Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_N22
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024815-1|ABB88220.1| 344|Caenorhabditis elegans Hypothetical ... 34 0.11
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 32 0.59
U64855-2|AAB04981.2| 1080|Caenorhabditis elegans Importin beta f... 31 0.78
AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical... 31 0.78
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 31 1.0
AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally sym... 31 1.0
AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally sym... 31 1.0
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 31 1.4
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 1.4
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 1.4
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 30 1.8
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 30 1.8
Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 29 3.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 4.1
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 4.1
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 4.1
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 29 4.1
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 29 5.5
U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical p... 28 7.2
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 7.2
U23454-7|AAC46515.1| 612|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 28 7.2
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 9.5
U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila odd-... 28 9.5
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 9.5
AC084158-9|AAK68559.2| 465|Caenorhabditis elegans Hypothetical ... 28 9.5
>AC024815-1|ABB88220.1| 344|Caenorhabditis elegans Hypothetical
protein Y54F10BL.1 protein.
Length = 344
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 444 NEIMNFNVFKTCVDRVEENFQKYLETYQIALDKKTELKY-DQDETNQNLYDEKFFEEHRK 620
++IM + F++C +V N +T IA K E D+ E +L D+KF E +K
Sbjct: 250 DDIMRRSTFQSCTIKVGTNNMNPSDTINIAKVFKPEYAGGDEFEIKYSLDDDKFMIECQK 309
Query: 621 IQSSNTSTNVYQ-DKNNEHQVLMGKS 695
IQ +N + + K + H +L K+
Sbjct: 310 IQLNNWNYYCFSVRKLSSHDILYIKN 335
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 525 QIALDKKTELKYDQDETNQNLYDEKFFEEHRKIQSSNTSTNVYQDKNNEHQVLMGKSKEK 704
++A K+ + ++DE +N +DE E+H+K + S +ST D+++E M K K+
Sbjct: 716 EVAETKEESVPVEEDEEPEN-HDEDV-EDHKKEKESQSSTINTADEDDESSKKMKKHKKS 773
Query: 705 K 707
K
Sbjct: 774 K 774
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 31.9 bits (69), Expect = 0.59
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 696 KEKKDTLQFICDFCSKSFKHRYXLVDH 776
K K+D QF C C K ++H + L+ H
Sbjct: 297 KSKEDRFQFACVLCGKKYQHYHWLLKH 323
>U64855-2|AAB04981.2| 1080|Caenorhabditis elegans Importin beta
family protein 4,isoform a protein.
Length = 1080
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 465 VFKTCV-DRVEENFQKYLETYQ-IALDKKTELKYDQDETNQNLYDEK 599
VF+T + + + ENF LE Y+ IAL TE+ Q ETN YDEK
Sbjct: 240 VFETNITELLSENFLS-LEVYRVIALQCLTEISQIQVETNDPSYDEK 285
>AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical
protein K11D12.9 protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.78
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 471 KTCVDRVEENFQKYLETYQIALDKKTELKYDQDETNQNLYDEKFFEEHRK 620
K C D + ++ +ET ALDK T Y Q Q ++D+K EHRK
Sbjct: 171 KDCKDEMNRLMEERVETAD-ALDKLTIQNYRQQ---QEIHDQKELSEHRK 216
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 636 TSTNVYQDKNN----EHQVLMGKSKEKKDTLQFICDFCSKSFKHRYXLVDH 776
TS+NV + N+ HQ L G + + QF C+ C K F ++ L H
Sbjct: 178 TSSNVCEPANSLSSTRHQTLTGSNGVRPVNRQFKCEICEKQFANKPNLNRH 228
>AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform b protein.
Length = 339
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +3
Query: 567 DETNQNLYDEKFFEEHRKIQSSNTSTNVYQDK--NN---EHQVLMGKSKEKKDTLQFICD 731
DE + + Y F EE ++ T V+Q N ++ L + D F CD
Sbjct: 24 DEQDYSQYQMGFPEEDEMVEGMMTPRAVHQCNVCNKIFVSYKGLQQHAVIHTDQKPFRCD 83
Query: 732 FCSKSFKHRYXLVDH 776
CSKSF+ + L +H
Sbjct: 84 ICSKSFRFKSNLFEH 98
>AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform a protein.
