Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_N15
         (925 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    23   5.2  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    23   5.2  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    23   5.2  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    23   5.2  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    23   5.2  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    23   5.2  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    23   5.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   5.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   5.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   5.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   5.2  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   5.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   5.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   5.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   5.2  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    23   5.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   5.2  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   9.0  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   9.0  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   9.0  

>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 130 PRFIPPDMYRLRPPPNP 146


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 130 PRFIPPDMYRLRPPPNP 146


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 130 PRFIPPDMYRLRPPPNP 146


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 130 PRFIPPDMYRLRPPPNP 146


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 130 PRFIPPDMYRLRPPPNP 146


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 130 PRFIPPDMYRLRPPPNP 146


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 130 PRFIPPDMYRLRPPPNP 146


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 852  KKXXPPPXPPPXXGG 896
            ++  PPP PPP   G
Sbjct: 1351 RQQQPPPPPPPPSSG 1365


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 379 PRFIPPDMYRLRPPPNP 395


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 379 PRFIPPDMYRLRPPPNP 395


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 379 PRFIPPDMYRLRPPPNP 395


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 379 PRFIPPDMYRLRPPPNP 395


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 379 PRFIPPDMYRLRPPPNP 395


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 379 PRFIPPDMYRLRPPPNP 395


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 378 PRFIPPDMYRLRPPPNP 394


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 363 PRFIPPDMYRLRPPPNP 379


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 828 PPFXPPRXKKXXPPPXP 878
           P F PP   +  PPP P
Sbjct: 379 PRFIPPDMYRLRPPPNP 395


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 816 PXXXPPFXPPRXKKXXPPPXP 878
           P   P F PP   +  PP  P
Sbjct: 153 PTPFPRFIPPNAYRFRPPQNP 173


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 816 PXXXPPFXPPRXKKXXPPPXP 878
           P   P F PP   +  PP  P
Sbjct: 153 PTPFPRFIPPNAYRFRPPQNP 173


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 816 PXXXPPFXPPRXKKXXPPPXP 878
           P   P F PP   +  PP  P
Sbjct: 391 PTPFPRFIPPNAYRFRPPQNP 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,340
Number of Sequences: 438
Number of extensions: 3813
Number of successful extensions: 68
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)