Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_N17
         (938 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    34   0.13 
AL022716-5|CAB97232.1|  291|Caenorhabditis elegans Hypothetical ...    32   0.68 
Z68215-7|CAA92453.1|  289|Caenorhabditis elegans Hypothetical pr...    31   0.90 
U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astaci...    29   3.6  

>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
 Frame = +3

Query: 708 FLAXPPRKXXXKXPXFXGGPPPPXXKXXPG---PXPXXXPXGXLLXSXGGXRXNHKXXGN 878
           F A PP++     P   GGPPPP     PG   P P   P G             +  G 
Sbjct: 348 FGAPPPQQFHAPSPQSFGGPPPP-VSSAPGNFAPPPQSGPPGAFAPPPSAF-GAPQGPGG 405

Query: 879 PGGXXXGXFGPPXXG 923
           PGG     +GPP  G
Sbjct: 406 PGG-----YGPPPPG 415


>AL022716-5|CAB97232.1|  291|Caenorhabditis elegans Hypothetical
           protein C24F3.6 protein.
          Length = 291

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
 Frame = +3

Query: 711 LAXPPRKXXXKXPXFXGGPPPPXXKXXP-GPXPXXXPXGXLLXSXGGXRXNHKXXGNPG- 884
           L  PP K   + P    GPP P     P GP     P G       G   N    G PG 
Sbjct: 132 LTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEG-----PNGEPGNKGPAGPPGP 186

Query: 885 GXXXGXFGPP 914
           G   G  GPP
Sbjct: 187 GGKPGPAGPP 196


>Z68215-7|CAA92453.1|  289|Caenorhabditis elegans Hypothetical
           protein C53B4.5 protein.
          Length = 289

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
 Frame = +3

Query: 711 LAXPPRKXXXKXPXFXGGPPPPXXKXXP-GPXPXXXPXGXLLXSXGGXRXNHKXXGNPG- 884
           +  PP K   + P    GPP P     P GP     P G       G   N    G PG 
Sbjct: 130 ITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEG-----PNGTAGNKGPAGPPGP 184

Query: 885 GXXXGXFGPP 914
           G   G  GPP
Sbjct: 185 GGKPGPAGPP 194


>U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astacin
           protease protein33 protein.
          Length = 644

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +3

Query: 702 DFFLAXPPRKXXXKXPXFXGGPPPPXXKXXPGPXPXXXP 818
           DFF   PP       P    GPPPP  +   GP P   P
Sbjct: 19  DFFERPPPPDWFFPGPLRPWGPPPPWHRNR-GPPPFGPP 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,470,300
Number of Sequences: 27780
Number of extensions: 245627
Number of successful extensions: 1397
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)