Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_N10
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 40 0.002
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 40 0.002
Z32683-7|CAA83618.1| 113|Caenorhabditis elegans Hypothetical pr... 32 0.60
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.79
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.79
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.79
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 31 1.0
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 31 1.0
Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 29 4.2
AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical ... 28 7.3
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 28 7.3
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 28 7.3
Z68752-11|CAM82780.1| 324|Caenorhabditis elegans Hypothetical p... 28 9.7
Z68752-10|CAA92986.1| 354|Caenorhabditis elegans Hypothetical p... 28 9.7
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL023840-2|CAM82781.1| 324|Caenorhabditis elegans Hypothetical ... 28 9.7
AL023840-1|CAA19510.1| 354|Caenorhabditis elegans Hypothetical ... 28 9.7
AF016438-12|AAK84532.1| 407|Caenorhabditis elegans Nuclear horm... 28 9.7
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.002
Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 10/229 (4%)
Frame = +2
Query: 164 NDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAYKVVLQS 343
+DP ++ RV+ ++ + + +A L++ + EY ++ F MV A + + Q
Sbjct: 9 SDPALLPRVQAHIRKFPGTKYFKPELVAYDLQQEHPEYQRKNHKVFMGMVREALERI-QL 67
Query: 344 YGLDGASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPTDKAGEPIDI 523
+ AL R +K PAA R+ T +A ++
Sbjct: 68 VAKEENDEKMEEKEAMDDVQEIPIVKALETR--------KRKAPAAGRKSTGQAAAAKEV 119
Query: 524 LSSD--EDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQ-NQPLDKKRKLDSNKS 694
+ SD ED AA +L K + + N +SA + P ++ K S
Sbjct: 120 VLSDDSEDERAARQLEKQIESLKTNRANKTVLNLYTKKSAPSTPVSTPKNQATKKPPGAS 179
Query: 695 GAPKKK-------HETGSAKMVKIGFXDIGGLSDIIMQICDLILHMKLP 820
AP +T S + + F IGG +++C L +H+K P
Sbjct: 180 AAPPALPRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCRLAMHLKRP 228
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.002
Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 10/229 (4%)
Frame = +2
Query: 164 NDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAYKVVLQS 343
+DP ++ RV+ ++ + + +A L++ + EY ++ F MV A + + Q
Sbjct: 9 SDPALLPRVQAHIRKFPGTKYFKPELVAYDLQQEHPEYQRKNHKVFMGMVREALERI-QL 67
Query: 344 YGLDGASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPTDKAGEPIDI 523
+ AL R +K PAA R+ T +A ++
Sbjct: 68 VAKEENDEKMEEKEAMDDVQEIPIVKALETR--------KRKAPAAGRKSTGQAAAAKEV 119
Query: 524 LSSD--EDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQ-NQPLDKKRKLDSNKS 694
+ SD ED AA +L K + + N +SA + P ++ K S
Sbjct: 120 VLSDDSEDERAARQLEKQIESLKTNRANKTVLNLYTKKSAPSTPVSTPKNQATKKPPGAS 179
Query: 695 GAPKKK-------HETGSAKMVKIGFXDIGGLSDIIMQICDLILHMKLP 820
AP +T S + + F IGG +++C L +H+K P
Sbjct: 180 AAPPALPRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCRLAMHLKRP 228
>Z32683-7|CAA83618.1| 113|Caenorhabditis elegans Hypothetical
protein R07E5.11 protein.
