Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_N04
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 164 8e-41
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 164 8e-41
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 141 5e-34
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 141 5e-34
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 93 2e-19
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 83 3e-16
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 83 3e-16
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 69 4e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 69 6e-12
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 69 6e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 68 7e-12
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 64 2e-10
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 64 2e-10
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 64 2e-10
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 64 2e-10
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 64 2e-10
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 63 2e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 61 9e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 61 9e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 61 9e-10
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 59 5e-09
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 58 1e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 55 7e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 53 2e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 52 5e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 49 4e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 49 4e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 49 4e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 49 5e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 49 5e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 46 3e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 46 3e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 46 3e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 45 6e-05
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 41 0.001
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 41 0.001
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 38 0.009
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.11
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.20
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.45
Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical pr... 31 0.79
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.79
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 2.4
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 29 5.5
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 5.5
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 5.5
Z48543-2|CAA88433.2| 478|Caenorhabditis elegans Hypothetical pr... 28 9.7
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 9.7
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 9.7
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 164 bits (398), Expect = 8e-41
Identities = 77/101 (76%), Positives = 89/101 (88%)
Frame = +3
Query: 528 KXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 707
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 708 NAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITRR 830
N +CHACIGGTN+ EDIR+ + G HVV GTPGRV+DMI RR
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 162
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 413 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTR 538
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ P I R
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV-PAILKAR 64
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 164 bits (398), Expect = 8e-41
Identities = 77/101 (76%), Positives = 89/101 (88%)
Frame = +3
Query: 528 KXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 707
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 708 NAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITRR 830
N +CHACIGGTN+ EDIR+ + G HVV GTPGRV+DMI RR
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 162
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 413 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTR 538
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI P I R
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI-PAILKAR 64
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 141 bits (342), Expect = 5e-34
Identities = 69/98 (70%), Positives = 82/98 (83%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 713
+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 714 KCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITR 827
CIGGT+VR+D R+ E+G+HVVVGTPGRV DMI R
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINR 164
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = +2
Query: 386 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 532
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 141 bits (342), Expect = 5e-34
Identities = 69/98 (70%), Positives = 82/98 (83%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 713
+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 714 KCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITR 827
CIGGT+VR+D R+ E+G+HVVVGTPGRV DMI R
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINR 164
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = +2
Query: 386 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 532
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 93.1 bits (221), Expect = 2e-19
Identities = 37/103 (35%), Positives = 69/103 (66%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 698
+A +D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L
Sbjct: 76 VALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELS 135
Query: 699 DHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITR 827
H+ K GGT++R+DI + VH+V+ TPGR+ D++ +
Sbjct: 136 KHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEK 178
Score = 34.7 bits (76), Expect = 0.084
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 425 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 532
F+D L +LL GI+ G+EKPS IQ+ +I + G
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG 80
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/95 (44%), Positives = 57/95 (60%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 716
D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG + K
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 717 CHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI 821
C +GG ++ R+ HVVV TPGR+ D+I
Sbjct: 188 CSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/95 (44%), Positives = 57/95 (60%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 716
D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG + K
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLK 187
Query: 717 CHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI 821
C +GG ++ R+ HVVV TPGR+ D+I
Sbjct: 188 CSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 72.5 bits (170), Expect = 3e-13
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 713
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 714 KCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITR 827
K H I G N+ +R + +V+GTPG D + +
Sbjct: 310 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQK 346
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 72.5 bits (170), Expect = 3e-13
