Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_O13
         (908 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    27   9.6  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    27   9.6  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    27   9.6  

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 27.5 bits (58), Expect(2) = 9.6
 Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
 Frame = +3

Query: 507 PPXXXXXXXPPXKXPXGGGGPFXXPXXFXP-XXXXPXFKKXXPPP 638
           PP       PP   P G G P   P    P     P F    PPP
Sbjct: 324 PPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPP 368



 Score = 21.4 bits (43), Expect(2) = 9.6
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = +3

Query: 747 PPKKNPFXXGXPGLXKXWXPKXPLXPPPGPXXPP 848
           PP  +      P L +      P  PPP P  PP
Sbjct: 370 PPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 27.5 bits (58), Expect(2) = 9.6
 Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
 Frame = +3

Query: 507 PPXXXXXXXPPXKXPXGGGGPFXXPXXFXP-XXXXPXFKKXXPPP 638
           PP       PP   P G G P   P    P     P F    PPP
Sbjct: 324 PPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPP 368



 Score = 21.4 bits (43), Expect(2) = 9.6
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = +3

Query: 747 PPKKNPFXXGXPGLXKXWXPKXPLXPPPGPXXPP 848
           PP  +      P L +      P  PPP P  PP
Sbjct: 370 PPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 27.5 bits (58), Expect(2) = 9.6
 Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
 Frame = +3

Query: 507 PPXXXXXXXPPXKXPXGGGGPFXXPXXFXP-XXXXPXFKKXXPPP 638
           PP       PP   P G G P   P    P     P F    PPP
Sbjct: 324 PPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPP 368



 Score = 21.4 bits (43), Expect(2) = 9.6
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = +3

Query: 747 PPKKNPFXXGXPGLXKXWXPKXPLXPPPGPXXPP 848
           PP  +      P L +      P  PPP P  PP
Sbjct: 370 PPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,367,821
Number of Sequences: 237096
Number of extensions: 1355963
Number of successful extensions: 4344
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3785
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)