Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_N13
         (897 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK024029-1|BAB14788.1|  237|Homo sapiens protein ( Homo sapiens ...    33   1.9  
BC015044-1|AAH15044.1|  351|Homo sapiens modulator of apoptosis ...    32   3.2  
AF305550-1|AAG31786.1|  351|Homo sapiens MAP-1 protein.                32   3.2  
BC051337-1|AAH51337.1|  332|Homo sapiens interleukin 9 receptor ...    31   7.5  

>AK024029-1|BAB14788.1|  237|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13967 fis, clone Y79AA1001402, weakly similar to
           Homo sapiens paraneoplastic cancer-testis-brain antigen
           (MA4) ).
          Length = 237

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 21/80 (26%), Positives = 34/80 (42%)
 Frame = +2

Query: 86  RWTFKDRQRIDAFEMWCWRRMPRILRTARRTNISILKQLKIEKTQRLSTTCLQRILRYFG 265
           RW F   Q I A+++    +  R+L + R   + +++ LKI         CLQ +   FG
Sbjct: 69  RWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEVFG 128

Query: 266 HVARRDTTNVERLVVNGKIE 325
                    V+ L  + K E
Sbjct: 129 VADNPRELQVKYLTTHQKDE 148


>BC015044-1|AAH15044.1|  351|Homo sapiens modulator of apoptosis 1
           protein.
          Length = 351

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +2

Query: 86  RWTFKDRQRIDAFEMWCWRRMPRILRTARRTNISILKQLKIEKTQRLSTTCLQRILRYFG 265
           RW F   Q I A+++    +  R+L + R   + +++ LKI         CLQ +   FG
Sbjct: 183 RWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEVFG 242


>AF305550-1|AAG31786.1|  351|Homo sapiens MAP-1 protein.
          Length = 351

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +2

Query: 86  RWTFKDRQRIDAFEMWCWRRMPRILRTARRTNISILKQLKIEKTQRLSTTCLQRILRYFG 265
           RW F   Q I A+++    +  R+L + R   + +++ LKI         CLQ +   FG
Sbjct: 183 RWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEEVFG 242


>BC051337-1|AAH51337.1|  332|Homo sapiens interleukin 9 receptor
           protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 20/50 (40%), Positives = 30/50 (60%)
 Frame = -1

Query: 453 IPSTSCLHRSRSVAWWSASLTGIFNSSAIWSDHCLGPPHLDLPSILPFTT 304
           + +T+CL  SRS AWW+ S T   ++S I S HC+    +  P++ P TT
Sbjct: 156 LSTTACLGGSRS-AWWTRS-TCPGDTSNISSGHCILTWSIS-PALEPMTT 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,514,361
Number of Sequences: 237096
Number of extensions: 2206364
Number of successful extensions: 3889
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3889
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)