Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_O08
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF005372-1|AAB81030.1| 225|Caenorhabditis elegans histone H1.5 ... 62 7e-10
AF003145-1|AAB57720.1| 225|Caenorhabditis elegans Histone h1 li... 62 7e-10
AF068708-3|AAC17754.1| 253|Caenorhabditis elegans Histone h1 li... 59 4e-09
AF026521-1|AAB82588.1| 253|Caenorhabditis elegans histone H1.4 ... 59 4e-09
AF005371-1|AAB81029.1| 253|Caenorhabditis elegans histone H1.4 ... 59 4e-09
AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 l... 59 5e-09
U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like... 57 1e-08
AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3 ... 57 1e-08
AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2 ... 55 6e-08
AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2 ... 55 6e-08
AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 li... 55 6e-08
Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical pr... 55 8e-08
AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1 ... 55 8e-08
X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1 prot... 52 7e-07
Z78239-1|CAB01632.1| 232|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF002679-1|AAB60893.1| 232|Caenorhabditis elegans histone H1-li... 50 2e-06
Z93395-5|CAE18034.1| 519|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z83112-6|CAE17883.1| 519|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF100656-11|AAF99960.1| 115|Caenorhabditis elegans Hypothetical... 33 0.27
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 3.4
AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical... 29 4.5
Z74475-5|CAA98959.2| 279|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical pr... 29 5.9
U40936-1|AAL65777.2| 770|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 5.9
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 5.9
AC024765-8|AAF60530.1| 165|Caenorhabditis elegans Hypothetical ... 29 5.9
Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 28 7.8
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF005372-1|AAB81030.1| 225|Caenorhabditis elegans histone H1.5
protein.
Length = 225
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+MI EA+ LK RKG S AI K+IT KY + +K N ++ +K GV+ +VQT G
Sbjct: 43 NMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSALKKGVVSKVLVQTNG 102
Query: 353 VGAAGSFKLAPIKEK 397
+GA G F+LA + EK
Sbjct: 103 IGANGRFRLA-VAEK 116
>AF003145-1|AAB57720.1| 225|Caenorhabditis elegans Histone h1 like
protein 5 protein.
Length = 225
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+MI EA+ LK RKG S AI K+IT KY + +K N ++ +K GV+ +VQT G
Sbjct: 43 NMITEAVSNLKDRKGSSRVAIFKFITAKYTLGDQVNKTNAHLRSALKKGVVSKVLVQTNG 102
Query: 353 VGAAGSFKLAPIKEK 397
+GA G F+LA + EK
Sbjct: 103 IGANGRFRLA-VAEK 116
>AF068708-3|AAC17754.1| 253|Caenorhabditis elegans Histone h1 like
protein 4 protein.
Length = 253
Score = 59.3 bits (137), Expect = 4e-09
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+M+ EA+ +K RKG S AI KYIT KY + A+KIN ++K + G+ A VQ G
Sbjct: 57 NMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQANKINAHLRKALNKGLESNAFVQASG 116
Query: 353 VGAAGSFKLA 382
GA G F+LA
Sbjct: 117 NGANGRFRLA 126
>AF026521-1|AAB82588.1| 253|Caenorhabditis elegans histone H1.4
protein.
Length = 253
Score = 59.3 bits (137), Expect = 4e-09
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+M+ EA+ +K RKG S AI KYIT KY + A+KIN ++K + G+ A VQ G
Sbjct: 57 NMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQANKINAHLRKALNKGLESNAFVQASG 116
Query: 353 VGAAGSFKLA 382
GA G F+LA
Sbjct: 117 NGANGRFRLA 126
>AF005371-1|AAB81029.1| 253|Caenorhabditis elegans histone H1.4
protein.
Length = 253
Score = 59.3 bits (137), Expect = 4e-09
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+M+ EA+ +K RKG S AI KYIT KY + A+KIN ++K + G+ A VQ G
Sbjct: 57 NMVTEAISSIKDRKGPSRAAILKYITTKYTLGDQANKINAHLRKALNKGLESNAFVQASG 116
Query: 353 VGAAGSFKLA 382
GA G F+LA
Sbjct: 117 NGANGRFRLA 126
>AF016425-12|AAB65336.1| 190|Caenorhabditis elegans Histone h1 like
protein 6 protein.
