Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_N14
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0313 + 3447065-3448204                                           30   2.8  
04_04_0363 + 24720054-24720132,24720307-24720804,24720902-247214...    29   4.9  
03_03_0071 + 14257840-14257953,14259031-14259167,14259196-142592...    29   4.9  
04_04_0529 - 25997736-25998055,25998441-25998804,25999563-259996...    29   6.5  
02_04_0459 + 23117439-23117966                                         29   6.5  
07_03_0203 + 15138864-15140452,15140629-15140726,15141924-151422...    28   8.5  

>10_01_0313 + 3447065-3448204
          Length = 379

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 312 IGYVFPLFNNPVSAFYKALLANAATSALRLHQRIPAREISLSREFM 449
           +G+ FP   +PV +F     +  A   L  H+ +P REI L  E +
Sbjct: 80  LGFFFPYDFDPVFSFNAGFRSTTAQHHLPAHRFLPEREIGLRWEIV 125


>04_04_0363 +
           24720054-24720132,24720307-24720804,24720902-24721436,
           24721844-24721959,24722512-24723009,24723102-24723637
          Length = 753

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +1

Query: 577 PWTILGYSWSEFVVGGPSAHLPGRVPVAEHSPGRGACRDR---AVPGRTY 717
           PWTI+GY+ S   V      +PG     E   G  A   +    VPGR+Y
Sbjct: 230 PWTIMGYTKSVKYVDAAHYAVPGGARAVELVAGMEAALVQEVCTVPGRSY 279


>03_03_0071 +
           14257840-14257953,14259031-14259167,14259196-14259246,
           14260396-14260499,14260887-14261020
          Length = 179

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 465 EDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLDY 587
           ED   +L + LIFM  +  +LIL  +F+  + HA     +Y
Sbjct: 71  EDHGQFLSHVLIFMEPMNVILILKTLFVITISHAEEAVKEY 111


>04_04_0529 - 25997736-25998055,25998441-25998804,25999563-25999675,
            25999880-25999989,26000155-26000311,26000390-26000915,
            26001101-26001265,26002470-26002589,26003022-26003093,
            26003422-26003499,26003965-26004057,26004491-26004647,
            26005351-26005589,26006907-26007050,26007637-26007666,
            26010610-26010993,26011486-26011554,26012353-26012418,
            26013166-26013255,26013583-26013628,26014318-26014419,
            26014552-26014694
          Length = 1195

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -2

Query: 388  EVAAFASNAL*NADTGLLNNGNTYPMVHSTVITRTPQRATSILL 257
            E  A + N +   DT  +N+GNT P  + T+ + TP + T  L+
Sbjct: 961  EDIARSVNVVHVVDTTTVNSGNTEPSSYVTLFSNTPGKLTKELV 1004


>02_04_0459 + 23117439-23117966
          Length = 175

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = +1

Query: 580 WTILGYSWSEFVVGGPSAHLPGRVPVAEHSPGRGACRDRAVP----GRTYNGIVRSLRLD 747
           W      W  + +   +  L   + +A+H PG  A ++RA      G    G+ R+    
Sbjct: 93  WDFAQSLWDTYELVAVARRLESGLVLADHHPGAAAAQERAATTREGGGGGGGVKRARESS 152

Query: 748 ESVRILLLR 774
            S+R + LR
Sbjct: 153 RSLRSIFLR 161


>07_03_0203 +
           15138864-15140452,15140629-15140726,15141924-15142235,
           15142437-15142749,15144025-15146023,15147033-15147068
          Length = 1448

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +1

Query: 586 ILGYSWSEFV-VGGPSAHLPGRVPVAEHSPGRGACRDRAVPGRTYN-GIVRSL 738
           + G S+S F    GP A  P ++P  EH   +G  R+R +   + + G++ SL
Sbjct: 537 LAGTSFSRFPDTSGPLAASPPQLPYIEHERDKGRKREREMASVSVSTGVMNSL 589


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,511,931
Number of Sequences: 37544
Number of extensions: 497867
Number of successful extensions: 1453
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)