Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_O05
         (925 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41668-1|AAB86498.1|  348|Homo sapiens UDP-galactose-4-epimerase...    56   1e-07
DQ233668-1|ABB04110.1|  348|Homo sapiens UDP galactose 4'-epimer...    56   1e-07
DQ233667-1|ABB04109.1|  348|Homo sapiens UDP galactose 4'-epimer...    56   1e-07
BC050685-1|AAH50685.2|  348|Homo sapiens UDP-galactose-4-epimera...    56   1e-07
BC001273-1|AAH01273.1|  348|Homo sapiens UDP-galactose-4-epimera...    56   1e-07
AL031295-16|CAB40159.1|  348|Homo sapiens UDP-galactose-4-epimer...    56   1e-07
AL031295-13|CAI23149.1|  108|Homo sapiens UDP-galactose-4-epimer...    56   1e-07
AF022382-1|AAC39645.1|  348|Homo sapiens UDP-galactose 4' epimer...    56   1e-07

>L41668-1|AAB86498.1|  348|Homo sapiens UDP-galactose-4-epimerase
           protein.
          Length = 348

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A  +A+ SLA+EELGW+  L ++ MC D WRWQ  NP G+
Sbjct: 305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344


>DQ233668-1|ABB04110.1|  348|Homo sapiens UDP galactose 4'-epimerase
           protein.
          Length = 348

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A  +A+ SLA+EELGW+  L ++ MC D WRWQ  NP G+
Sbjct: 305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344


>DQ233667-1|ABB04109.1|  348|Homo sapiens UDP galactose 4'-epimerase
           protein.
          Length = 348

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A  +A+ SLA+EELGW+  L ++ MC D WRWQ  NP G+
Sbjct: 305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344


>BC050685-1|AAH50685.2|  348|Homo sapiens UDP-galactose-4-epimerase
           protein.
          Length = 348

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A  +A+ SLA+EELGW+  L ++ MC D WRWQ  NP G+
Sbjct: 305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344


>BC001273-1|AAH01273.1|  348|Homo sapiens UDP-galactose-4-epimerase
           protein.
          Length = 348

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A  +A+ SLA+EELGW+  L ++ MC D WRWQ  NP G+
Sbjct: 305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344


>AL031295-16|CAB40159.1|  348|Homo sapiens UDP-galactose-4-epimerase
           protein.
          Length = 348

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A  +A+ SLA+EELGW+  L ++ MC D WRWQ  NP G+
Sbjct: 305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344


>AL031295-13|CAI23149.1|  108|Homo sapiens UDP-galactose-4-epimerase
           protein.
          Length = 108

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A  +A+ SLA+EELGW+  L ++ MC D WRWQ  NP G+
Sbjct: 65  AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 104


>AF022382-1|AAC39645.1|  348|Homo sapiens UDP-galactose 4' epimerase
           protein.
          Length = 348

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +2

Query: 101 APMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 220
           A  +A+ SLA+EELGW+  L ++ MC D WRWQ  NP G+
Sbjct: 305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,669,457
Number of Sequences: 237096
Number of extensions: 1901007
Number of successful extensions: 4498
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4498
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)