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 713
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 714 KCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITR 827
K H I G N+ +R + +V+GTPG D + +
Sbjct: 335 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQK 371
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 72.5 bits (170), Expect = 3e-13
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 713
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 714 KCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITR 827
K H I G N+ +R + +V+GTPG D + +
Sbjct: 719 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQK 755
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 68.9 bits (161), Expect = 4e-12
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKV 683
+A RD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V
Sbjct: 162 IAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEV 221
Query: 684 VIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI 821
I L K GG + R E GV +VV TPGR+ D +
Sbjct: 222 SIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFL 267
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 68.9 bits (161), Expect = 4e-12
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQIQKV 683
RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEE 397
Query: 684 VIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITRR 830
G L K + IGG + + + GV VV+ TPGR+ D++ R
Sbjct: 398 TNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENR 446
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 68.5 bits (160), Expect = 6e-12
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLN 710
+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTG 121
Query: 711 AKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI 821
+C +GG + E +++ TPGR+ +I
Sbjct: 122 LRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVI 158
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 68.5 bits (160), Expect = 6e-12
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLN 710
+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTG 121
Query: 711 AKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI 821
+C +GG + E +++ TPGR+ +I
Sbjct: 122 LRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVI 158
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 68.1 bits (159), Expect = 7e-12
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQA---LILAPTRELAQQI 674
+A RD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 223 VALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Query: 675 QKVVIALGDHLNA------KCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITRR 830
++I + D L + CIGG + E + G+H+VV TPGR+ DM+T++
Sbjct: 283 FDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKK 340
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +3
Query: 522 ASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 701
A + +DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG
Sbjct: 78 ALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGS 137
Query: 702 HLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI-TRRGF 836
+ +GG ++ H++V TPGR+ D + +GF
Sbjct: 138 GIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGF 183
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 395 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 532
D + D ++F ++ + + L G+ KPS IQQ A+ +QG
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQG 81
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 713
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 80 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGV 139
Query: 714 KCHACIGGTNVRED-IRQPESGVHVVVGTPGRV 809
K GG +++D R H+VVGTPGR+
Sbjct: 140 KVAVFFGGMAIKKDEERLANDCPHIVVGTPGRM 172
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 713
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 80 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGV 139
Query: 714 KCHACIGGTNVRED-IRQPESGVHVVVGTPGRV 809
K GG +++D R H+VVGTPGR+
Sbjct: 140 KVAVFFGGMAIKKDEERLANDCPHIVVGTPGRM 172
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 713
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 79 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGV 138
Query: 714 KCHACIGGTNVRED-IRQPESGVHVVVGTPGRV 809
K GG +++D R H+VVGTPGR+
Sbjct: 139 KVAVFFGGMAIKKDEERLANDCPHIVVGTPGRM 171
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 63.7 bits (148), Expect = 2e-10
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 713
RD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A
Sbjct: 60 RDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGA 118
Query: 714 KCHACIGGTNVRED-IRQPESGVHVVVGTPGRVYDMI 821
+ +GG+ + + I ++ +V+GTPGR+ ++
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLV 155
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 63.7 bits (148), Expect = 2e-10
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 713
RD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A
Sbjct: 60 RDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGA 118
Query: 714 KCHACIGGTNVRED-IRQPESGVHVVVGTPGRVYDMI 821
+ +GG+ + + I ++ +V+GTPGR+ ++
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLV 155
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 63.3 bits (147), Expect = 2e-10
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVI 689
+A +D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V
Sbjct: 181 VALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFR 240
Query: 690 ALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYD 815
L + + C GG +++ SG VVV TPGR+ D
Sbjct: 241 KLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLID 282
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 320 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 493
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 494 AIQQRAIMPCIQG 532
IQQ I + G
Sbjct: 173 PIQQACIPVALTG 185
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 62.1 bits (144), Expect = 5e-10
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALG 698
RDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFA 401
Query: 699 DHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI 821
L K GG + E I + G +VV TPGR+ D++
Sbjct: 402 KPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVL 442
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 61.3 bits (142), Expect = 9e-10
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 16/121 (13%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 668
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 669 QIQKVVIALGDHLNAKCHACIGGT-NVREDIRQPESGVHVVVGTPGRVYDMITRRGFPXI 845
QI K N + GG N R+ + + +G H+++ TPGR+ D+I +GF +
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII-EQGFIGL 295
Query: 846 A 848
A
Sbjct: 296 A 296
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 61.3 bits (142), Expect = 9e-10
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 16/121 (13%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 668
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 669 QIQKVVIALGDHLNAKCHACIGGT-NVREDIRQPESGVHVVVGTPGRVYDMITRRGFPXI 845
QI K N + GG N R+ + + +G H+++ TPGR+ D+I +GF +
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII-EQGFIGL 279
Query: 846 A 848
A
Sbjct: 280 A 280
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 61.3 bits (142), Expect = 9e-10
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 16/121 (13%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 668