Length = 365
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +3
Query: 567 DETNQNLYDEKFFEEHRKIQSSNTSTNVYQDK--NN---EHQVLMGKSKEKKDTLQFICD 731
DE + + Y F EE ++ T V+Q N ++ L + D F CD
Sbjct: 50 DEQDYSQYQMGFPEEDEMVEGMMTPRAVHQCNVCNKIFVSYKGLQQHAVIHTDQKPFRCD 109
Query: 732 FCSKSFKHRYXLVDH 776
CSKSF+ + L +H
Sbjct: 110 ICSKSFRFKSNLFEH 124
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 726 CDFCSKSFKHRYXLVDH 776
CD C K+FKH++ L +H
Sbjct: 511 CDICEKAFKHKHHLTEH 527
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 726 CDFCSKSFKHRYXLVDH 776
CD C K+FKH++ L +H
Sbjct: 511 CDICEKAFKHKHHLTEH 527
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 726 CDFCSKSFKHRYXLVDH 776
CD C K+FKH++ L +H
Sbjct: 511 CDICEKAFKHKHHLTEH 527
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 591 DEKFFEEHRKIQSSNTSTNVYQDKNNEHQVLMGKSKEKKDTLQFI--CDFCSKSFKHRYX 764
D+++ EE + SN+ + + + E + + + +++ T C FC K F++
Sbjct: 34 DDEYREEDGNSERSNSKVCIEEVEEVEKEEIASRKRKRGKTKDEFHPCPFCEKKFRYPNK 93
Query: 765 LVDHI 779
L +HI
Sbjct: 94 LREHI 98
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 30.3 bits (65), Expect = 1.8
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +3
Query: 336 SETEESKAIRNILLCCTSIKLKADDPLPKMLCESCYNEIMNFNVFKTCVDRVEENFQKYL 515
S TE SK + N S+ + DP + + E N N++K C + Q+Y
Sbjct: 63 SATEASKVVNNAF----SLLM---DPAKRRQYDLQNAETSNENLYKRCNRNKNQRKQEYS 115
Query: 516 ETYQIALDKKTELKYDQDETNQNLYDEKFFEEHRK--IQSSNTSTNVYQDKNNEHQVLMG 689
T + K ++E N + + + H+ ++ N +N Y ++NN +
Sbjct: 116 NTQRQNHKKSEPSNGKRNEQNSSFKQDHNSKNHQSNHQKTKNKKSNPYSNQNNFNNTRKD 175
Query: 690 KSKEK 704
+EK
Sbjct: 176 YREEK 180
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Frame = +3
Query: 297 LSDIAEKTCYNIFSETEESKAIRNILLCCTSI--KLKADDPLPKML---CESCYNE--IM 455
+SD + C I ++ +E + L+ + K +P+ K+ C C + +
Sbjct: 238 MSDYVQSVCLEIANKDKEYQKSFTALVAINKKDEETKCQEPVEKIFELTCSECMTKQTVE 297
Query: 456 NFNVFKTCVDRVEENFQKYLETYQI-ALDKKT 548
F KTC++ V + LET +I A+D +T
Sbjct: 298 RFRCCKTCIEVVGKLVDNLLETTEIDAVDLET 329
>Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical
protein F52F12.4 protein.