Length = 113
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +2
Query: 491 PTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQNQPLDKK 670
P D++GE + + P +P+I + I+ + R TAI+ LK P D
Sbjct: 45 PFDRSGEYDEDVDLAAPPPITPDIPEIPADVLIS--LKNRAEGTAID--LKNLKNPFDDS 100
Query: 671 RKLDSNKSGAPKK 709
+K+D ++ AP K
Sbjct: 101 QKVDESEVEAPLK 113
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 605 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVK 742
A+ N A A+K+Q + LD+K KL++N KS A K K E SA K
Sbjct: 9674 AQINKAAEADAVKKQKE-LDEKNKLEANKKSAAEKLKLEEESAAKSK 9719
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 605 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVK 742
A+ N A A+K+Q + LD+K KL++N KS A K K E SA K
Sbjct: 9694 AQINKAAEADAVKKQKE-LDEKNKLEANKKSAAEKLKLEEESAAKSK 9739
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 605 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVK 742
A+ A A+K+Q + LD+K KL++N KS A K K E SA K
Sbjct: 13327 AQIKKAAGADAVKKQKE-LDEKNKLEANKKSAAGKLKIEEESAAKSK 13372
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 605 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVK 742
A+ N A A+K+Q + LD+K KL++N KS A K K E SA K
Sbjct: 9694 AQINKAAEADAVKKQKE-LDEKNKLEANKKSAAEKLKLEEESAAKSK 9739
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 605 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVK 742
A+ A A+K+Q + LD+K KL++N KS A K K E SA K
Sbjct: 13327 AQIKKAAGADAVKKQKE-LDEKNKLEANKKSAAGKLKIEEESAAKSK 13372
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/94 (22%), Positives = 43/94 (45%)
Frame = +2
Query: 452 KMQDKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIE 631
K+++K+ P + + SS+ED + P+ + + + A++ S + E
Sbjct: 38 KLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKS---RKRAKSESESDE 94
Query: 632 SALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAK 733
S ++ + K+K+D K KKK T S++
Sbjct: 95 SDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSE 128
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/94 (22%), Positives = 43/94 (45%)
Frame = +2
Query: 452 KMQDKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIE 631
K+++K+ P + + SS+ED + P+ + + + A++ S + E
Sbjct: 38 KLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKS---RKRAKSESESDE 94
Query: 632 SALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAK 733
S ++ + K+K+D K KKK T S++
Sbjct: 95 SDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSE 128
>Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical
protein F01G10.9 protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +2
Query: 464 KKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALK 643
KK A+ P D P++++ S + S ++ Q + T + +NS AIE
Sbjct: 142 KKESHATESPEDSLKVPVEVIESRKPLSPPSSSANVSKQRSYTTSSSSSSNS-AIERYNN 200
Query: 644 QQNQPLDKKRKLDSNKSGAPKKKHETGSAK 733
QQN K N+ P + GS K
Sbjct: 201 QQN-----KIGNQDNEEDYPNSMYHRGSRK 225
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 563 PKINDQITITPHIPARTNSTAIESALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKMVK 742
P N ++++ P + E K +P+DKK K+DS K+G T S K+VK
Sbjct: 1158 PVPNKKVSVGAEKPKKKEKVVDEKD-KADGEPVDKKIKVDSKKNGT------TSSEKVVK 1210
>AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical
protein T21D12.12 protein.
Length = 183
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 91 FLQTSTE---TKSLGNEENSQYKAKNFE*SRNSVTCKKLFGRKCGQNVCRCQSNGA 249
F Q T+ + GN Q A++F +N+ TC+ F + C N R QS A
Sbjct: 16 FAQQQTDCFSARDTGNSGCGQQGARSFYFHKNTRTCQPFFYQGCDGNSNRFQSKEA 71
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 461 DKKRPAASRRPTDKAGEPIDILSSD----EDGSAAPKLPKINDQITITPHIPARTNSTAI 628
D ++ T++ E I++ +D ED +A+ + N T TP + T++TA+
Sbjct: 435 DHEKKTEDEDETNEETEKIEVQQADQAEREDDAASSE--GTNRSETATPELA--TDTTAV 490
Query: 629 ESALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKMVKIGFXD 757
+ + +D +GA KKK + +A IG D
Sbjct: 491 AKKTRSAAARRKNTKTVDDEFAGATKKKRGSVTAATAGIGGDD 533
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 461 DKKRPAASRRPTDKAGEPIDILSSD----EDGSAAPKLPKINDQITITPHIPARTNSTAI 628
D ++ T++ E I++ +D ED +A+ + N T TP + T++TA+
Sbjct: 497 DHEKKTEDEDETNEETEKIEVQQADQAEREDDAASSE--GTNRSETATPELA--TDTTAV 552
Query: 629 ESALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKMVKIGFXD 757
+ + +D +GA KKK + +A IG D
Sbjct: 553 AKKTRSAAARRKNTKTVDDEFAGATKKKRGSVTAATAGIGGDD 595
>Z68752-11|CAM82780.1| 324|Caenorhabditis elegans Hypothetical
protein T12G3.7b protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.7
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +2
Query: 461 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKIND--QITITPH----IPARTNST 622
D RP +K G+ S E + P L ++ +TI P IP TN+T
Sbjct: 33 DDVRPPIDENENEKEGK------SSEKSTTPPTLTLLSSTANLTIAPDQVAPIPVATNAT 86
Query: 623 AIESALKQQNQPLDKKRKLDSNKSGAPKKK 712
IES K +N +KK +L + K P K
Sbjct: 87 IIES--KTEN---EKKEELLTGKEETPPAK 111
>Z68752-10|CAA92986.1| 354|Caenorhabditis elegans Hypothetical
protein T12G3.7a protein.
