Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_O05
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0023 - 20299435-20299528,20299666-20299757,20299873-202999...    52   9e-07
05_07_0344 + 29411767-29411961,29412692-29412741,29413295-294134...    48   1e-05
08_02_0471 - 17563245-17563488,17563564-17563655,17563941-175640...    43   4e-04
09_02_0435 - 9384225-9384412,9385084-9385133,9385209-9385274,938...    39   0.005
08_01_0208 + 1662101-1662223,1663130-1663243,1663327-1663468,166...    36   0.045
04_04_1167 + 31432731-31433769,31433893-31433941,31434363-314344...    36   0.060
02_02_0183 + 7576901-7576908,7577666-7578176                           29   6.9  

>09_06_0023 -
           20299435-20299528,20299666-20299757,20299873-20299955,
           20300066-20300147,20300235-20300462,20300646-20300747,
           20300834-20300969,20301105-20301514
          Length = 408

 Score = 51.6 bits (118), Expect = 9e-07
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +2

Query: 107 MWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           ++A T  AK+ELGWS +  IE+MC D W W   NP GY
Sbjct: 364 VYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGY 401


>05_07_0344 +
           29411767-29411961,29412692-29412741,29413295-29413430,
           29413931-29414032,29414153-29414380,29414460-29414544,
           29414648-29414730,29414854-29414945,29415048-29415141
          Length = 354

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +2

Query: 107 MWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           ++A T+ A++EL W  +  +EEMC D W W + NP GY
Sbjct: 310 VYAQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGY 347


>08_02_0471 -
           17563245-17563488,17563564-17563655,17563941-17564023,
           17564418-17564499,17565234-17565461,17565553-17565654,
           17565818-17565953,17566080-17566129,17566465-17566572,
           17568702-17568911
          Length = 444

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 128 AKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A++EL W  +  I+EMC D W W + NP GY
Sbjct: 357 AEKELNWKAKFGIDEMCRDQWNWASKNPYGY 387


>09_02_0435 -
           9384225-9384412,9385084-9385133,9385209-9385274,
           9385360-9385451,9385893-9385975,9386181-9386259,
           9386888-9387115,9387196-9387297,9387719-9387854,
           9387984-9388033,9389391-9389618
          Length = 433

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 107 MWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDG 217
           +++  + A+ E  W  +  IEEMC D W W + NP G
Sbjct: 319 LFSSAAKAEREFKWKAKYGIEEMCRDQWNWASKNPFG 355


>08_01_0208 +
           1662101-1662223,1663130-1663243,1663327-1663468,
           1663496-1663610,1663936-1664077,1664216-1664313,
           1664396-1664525,1664740-1664884,1665163-1665389
          Length = 411

 Score = 35.9 bits (79), Expect = 0.045
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLT-IEEMCTDFWRWQTMNPDGY 220
           A +++D +    EL W+ Q T ++E  +  WRWQ  +P GY
Sbjct: 368 AEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGY 408


>04_04_1167 +
           31432731-31433769,31433893-31433941,31434363-31434427,
           31435237-31435346,31436327-31436388,31438067-31438113,
           31438148-31438272,31438651-31438764,31438852-31438979,
           31439059-31439154,31439565-31439706,31439799-31439893,
           31439966-31440095,31440179-31440323,31440430-31440656
          Length = 857

 Score = 35.5 bits (78), Expect = 0.060
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQ-LTIEEMCTDFWRWQTMNPDGY 220
           A +++D S   +EL W+ + + + E  +  W+WQ  +P+GY
Sbjct: 814 AEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGY 854


>02_02_0183 + 7576901-7576908,7577666-7578176
          Length = 172

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 69  NVRRSKTWRHQRRCGRTPHWLKKNSDG 149
           +V R + WR +RRCGR   W +   DG
Sbjct: 127 SVARWRRWRRRRRCGRA-GWKRGQRDG 152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,376,804
Number of Sequences: 37544
Number of extensions: 322290
Number of successful extensions: 684
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)