Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_N11
         (990 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB020717-1|BAA74933.2| 1315|Homo sapiens KIAA0910 protein protein.     34   0.92 
M63175-1|AAA36671.1|  323|Homo sapiens autocrine motility factor...    31   6.5  
L35233-1|AAA79362.1|  323|Homo sapiens autocrine motility factor...    31   6.5  
AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    31   6.5  

>AB020717-1|BAA74933.2| 1315|Homo sapiens KIAA0910 protein protein.
          Length = 1315

 Score = 33.9 bits (74), Expect = 0.92
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
 Frame = +3

Query: 684  PLXSXXP*PTXPEXXXRSPXRLXXPXXPXTXNXXAV-SPPXXXPIXPPXRSHPXXXEPPP 860
            P  S  P P+ P    R+P R   P    +    A  + P   P+ PP R  P    PPP
Sbjct: 1090 PTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPPPRPVAPPTRPAPPQRPPPP 1149


>M63175-1|AAA36671.1|  323|Homo sapiens autocrine motility factor
           receptor protein.
          Length = 323

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 148 KRRRASXXXLLXTFWRXTQEARRRPSGLCNPYRKGV 41
           +R   S   LL   W+    AR RP+G C P ++G+
Sbjct: 209 RRGVTSVIKLLSLLWKHVDCARARPTGSCTPEQQGI 244


>L35233-1|AAA79362.1|  323|Homo sapiens autocrine motility factor
           receptor protein.
          Length = 323

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 148 KRRRASXXXLLXTFWRXTQEARRRPSGLCNPYRKGV 41
           +R   S   LL   W+    AR RP+G C P ++G+
Sbjct: 209 RRGVTSVIKLLSLLWKHVDCARARPTGSCTPEQQGI 244


>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
           protein.
          Length = 410

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 15/45 (33%), Positives = 16/45 (35%)
 Frame = +3

Query: 798 PXXXPIXPPXRSHPXXXEPPPXXXXLXXXXXXXPKXFXPXPTLPP 932
           P   P+ PP  S P    PPP            P    P P LPP
Sbjct: 312 PPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPP 356


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,509,479
Number of Sequences: 237096
Number of extensions: 1068523
Number of successful extensions: 2384
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2245
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13269380858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)