Length = 354
Score = 27.9 bits (59), Expect = 9.7
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +2
Query: 461 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKIND--QITITPH----IPARTNST 622
D RP +K G+ S E + P L ++ +TI P IP TN+T
Sbjct: 63 DDVRPPIDENENEKEGK------SSEKSTTPPTLTLLSSTANLTIAPDQVAPIPVATNAT 116
Query: 623 AIESALKQQNQPLDKKRKLDSNKSGAPKKK 712
IES K +N +KK +L + K P K
Sbjct: 117 IIES--KTEN---EKKEELLTGKEETPPAK 141
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 602 PARTNSTAIE-SALKQQNQPLDKKRKL 679
P +T+S++ SA KQ+N P+D+K KL
Sbjct: 450 PRKTSSSSTTTSAKKQKNPPIDEKEKL 476
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 602 PARTNSTAIE-SALKQQNQPLDKKRKL 679
P +T+S++ SA KQ+N P+D+K KL
Sbjct: 518 PRKTSSSSTTTSAKKQKNPPIDEKEKL 544
>AL023840-2|CAM82781.1| 324|Caenorhabditis elegans Hypothetical
protein T12G3.7b protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.7
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +2
Query: 461 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKIND--QITITPH----IPARTNST 622
D RP +K G+ S E + P L ++ +TI P IP TN+T
Sbjct: 33 DDVRPPIDENENEKEGK------SSEKSTTPPTLTLLSSTANLTIAPDQVAPIPVATNAT 86
Query: 623 AIESALKQQNQPLDKKRKLDSNKSGAPKKK 712
IES K +N +KK +L + K P K
Sbjct: 87 IIES--KTEN---EKKEELLTGKEETPPAK 111
>AL023840-1|CAA19510.1| 354|Caenorhabditis elegans Hypothetical
protein T12G3.7a protein.
Length = 354
Score = 27.9 bits (59), Expect = 9.7
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +2
Query: 461 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKIND--QITITPH----IPARTNST 622
D RP +K G+ S E + P L ++ +TI P IP TN+T
Sbjct: 63 DDVRPPIDENENEKEGK------SSEKSTTPPTLTLLSSTANLTIAPDQVAPIPVATNAT 116
Query: 623 AIESALKQQNQPLDKKRKLDSNKSGAPKKK 712
IES K +N +KK +L + K P K
Sbjct: 117 IIES--KTEN---EKKEELLTGKEETPPAK 141
>AF016438-12|AAK84532.1| 407|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 134 protein.
Length = 407
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 172 RNSVTCKKLFGRKCGQNVCRCQSNGAF 252
R + TC ++FGR C C+ NG F
Sbjct: 36 RRAATCSRIFGR-CPNGNCKLLENGKF 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,389,544
Number of Sequences: 27780
Number of extensions: 380877
Number of successful extensions: 1400
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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