Length = 190
Score = 58.8 bits (136), Expect = 5e-09
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+M+ A+ LK RKG S AI KYIT Y++ KIN ++ +K GV A+VQT G
Sbjct: 40 NMVTAAISSLKERKGSSKIAILKYITANYKLGDQVKKINSNLRSALKKGVASKALVQTVG 99
Query: 353 VGAAGSFKLA 382
GA G F++A
Sbjct: 100 TGATGRFRVA 109
>U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like
protein 3 protein.
Length = 208
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRVDAD--KINYLIKKQIKNGVIDGAIVQTKG 352
+M+ A+ LK RKG S AI KYIT+ Y V KIN ++ + GV+ A+VQ+ G
Sbjct: 43 NMVTAAINGLKERKGSSKIAILKYITKNYNVGDQIIKINARLRDTLNKGVVSKALVQSVG 102
Query: 353 VGAAGSFKLAPIKEKKKQTPL 415
GA+G F++ K + P+
Sbjct: 103 TGASGRFRVTEKKAAAAKKPV 123
>AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3
protein.
Length = 208
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRVDAD--KINYLIKKQIKNGVIDGAIVQTKG 352
+M+ A+ LK RKG S AI KYIT+ Y V KIN ++ + GV+ A+VQ+ G
Sbjct: 43 NMVTAAINGLKERKGSSKIAILKYITKNYNVGDQIIKINARLRDTLNKGVVSKALVQSVG 102
Query: 353 VGAAGSFKLAPIKEKKKQTPL 415
GA+G F++ K + P+
Sbjct: 103 TGASGRFRVTEKKAAAAKKPV 123
>AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+M+ A+ LK RKG S AI KYIT Y+V KIN ++ + GV A+VQ+ G
Sbjct: 43 NMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVG 102
Query: 353 VGAAGSFKLA 382
GA+G F++A
Sbjct: 103 NGASGRFRVA 112
>AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+M+ A+ LK RKG S AI KYIT Y+V KIN ++ + GV A+VQ+ G
Sbjct: 43 NMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVG 102
Query: 353 VGAAGSFKLA 382
GA+G F++A
Sbjct: 103 NGASGRFRVA 112
>AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 like
protein 2, isoforma protein.
Length = 241
Score = 55.2 bits (127), Expect = 6e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+M+ A+ LK RKG S AI KYIT Y+V KIN ++ + GV A+VQ+ G
Sbjct: 93 NMVTAAISSLKERKGSSKIAILKYITANYKVGDQLTKINSRLRAALNKGVASKALVQSVG 152
Query: 353 VGAAGSFKLA 382
GA+G F++A
Sbjct: 153 NGASGRFRVA 162
>Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical
protein M163.3 protein.
Length = 208
Score = 54.8 bits (126), Expect = 8e-08
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+MI EA+ +LK RKG S AI K+I++ Y++ + +IN +++ +K GV A+VQ G
Sbjct: 43 NMIKEAIKQLKDRKGASKQAILKFISQNYKLGDNVIQINAHLRQALKRGVTSKALVQAAG 102
Query: 353 VGAAGSFKLAPIKEKKKQTP 412
GA G F++ P K + P
Sbjct: 103 SGANGRFRV-PEKAAAAKKP 121
>AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1
protein.
Length = 208
Score = 54.8 bits (126), Expect = 8e-08
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKG 352
+MI EA+ +LK RKG S AI K+I++ Y++ + +IN +++ +K GV A+VQ G
Sbjct: 43 NMIKEAIKQLKDRKGASKQAILKFISQNYKLGDNVIQINAHLRQALKRGVTSKALVQAAG 102
Query: 353 VGAAGSFKLAPIKEKKKQTP 412
GA G F++ P K + P
Sbjct: 103 SGANGRFRV-PEKAAAAKKP 121
>X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1
protein.
Length = 208
Score = 51.6 bits (118), Expect = 7e-07
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +2
Query: 185 IHEALGELKTRKGVSLYAIKKYITEKYRV--DADKINYLIKKQIKNGVIDGAIVQTKGVG 358
I EA+ +LK RKG S AI K+I++ Y++ + +IN ++ +K GV A+VQ +G G
Sbjct: 45 IKEAIKQLKDRKGASKQAILKFISQNYKLGDNVIQINAHHRQALKRGVTSKALVQARGSG 104
Query: 359 AAGSFKLAPIKEKKKQTP 412
A G F++ P K + P
Sbjct: 105 ANGRFRV-PEKAAAAKKP 121
>Z78239-1|CAB01632.1| 232|Caenorhabditis elegans Hypothetical
protein C30G7.1 protein.
