Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_O13
(908 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0035 - 27221338-27221433,27221510-27221599,27222056-272221... 34 0.18
07_03_1751 - 29215074-29216270 32 0.72
01_03_0005 + 11568545-11569119,11569179-11569191 32 0.72
07_03_0177 - 14770777-14772045 31 0.96
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 31 1.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 3.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 5.1
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 6.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.7
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 29 6.7
07_03_0559 + 19475893-19476783 29 6.7
06_02_0125 + 12122812-12122911,12123647-12123993 29 6.7
11_01_0385 + 2915532-2916482 28 8.9
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 28 8.9
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 28 8.9
>05_07_0035 -
27221338-27221433,27221510-27221599,27222056-27222115,
27222231-27222523,27222601-27222757,27222917-27223261,
27223890-27224020,27224119-27224596,27224817-27225563
Length = 798
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +3
Query: 744 APPKKNPFXXGXPGLXKXWXPKXPLXPPPGPXXP 845
APP NP G P L K W P P PPP P P
Sbjct: 54 APPAPNP-TRGAPWLQK-WGPTDPAAPPPPPPAP 85
>07_03_1751 - 29215074-29216270
Length = 398
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = -2
Query: 880 GGGXXXKKNLXGGXXG-PGGGXRGXFGXHXXCXPGXPXXNGFFLGGAXXXXXXFXGGK 710
GGG GG G GGG G FG G GF GG F GGK
Sbjct: 304 GGGGGGGAGAGGGFGGGKGGGFGGGFGGGKGGGVGGGAGGGFGGGGGAGAGGGFGGGK 361
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.9 bits (69), Expect = 0.72
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 813 PLXPPPGPXXPPXKFFFXXXPPPXFS 890
P PPP P P F++ PPP +S
Sbjct: 138 PTPPPPNPFLPYFPFYYYSPPPPFYS 163
>07_03_0177 - 14770777-14772045
Length = 422
Score = 31.5 bits (68), Expect = 0.96
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 877 GGXXXKKNLXGGXXGPGGGXRGXFGXHXXCXPGXPXXNGFFLGGAXXXXXXFXGG 713
GG K GG G GGG G FG G G LGG GG
Sbjct: 166 GGGYGKGGGLGGGIGKGGGLGGGFGKSGGLGGGGGLGGGGGLGGGIGKGGGLGGG 220
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -2
Query: 880 GGGXXXKKNLXGGXXGPGGGXRGXFGXHXXCXPGXPXXNGFFLGGAXXXXXXFXGG 713
GGG GG G GGG G FG G G LGG GG
Sbjct: 197 GGGGLGGGGGLGGGIGKGGGLGGGFGKGGGLGGGGGLGGGGGLGGGIGKGGGLGGG 252
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 847 GGXXGPGGGXRGXFGXHXXCXPGXPXXNGFFLGGAXXXXXXFXGG 713
GG G GGG G G G GF GG F GG
Sbjct: 88 GGGGGLGGGGGGGLGGGGGFGKGGGVGGGFGKGGGFGKGGGFGGG 132
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -2
Query: 880 GGGXXXKKNLXGGXXGPGGGXRGXFGXHXXCXPGXPXXNGFFLGGAXXXXXXFXGG 713
GGG L GG G GGG G G G GF +GG GG
Sbjct: 358 GGGLGGGGGLGGGGGGGGGGFGGGGGSGIGGGFGKGGGFGFGVGGGGFGGGGGGGG 413
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 747 PPKKNPFXXGXPGLXKXWXPKXPLXPPPGPXXP 845
PP+K P P + W P P PPP P P
Sbjct: 114 PPRKKPQFQPPPQPPRAWDPSPP-PPPPAPAAP 145
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +3
Query: 744 APPKKNPFXXGXPGLXKXWXPKXPLXPPPGPXXPPXKFFFXXXPPP 881
APP P G + P P PPP P P + PPP
Sbjct: 543 APPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPP 588
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 804 PKXPLXPPPGPXXPPXKFFFXXXPPP 881
P P PPP P PP K PPP
Sbjct: 350 PPPPPPPPPPPPPPPPKLNTAPKPPP 375
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 714 PPXXXXXXXXAPPKKNPFXXGXPGLXKXWXPKXPLXPPPGPXXPPXKFFFXXXPPP 881
PP PP P P P P PPP P PP PPP
Sbjct: 1158 PPLPPSPPPATPPPPPPLSPSLPPPPPP--PPLPSGPPPQPAPPPLPIQPPPIPPP 1211
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 804 PKXPLXPPPGPXXPPXKFFFXXXPPP 881
P PL PPP P PP PPP
Sbjct: 426 PPPPLPPPPPPPPPPPPPLPPNMPPP 451
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 6.7
Identities = 32/133 (24%), Positives = 35/133 (26%), Gaps = 8/133 (6%)
Frame = +3
Query: 507 PPXXXXXXXPPXKXPXGGGGPFXXPXXFXPXXXX--PXFKKXXPPPFFXXGXXXKKXFXF 680
PP PP P G P P P F PPP + F F
Sbjct: 13 PPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNF 72
Query: 681 *KKKKXXXXFFPPXXXXXXXXAPPKKNPFXXGX------PGLXKXWXPKXPLXPPPGPXX 842
PP PP P+ P P P PPP P
Sbjct: 73 GPGPPQQQQ--PPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQ 130
Query: 843 PPXKFFFXXXPPP 881
PP + PPP
Sbjct: 131 PPPREAQLAPPPP 143
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 813 PLXPPPGPXXPPXKFFFXXXPP-PXFSG 893
PL PPP P PP PP P FSG
Sbjct: 1155 PLPPPPPPPLPPPPPVAPFHPPGPHFSG 1182
>07_03_0559 + 19475893-19476783
Length = 296
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 847 GGXXGPGGGXRGXFGXHXXCXPGXPXXNGFFLGGAXXXXXXFXGG 713
GG G GGG RG G G G LGG F GG
Sbjct: 64 GGGFGGGGGFRGGGGGGLGGGGGFGGGGGGGLGGGGCEGGGFGGG 108
>06_02_0125 + 12122812-12122911,12123647-12123993
Length = 148
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 844 GXXGPGGGXRGXFGXHXXCXPGXPXXNGFFLGG 746
G G GGG G +G C G P +G + GG
Sbjct: 86 GHPGYGGGYGGGYGQGYGCGYGHPGHSGGYGGG 118
>11_01_0385 + 2915532-2916482
Length = 316
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 747 PPKKNPFXXGXPGLXKXWXPKXPLXPPPGPXXP 845
PP P P W P P PPP P P
Sbjct: 183 PPFNQPPTPEWPHPGNKWPPLPPFHPPPTPAWP 215
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 880 GGGXXXKKNLXGGXXGPGGGXRGXFG 803
GGG + GG G GGG RG G
Sbjct: 644 GGGRFGNRRFSGGGGGRGGGGRGFGG 669
>03_02_0786 -
11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 804 PKXPLXPPPGPXXPPXKFFFXXXPPP 881
P P+ PPP P PP + PP
Sbjct: 30 PPPPMGPPPPPPMPPVPVMYLRGVPP 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,004,289
Number of Sequences: 37544
Number of extensions: 231609
Number of successful extensions: 1417
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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