Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_N21
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.71 
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   3.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   3.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -3

Query: 131 PHL-QLRQQAWPPL*AVLEPIFKPGSRK 51
           PHL  L  + W PL + L PIF  G  K
Sbjct: 118 PHLLNLEVERWRPLRSRLSPIFTSGKLK 145


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 796 FDHSLVDCXLIGFALLRWNVFLFFCGKDVITLFA 695
           FD +L+DC   G   L   V ++    +  TLFA
Sbjct: 29  FDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFA 62


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 796 FDHSLVDCXLIGFALLRWNVFLFFCGKDVITLFA 695
           FD +L+DC   G   L   V ++    +  TLFA
Sbjct: 45  FDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFA 78


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 16/77 (20%), Positives = 35/77 (45%)
 Frame = +3

Query: 579 SAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 758
           +A+ S PPP F  +  +  + S ++++ R  +   +  +A   M  +P    N  ++S  
Sbjct: 374 TALMSQPPPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSAGAPMPPIP----NMSNMSGM 429

Query: 759 KPIRXQSTRL*SKPSEP 809
            P+      + + P+ P
Sbjct: 430 PPLPNMPGSMPTMPTMP 446


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,491
Number of Sequences: 438
Number of extensions: 4613
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)