHAQPPPHNPSSMMGPHSQPPG 152


>AL035415-2|CAI22488.1|  368|Homo sapiens single stranded DNA
           binding protein 3 protein.
          Length = 368

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +3

Query: 516 GSPXNPXPRXLEXGPPKRXPAPXXXPXPXDTRXQXSPXXVTPG 644
           G P  P P     GPP   P+P   P P +      P    PG
Sbjct: 110 GMPGGPIPPGFFQGPPGSQPSPHAQPPPHNPSSMMGPHSQPPG 152


>AF500116-1|AAM22101.1|  368|Homo sapiens single-stranded
           DNA-binding protein protein.
          Length = 368

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +3

Query: 516 GSPXNPXPRXLEXGPPKRXPAPXXXPXPXDTRXQXSPXXVTPG 644
           G P  P P     GPP   P+P   P P +      P    PG
Sbjct: 110 GMPGGPIPPGFFQGPPGSQPSPHAQPPPHNPSSMMGPHSQPPG 152


>AF321609-1|AAT09768.1|  834|Homo sapiens titin protein.
          Length = 834

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 15/54 (27%), Positives = 21/54 (38%)
 Frame = +3

Query: 486 PDAXLPQSYXGSPXNPXPRXLEXGPPKRXPAPXXXPXPXDTRXQXSPXXVTPGP 647
           P+  LP++    P +P P   E  PPK        P P   + +  P  V   P
Sbjct: 489 PEKKLPEAIPPKPESPPPEVPEVLPPKEVVPEKKVPVPPAKKPEAPPPKVPEAP 542


>U47742-1|AAC50662.1| 2004|Homo sapiens monocytic leukaemia zinc
            finger protein protein.
          Length = 2004

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 15/58 (25%), Positives = 22/58 (37%)
 Frame = +3

Query: 501  PQSYXGSPXNPXPRXLEXGPPKRXPAPXXXPXPXDTRXQXSPXXVTPGPXXLXERXXP 674
            P +    P  P P+  +  PP+  PAP   P     + Q  P    P P    ++  P
Sbjct: 1644 PSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPP 1701


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,741,397
Number of Sequences: 237096
Number of extensions: 915210
Number of successful extensions: 1783
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 16032164540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)