Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_N24
(975 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.23
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.23
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.23
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.41
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.41
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.54
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.2
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 30 2.2
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 30 2.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.9
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 30 2.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.0
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.6
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP G P PP PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPP 777
Score = 31.5 bits (68), Expect = 0.94
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP + PP PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP + PP PP
Sbjct: 711 GGP---PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP G P PP PP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPP 777
Score = 31.5 bits (68), Expect = 0.94
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP + PP PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP + PP PP
Sbjct: 711 GGP---PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP G P PP PP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPP 360
Score = 31.5 bits (68), Expect = 0.94
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP + PP PP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
GGP PP G G PPPP + PP PP
Sbjct: 294 GGP---PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.41
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXW-GGGGXXPRDXXXXPGGG 853
G GG G GG G W GGGG RD GGG
Sbjct: 214 GSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGG 251
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 957 GGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
GGWG GG + WGGGG R GGG G
Sbjct: 231 GGWGGGGGGRDRDR-GGWGGGGGG-RGYGGGGGGGGYG 266
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.7 bits (71), Expect = 0.41
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
G GG+G GG G +GGGG D GGG G
Sbjct: 133 GGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGG 172
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
G GG G GG G P GGG P GGG G
Sbjct: 209 GMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGGGGGGG 248
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
G GG+G GG G GGG D P GG G
Sbjct: 192 GMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGG 231
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGG 853
G GGWG G G WGGGG P GGG
Sbjct: 21 GPGGWGGGPGRWGGWGGNRWGGGG-GPGGWGNNGGGG 56
Score = 31.9 bits (69), Expect = 0.71
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 966 KGXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
+G G WG GG G WGG G D GGG G
Sbjct: 63 RGGGDWGGNNGGGGN-----WGGNGGGRGDWGGNGGGGRGG 98
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
G G G RGG G+ P GGG GGG +G
Sbjct: 133 GGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRG 172
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
G G G RG G WGG G R GGG G
Sbjct: 138 GGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGG 177
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
G G WG G G WGGGG GGG G
Sbjct: 100 GRGDWGGNNNGGG----GNWGGGGNNDGGWGGNNGGGGGG 135
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 853 PPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
PP G P PPPP G+ P PP P
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 846 PXXPXRXGXPNPGXXXPPPPKXGGXFAXNPPXXTPXXLPLYP 971
P P P P PPPP+ G PP +P L P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 853 PPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
PP G P PPPP G+ P PP P
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 846 PXXPXRXGXPNPGXXXPPPPKXGGXFAXNPPXXTPXXLPLYP 971
P P P P PPPP+ G PP +P L P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 853 PPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
PP G P PPPP G+ P PP P
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 846 PXXPXRXGXPNPGXXXPPPPKXGGXFAXNPPXXTPXXLPLYP 971
P P P P PPPP+ G PP +P L P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1
Query: 972 PDKGXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
P G GG+G RGG G GGGG D GGG +G
Sbjct: 311 PMGGRGGFGGDRGGYG-------GGGGRGGFDGGRGGGGGFRG 346
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 862 GXGXXIPGXXXPPPPXXGAXLPXTPPXXPP 951
G P PPPP G P PP PP
Sbjct: 31 GCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 950 GGXXGGVXGKXAPXFGGGGXXXPGIXXPXPXGGXRXXGP 834
GG G G P GG G PG+ P GG GP
Sbjct: 41 GGAGLGGPGIGGPGLGGPGIGGPGLGGPGVGGGPGAFGP 79
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 950 GGXXGGVXGKXAPXFGGGGXXXPGIXXPXPXGGXRXXGP 834
GG G G P GG G PG+ P GG GP
Sbjct: 41 GGAGLGGPGIGGPGLGGPGIGGPGLGGPGVGGGPGAFGP 79
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +3
Query: 846 PXXPXRXGXPNPGXXXPPPP---KXGGXFAXNPPXXTPXXLP-LYP 971
P P R G P G PPPP + G PP P P +YP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 364
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +3
Query: 846 PXXPXRXGXPNPGXXXPPPP---KXGGXFAXNPPXXTPXXLP-LYP 971
P P R G P G PPPP + G PP P P +YP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 374
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -1
Query: 966 KGXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGGXKGEXXAXXFPXRG 811
+G GG+ RGG P GGGG D PGG G+ RG
Sbjct: 9 RGGGGFRGGRGGGSGFTPRG-GGGGFRGGDRGRSPGGFRGGDRGRSSSGFRG 59
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 877 IPGXXXPPPPXXGAXLPXTPPXXPPXXXPFI 969
+P PPPP A P PP PP P +
Sbjct: 105 VPAPCCPPPPAPAA--PCCPPPPPPTPSPLV 133
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = -1
Query: 963 GXGGWGXXRGGX--GQXXPXXWGGGGXXPRDXXXXPGGGXKG 844
G GWG RGG WGG G GGG G
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGG 101
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 963 GXGGWGXXRGGXGQXXPXXWGGGGXXPRDXXXXPGGG 853
G GG G RGG G GGGG GGG
Sbjct: 96 GGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 832 GGPFXLXPPXGXGXXIPGXXXPPPPXXGAXLPXTPPXXPPXXXP 963
GGP PP G PG PP G P PP P P
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGP-PPPGGPGAYGP 446
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +3
Query: 846 PXXPXRXGXPN--PGXXXPPPPKXGGXFAXNPPXXTPXXLP 962
P P G P PG PPPP G + P P P
Sbjct: 417 PGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 898 PPPXXGAXLPXTPPXXPPXXXPFI 969
PPP +P PP PP PF+
Sbjct: 777 PPPFFALPVPPPPPVPPPPPPPFL 800
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 963 GXGGWGXXRGGX--GQXXPXXWGGGG 892
G G G +GG GQ P WGGGG
Sbjct: 228 GWGNQGGQQGGGRGGQQGPGGWGGGG 253
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +1
Query: 838 PFXLXPPXGXGXXIPGXXXPPPPXXG---AXLPXTPPXXP 948
P + PP G G +P PPPP G + L PP P
Sbjct: 660 PMPVPPPGGLGGFMP-PPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +1
Query: 838 PFXLXPPXGXGXXIPGXXXPPPPXXG---AXLPXTPPXXP 948
P + PP G G +P PPPP G + L PP P
Sbjct: 660 PMPVPPPGGLGGFMP-PPPPPPPMPGDLSSLLAAAPPPPP 698
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,925,308
Number of Sequences: 27780
Number of extensions: 221614
Number of successful extensions: 1494
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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