Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_N22
         (844 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    27   0.22 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   1.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   2.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.2  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 699 EKKDTLQFICDFCSKSFKHRYXLVDH 776
           E+ DTL ++C+FC++ ++ +  L  H
Sbjct: 30  EQSDTL-YVCEFCNRRYRTKNSLTTH 54


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 609 EHRKIQSSNTSTNVYQDKNNEHQVLMGKS-KEKKDTLQFICDFCSKSFKHRY 761
           EHR  +  +T+   YQD++ +    +  S ++ K+  +      S+ F+ RY
Sbjct: 417 EHRPFEPKSTAVQKYQDQDYQPIYFVADSFEDAKEKFRRWVSTMSRPFEVRY 468


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 612 HRKIQSSNTSTNVYQDKNNEH 674
           +R   SSN   N Y+++NN H
Sbjct: 102 NRSSTSSNDPKNQYKNQNNNH 122


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 720 FICDFCSKSFKHRYXLVDH 776
           + CD C KSF + + L  H
Sbjct: 232 YTCDICGKSFGYNHVLKLH 250



 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 726 CDFCSKSFKHRYXLVDH 776
           C++CSKSF  +  L  H
Sbjct: 122 CEYCSKSFSVKENLSVH 138



 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 726 CDFCSKSFKHRYXLVDHI 779
           CD C ++F+H   L  H+
Sbjct: 150 CDVCERAFEHSGKLHRHM 167


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -1

Query: 436 DSHSIFGKGSSAFSFIDVQHSKIFLIALD 350
           D H IFG  S   + +   H K   I LD
Sbjct: 91  DVHPIFGTISDLDNLVSAAHEKGLKIILD 119


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -1

Query: 436 DSHSIFGKGSSAFSFIDVQHSKIFLIALD 350
           D H IFG  S   + +   H K   I LD
Sbjct: 91  DVHPIFGTISDLDNLVSAAHEKGLKIILD 119


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 180 LLFIY*NLIYKYFFSKEYILAIMAWHEDLIN 272
           LL+ +  L+ +   SKEY+++IM  H D  N
Sbjct: 219 LLYNHARLMSQDNHSKEYLVSIMFSHYDRNN 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,659
Number of Sequences: 438
Number of extensions: 4226
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)