Length = 232
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRVDAD--KINYLIKKQIKNGVIDGAIVQTKG 352
DMI A+ + G S AI KYI + Y V + K+N ++ +K V G I QT+G
Sbjct: 42 DMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLPKVNNHLRSVLKKAVDSGDIEQTRG 101
Query: 353 VGAAGSFKLAPIKEKKKQ 406
GA GSF++ EK Q
Sbjct: 102 HGATGSFRMGKECEKNLQ 119
>AF002679-1|AAB60893.1| 232|Caenorhabditis elegans histone H1-like
protein protein.
Length = 232
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 179 DMIHEALGELKTRKGVSLYAIKKYITEKYRVDAD--KINYLIKKQIKNGVIDGAIVQTKG 352
DMI A+ + G S AI KYI + Y V + K+N ++ +K V G I QT+G
Sbjct: 42 DMIKGAIQAIDNGTGSSKAAILKYIAQNYHVGENLPKVNNHLRSVLKKAVDSGDIEQTRG 101
Query: 353 VGAAGSFKLAPIKEKKKQ 406
GA GSF++ EK Q
Sbjct: 102 HGATGSFRMGKECEKNLQ 119
>Z93395-5|CAE18034.1| 519|Caenorhabditis elegans Hypothetical
protein ZC101.3 protein.
Length = 519
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -2
Query: 240 MAYNETPFLVFSSPRASWIMSFVLFFSIKTSAVWMVCFFFFAVALGKGVSDSASDSSRLH 61
+AYN TPFLV S ++ ++ KT AVW+ V++ + ++S SD L
Sbjct: 128 VAYNFTPFLVAVSMAQGTVVFLTAMYAKKTWAVWLSALPVLYVSMHE--TNSLSDDPFLI 185
Query: 60 FGFV 49
F F+
Sbjct: 186 FTFL 189
>Z83112-6|CAE17883.1| 519|Caenorhabditis elegans Hypothetical
protein ZC101.3 protein.
Length = 519
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -2
Query: 240 MAYNETPFLVFSSPRASWIMSFVLFFSIKTSAVWMVCFFFFAVALGKGVSDSASDSSRLH 61
+AYN TPFLV S ++ ++ KT AVW+ V++ + ++S SD L
Sbjct: 128 VAYNFTPFLVAVSMAQGTVVFLTAMYAKKTWAVWLSALPVLYVSMHE--TNSLSDDPFLI 185
Query: 60 FGFV 49
F F+
Sbjct: 186 FTFL 189
>Z81539-4|CAB04392.2| 208|Caenorhabditis elegans Hypothetical
protein F46A8.6 protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 572 ENQLKITKANTKKPSKDKMAAGEVADAPKRKKQNRPKTRKLPPKRSP 712
+NQ K K +K+P+K K + + + +KK+ K++K K+ P
Sbjct: 65 DNQKKSKKKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKKSAEKKKP 111
>AF100656-11|AAF99960.1| 115|Caenorhabditis elegans Hypothetical
protein F49F1.12 protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 572 ENQLKITKANTKKPSKDKMAAGEVADAPKRKKQNRPKTRKLPPKRSP 712
+NQ K K +K+P+K K + + + +KK+ K++K K+ P
Sbjct: 2 DNQKKSKKKKSKEPAKKKKKSADSSQKVSKKKKKSSKSKKSAEKKKP 48
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 636 ERSRTRRKEKNKIVQR-RANSRQKEVHADEKEKHRE 740
E+ R+ RKEK + ++R + SR+KE E+EK RE
Sbjct: 209 EKERSERKEKERELEREKEKSREKE-REKEREKERE 243
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 563 KTDENQLKITKANTKKPSKDKMAAGEVADAPKRKKQNRPKTRKL 694
K+ + + K + KKPS D + +G + APKR K + +L
Sbjct: 114 KSKDEKKKKKNSKGKKPSTDPLFSGPLTQAPKRSKGETQELNQL 157
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 633 PERSRTRRKEKNKIVQRRANSRQKEVHADEKEKHR 737
P RS +RR+ +++ QRR+ SR + ++ ++ + R
Sbjct: 429 PRRSNSRRRSRSRDRQRRSRSRDRRRYSPDRRERR 463
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Frame = +1
Query: 511 QTEAGCSERENRETEKQEDG*ESIEN-----HESEYEKTVERQNXXXXXXXXAEKK-KTK 672
+ E +E+E +E EK+EDG E E+ E+E ++ E+ +KK KTK
Sbjct: 70 EAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEKTK 129
Query: 673 S-SKDAQTPAKKKSMLMRRK 729
+ + + KKK +K
Sbjct: 130 TEDNEGKNEEKKKEKKEEKK 149
>AL031630-14|CAA20993.1| 185|Caenorhabditis elegans Hypothetical
protein Y38H6C.15 protein.
