Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_N09
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.7  
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595...    30   2.9  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   5.1  
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768...    29   5.1  
09_03_0145 - 12749288-12751510                                         28   9.0  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 589 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 747
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>10_02_0157 -
           5954439-5954801,5956244-5956270,5956465-5956526,
           5956971-5957592
          Length = 357

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = +3

Query: 696 PPGSSLVRSPVPTLPXTGYRNTCPPFPPSGKRGAFSXPTL 815
           PP  ++V  P+PT P        PP PP     A   P L
Sbjct: 40  PPAPTVVAPPLPTTPPPAVVAPSPPLPPLTPPPAIVPPAL 79


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 22/71 (30%), Positives = 24/71 (33%)
 Frame = -1

Query: 877 GXLHPAQLGGXXPXPGIGKTYXVGNEKAPRFPEGGKGGQVFRYPVXGRVGTGERTRELPG 698
           G   P   GG    P +      G    P  P GG GG   R  + G  G G   R   G
Sbjct: 104 GGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGG 163

Query: 697 GNAWYLYSPVG 665
           G    L  P G
Sbjct: 164 GRGGALGRPPG 174


>01_01_0975 -
           7686297-7686458,7687117-7687245,7687754-7687831,
           7688011-7688469,7690648-7690788,7691771-7692421
          Length = 539

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = +3

Query: 696 PPGSSLVRSPVP----TLPXTGYRNTCPPFPPSGKR 791
           PP + L R PVP     +P   YR   PP PP G +
Sbjct: 439 PPAAMLQRFPVPPVPGMVPHPMYRPIPPPSPPQGNK 474


>09_03_0145 - 12749288-12751510
          Length = 740

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +3

Query: 696 PPGSSLVRSPVPTLPXTGYRNTCPPFPPSGKRGAFSXPTLXVFP 827
           PP    ++ P P LP   +    PPFP  G R AF      V P
Sbjct: 33  PPPPPGIQPPPPALPGMPHGRPPPPFP--GGRDAFPQAASTVVP 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,868,158
Number of Sequences: 37544
Number of extensions: 395582
Number of successful extensions: 1136
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)