Length = 318
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/81 (20%), Positives = 37/81 (45%)
Frame = +3
Query: 534 LDKKTELKYDQDETNQNLYDEKFFEEHRKIQSSNTSTNVYQDKNNEHQVLMGKSKEKKDT 713
+D +T+ YD ++ ++ + +E + + NV ++ L S DT
Sbjct: 4 IDDRTDPSYDGEDYEASITFGTYQQEEVAPFAVH-QCNVCNKMFMNYKGLQQHSVIHTDT 62
Query: 714 LQFICDFCSKSFKHRYXLVDH 776
+ICD C + F+++ + +H
Sbjct: 63 KPYICDVCGRGFRYKSNMFEH 83
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +3
Query: 420 KMLCESCYNEIMNFNVFKTCVDRVEENFQKYLETYQIALDKKTELKYDQDETNQNLYDEK 599
K+ E+ N MNF + +N +KY + + K E + + + + ++
Sbjct: 245 KLKVENLGNLEMNFETVYQDLQTANDNMEKYKSSESERIQKLLEEQKAEILKEEEIKRKE 304
Query: 600 FFEEHRKIQSSNTSTNVYQDKNNE 671
E+ +KIQ NV +D+ E
Sbjct: 305 LSEQIKKIQELKDRQNVEKDREIE 328
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Frame = +3
Query: 471 KTCVDRVEENFQKYLETYQIALDKKTELKYDQDETNQNLYDEKFFEEHRKIQSSNTSTNV 650
K+ R +E Y +I L +E YD +E N +++ + N
Sbjct: 82 KSLYQRAKEGIPSYKGKPEIKLPTTSEQYYDLEEVLMN---------PARMEGRELTLNA 132
Query: 651 YQDKNNEHQVLMGKSKEKKDTLQ----FICDFCSK 743
Y N++ VL GKS + D + F CD C +
Sbjct: 133 YDAVRNKYNVLPGKSVCEADLQKVIGSFSCDVCQE 167
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 540 KKTELKYDQDETNQNLYDEKFFEEHRKIQSSNTSTNVYQDK 662
+KT + +Q+E N+ + K+ E+H+K+ N Y+ K
Sbjct: 898 RKTMEEMEQNEEIFNVLERKYNEQHKKVMKMNDVLREYERK 938
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 564 QDETNQNLYDEKFFEEHRKIQSSNTSTNVYQDKNNEHQVLMGKSKEKK 707
Q+ T+QNLY E+HR+ Q +YQ ++ +HQ + +E++
Sbjct: 175 QEVTHQNLY-----EQHRRQQQLIREQQLYQHQHQQHQQQQQQPQEQQ 217
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 564 QDETNQNLYDEKFFEEHRKIQSSNTSTNVYQDKNNEHQVLMGKSKEKK 707
Q+ T+QNLY E+HR+ Q +YQ ++ +HQ + +E++
Sbjct: 175 QEVTHQNLY-----EQHRRQQQLIREQQLYQHQHQQHQQQQQQPQEQQ 217
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 564 QDETNQNLYDEKFFEEHRKIQSSNTSTNVYQDKNNEHQVLMGKSKEKK 707
Q+ T+QNLY E+HR+ Q +YQ ++ +HQ + +E++
Sbjct: 175 QEVTHQNLY-----EQHRRQQQLIREQQLYQHQHQQHQQQQQQPQEQQ 217
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +3
Query: 480 VDRVEENFQKYLETYQIALDKKTELKYDQDETNQNLYDEKFFEEHRKIQSSNTSTNVYQD 659
+ R +E K E + +A KK E + +T+++ EK + H+K + + Y D
Sbjct: 145 IAREKEEKNKQREKH-LATHKKAEEFAKKVQTDKDEQREKHLDTHKKAEQNAQDNQKYHD 203
Query: 660 KNNEHQVLMGKSKEKKD 710
+ + + K E+ +
Sbjct: 204 EERKKHIETQKKAEENE 220
>U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical
protein K06A1.6 protein.