Length = 185
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 557 SKKTDENQLKITKANTKKPSKDKMAAGEVADAPKRKKQNRPKT 685
SKK+D+ + K T ++ KP K + E + PK K++ + KT
Sbjct: 92 SKKSDKTKKKTTVSSEDKPEKPEKLTEE--EKPKEKEKAKEKT 132
>Z74475-5|CAA98959.2| 279|Caenorhabditis elegans Hypothetical
protein R04F11.1 protein.
Length = 279
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 740 FPMLFLLISMDFFLAGVCASLDDFVFFFSARPRPL 636
FP LL + F+ G C+ L D ++ F+ +P+
Sbjct: 137 FPPNALLYVVGVFMTGACSLLADIIYIFAFNQKPI 171
>Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical
protein F40F9.10 protein.
Length = 502
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 560 KKTDENQLKITKANTKKPSKDKMAAGEVADAPKRKKQNRPKT 685
+KT++ + K+ KKP+ K + A APK+KK R KT
Sbjct: 306 QKTEKVEKKVVAEKKKKPADGKEKTDKDA-APKKKKVLRQKT 346
>U40936-1|AAL65777.2| 770|Caenorhabditis elegans Hypothetical
protein C13E3.1 protein.
Length = 770
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 639 RSRTRRKEKNKIVQRRANSRQKEVHADEKEK 731
RS +RK+ K+ +RR +R E+ A+EK K
Sbjct: 80 RSLLKRKQAPKMHRRRLQARNPEMEAEEKAK 110
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 529 SERENRETEKQEDG*ESIENHESEYEKTVERQNXXXXXXXXAEKKKTKSSKDAQTPAKKK 708
S++++++T+KQ ES E ESE E+ V++ + ++ S + + P+KK
Sbjct: 140 SKKKSKKTKKQTSS-ESSE--ESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKS 196
Query: 709 SMLMRRKS 732
+++K+
Sbjct: 197 KKGLKKKA 204
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 529 SERENRETEKQEDG*ESIENHESEYEKTVERQNXXXXXXXXAEKKKTKSSKDAQTPAKKK 708
S++++++T+KQ ES E ESE E+ V++ + ++ S + + P+KK
Sbjct: 140 SKKKSKKTKKQTSS-ESSE--ESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKS 196
Query: 709 SMLMRRKS 732
+++K+
Sbjct: 197 KKGLKKKA 204
>AC024765-8|AAF60530.1| 165|Caenorhabditis elegans Hypothetical
protein Y39A3CR.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 633 PERSRTRRKEKNKIVQRRANSRQKEVHADEKEKHREYL 746
PE+ R+K K ++RA SR+ + +K K R+ L
Sbjct: 95 PEKRHKRKKRVTKSKEQRAKSRESKEEERDKAKRRKKL 132
>Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical
protein F23A7.5 protein.
Length = 632
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 109 SDSKEEKTNHPNRRSLD-REEKNKRHDPRGSRRTED*KRRFIIRHQE 246
S S E++ + RS D R R RGSRR D + R RH++
Sbjct: 575 SGSIEKRRSQSRSRSRDSRRHSRSRSGSRGSRRRSDRRARHERRHRD 621
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical
protein R09E10.7 protein.
Length = 1717
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +2
Query: 287 NYLIKKQIKNGVIDGAIVQTKGVGAAGSFKLAP------IKEKKKQTPLMQ 421
NYL +K I+ GV AI + S+K+ P +K+KKK+ L++
Sbjct: 579 NYLNEKDIRFGVPTDAIFYVDAPNLSNSYKMVPPHREKVLKKKKKKKKLLK 629
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +1
Query: 106 QSDSKEEKTNHPNRRSLDREEKNKRHDPRGSRRTED*KRRFIIRHQE 246
+ + KEE+ +++ D ++K + D + S++TE+ + + + QE
Sbjct: 71 EEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQE 117
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 636 ERSRTRRKEKNKIVQRRANSRQKEVHADEKEKHREYLKPPK 758
E+ + + KEK K ++ N KE EKE+ +E KPPK
Sbjct: 71 EKEKEKEKEKEKTHEK--NEADKEEKEAEKEEEKEE-KPPK 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,834,134
Number of Sequences: 27780
Number of extensions: 234401
Number of successful extensions: 1497
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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