Length = 937
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 519 TYQIALDKKTELKYDQDETNQNLYDEKFFEEHRKIQSSNTSTNVYQDKNNEHQVLMGKSK 698
T++ KKT K D + + K+ E R NT +Q K + + K
Sbjct: 281 TFRDYATKKTPSKESTDGLTAHHWVHKWRHEGR----CNTCAKSFQQK------MFFQGK 330
Query: 699 EKKDTLQFICDFCSKSF 749
EKK+T+ C +C +S+
Sbjct: 331 EKKETIAVTCSWCKESY 347
>Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 381 CTSIKLKADDPLPKMLCESCYNEIMNFNVFKTCVDRVEENFQKYLETYQIA-LDKKTELK 557
C S+ DD P + C++ M + D +N K+ ET QIA + E+
Sbjct: 124 CYSVLTAEDDGGPTTVTRGCHSRKMVMHHMSKNEDDKYQNNTKWRETKQIAEMPSCAEIL 183
Query: 558 YDQDETN 578
DQ + N
Sbjct: 184 KDQPKVN 190
>Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 381 CTSIKLKADDPLPKMLCESCYNEIMNFNVFKTCVDRVEENFQKYLETYQIA-LDKKTELK 557
C S+ DD P + C++ M + D +N K+ ET QIA + E+
Sbjct: 124 CYSVLTAEDDGGPTTVTRGCHSRKMVMHHMSKNEDDKYQNNTKWRETKQIAEMPSCAEIL 183
Query: 558 YDQDETN 578
DQ + N
Sbjct: 184 KDQPKVN 190
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +3
Query: 492 EENFQKYLETYQIALDKKTELKYDQDETNQNLYDEKFFEEHRKIQSSNTSTNVYQDKNNE 671
E +++ +E + AL +K EL Q + Q DE E H K + S TS V+Q+ ++
Sbjct: 956 ESKWKEQIEDLENALQRKNEL-IQQLQDRQT--DESTSEPHTKKRMSITSHGVFQNFVSQ 1012
Query: 672 HQVLMGKSKEKK 707
+ ++ EK+
Sbjct: 1013 MKDKREEASEKR 1024
>U23454-7|AAC46515.1| 612|Caenorhabditis elegans Hypothetical
protein C10A4.1 protein.
Length = 612
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/91 (24%), Positives = 38/91 (41%)
Frame = +3
Query: 411 PLPKMLCESCYNEIMNFNVFKTCVDRVEENFQKYLETYQIALDKKTELKYDQDETNQNLY 590
PL L + C I + FK DR+++ +KY + + +Y +D + +
Sbjct: 386 PLCYALIDHCKESIDHPEAFKAIEDRMQKELKKYSACRYLQFATLLDPRY-KDHFCTDEF 444
Query: 591 DEKFFEEHRKIQSSNTSTNVYQDKNNEHQVL 683
F EE K +VY +NE ++L
Sbjct: 445 KHMFIEEFEKCNED----DVYITSDNEVRLL 471
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 705 KDTLQFICDFCSKSFKHRYXLVDHI 779
+DT +F C CS++F Y L H+
Sbjct: 159 EDTKKFSCSICSRAFHQSYNLAFHM 183
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Frame = +3
Query: 498 NFQKYLETYQIALDKKTELKYDQ-----DETNQNLYDE---KFFEEHRKIQSSNTSTNVY 653
N Q Y ++ Q L K EL YDQ D++N Y+E K+++ + + NV
Sbjct: 496 NHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHRESKLNEDIPKNVQ 555
Query: 654 Q--DKNNEHQVLMGKSKEKK 707
+ K+ E + L K EKK
Sbjct: 556 KMIAKHREAKGLPPKEDEKK 575
>U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila
odd-skipped-like protein1 protein.
Length = 242
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 612 HRKIQS---SNTSTNVYQDKNNEHQVLMGKSKEKKDTLQFICDFCSKSFKHRYXLVDH 776
H +IQS SN T + N E + K+ +FIC +C++ F Y L+ H
Sbjct: 91 HLQIQSQLFSNLGTPWFL--NPEQHNKTNNAIRKRPKKEFICKYCARHFTKSYNLMIH 146
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Frame = +3
Query: 498 NFQKYLETYQIALDKKTELKYDQ-----DETNQNLYDE---KFFEEHRKIQSSNTSTNVY 653
N Q Y ++ Q L K EL YDQ D++N Y+E K+++ + + NV
Sbjct: 496 NHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQHRESKLNEDIPKNVQ 555
Query: 654 Q--DKNNEHQVLMGKSKEKK 707
+ K+ E + L K EKK
Sbjct: 556 KMIAKHREAKGLPPKEDEKK 575
>AC084158-9|AAK68559.2| 465|Caenorhabditis elegans Hypothetical
protein Y69A2AR.15 protein.
Length = 465
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 720 IAMCLFSLWISPLKLDVHYFYLGIHL*MYYLTVFYDVLQK 601
+A+C + ISPL ++Y+ L HL + T+F LQK
Sbjct: 92 MAICSLLMAISPLPFTIYYYNLSHHL-DFNQTLFLCYLQK 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,729,707
Number of Sequences: 27780
Number of extensions: 345230
Number of successful extensions: 1358
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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