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 669 QIQKVVIALGDHLNAKCHACIGGT-NVREDIRQPESGVHVVVGTPGRVYDMITRRGFPXI 845
QI K N + GG N R+ + + +G H+++ TPGR+ D+I +GF +
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII-EQGFIGL 276
Query: 846 A 848
A
Sbjct: 277 A 277
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 60.9 bits (141), Expect = 1e-09
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 707
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 708 NAKCHACIGGTNVREDIRQ-PESGVHVVVGTPGRVYDMI 821
N GG V ++I+ V+++V TPGR++ +I
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQII 146
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 58.8 bits (136), Expect = 5e-09
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIALGDH 704
DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A+G H
Sbjct: 115 DVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAH 174
Query: 705 LNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
C IGG++V + R SG++++V TPGR+
Sbjct: 175 HGFSCGLVIGGSDVAFE-RNRISGINIIVCTPGRL 208
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/103 (35%), Positives = 54/103 (52%)
Frame = +3
Query: 492 LQSSNAQ*CLASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 671
+Q S C K DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+
Sbjct: 22 IQKSAVAPCTTGK--DVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQR 79
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTP 800
+ + +LG +LN C+G E+ + HV++GTP
Sbjct: 80 AHEQLKSLGRNLNVNA-TCLGFDTTAEN----DKISHVLMGTP 117
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 434 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 532
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG 33
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 54.8 bits (126), Expect = 7e-08
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +3
Query: 543 IAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA--- 713
+A AQ+ G +S + ID+S C +IL PTREL QQ + + L++
Sbjct: 256 VAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVLDSPKI 313
Query: 714 KCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI 821
+C G N+ + +R E+G +VVGTP RV+D+I
Sbjct: 314 RCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLI 349
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 54.0 bits (124), Expect = 1e-07
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQIQK 680
+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQQI+
Sbjct: 122 QDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEG 181
Query: 681 VVIALGDHLNAKCHACI-GGTNVREDIRQPESGVHVVVGTPGRVYDM 818
V N C+ GG + E + GV +V+ TPGR+ D+
Sbjct: 182 EVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDL 226
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGD 701
+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+ L +
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLE 165
Query: 702 HLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYD 815
N +GG+N + + GV ++V TPGR+ D
Sbjct: 166 GSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLD 203
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 680
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 681 VVIALGDHLNAKCHACIGG-TNVREDIRQPESGVHVVVGTPGRVYDMI 821
+ AL + +GG V+++ + +VV TPGR++ M+
Sbjct: 87 HINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMM 134
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 680
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 681 VVIALGDHLNAKCHACIGG-TNVREDIRQPESGVHVVVGTPGRVYDMI 821
+ AL + +GG V+++ + +VV TPGR++ M+
Sbjct: 254 HINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMM 301
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 52.0 bits (119), Expect = 5e-07
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQ 677
LA + ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI
Sbjct: 122 LALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIY 180
Query: 678 KVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITRR 830
K+ + L L + N E+ E HVVV TPG++ M + R
Sbjct: 181 KLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLR 231
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 383 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 514
P + D++ +TF D L E +L+ I G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVV 686
DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI + +
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
Query: 687 IALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMITR 827
+ + G ++ + + +G +++GT GR+ D +
Sbjct: 480 RTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMDFTVK 526
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 49.2 bits (112), Expect = 4e-06
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 671
L + D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
I + GG V + Q E G ++VGT GR+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 49.2 bits (112), Expect = 4e-06
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 671
L + D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
I + GG V + Q E G ++VGT GR+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 49.2 bits (112), Expect = 4e-06
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 671
L + D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
I + GG V + Q E G ++VGT GR+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 48.8 bits (111), Expect = 5e-06
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 671
L + +D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
I + GG NV + Q G ++VGT GRV
Sbjct: 391 IYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 48.8 bits (111), Expect = 5e-06
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 671
L + +D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
I + GG NV + Q G ++VGT GRV
Sbjct: 391 IYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 48.4 bits (110), Expect = 6e-06
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Frame = +3
Query: 522 ASKXRDVIAQAQSGTGKTATFS----ISILQQIDTSIRECQ-ALILAPTRELAQQI--QK 680
A RDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+ +
Sbjct: 299 ALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEA 358
Query: 681 VVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVYDMI 821
++N C A GG+ + G +VV TPGR+ D++
Sbjct: 359 KKFCKVYNINPIC-AYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLV 404
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 671
L + D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
I + GG V + Q E G ++VGT GR+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 671
L + D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
I + GG V + Q E G ++VGT GR+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +3
Query: 519 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 671
L + D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 672 IQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRV 809
I + GG V + Q E G ++VGT GR+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 45.2 bits (102), Expect = 6e-05
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 17/113 (15%)
Frame = +3
Query: 534 RDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAPTRELA 665
RD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
Query: 666 QQIQKVVIALGDHLNAKCHACIGGT-NVREDIRQPESGVHVVVGTPGRVYDMI 821
QI GG N ++ I + G H+++ TPGR+ D++
Sbjct: 264 LQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVM 316
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 42.3 bits (95), Expect = 4e-04
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +3
Query: 528 KXRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIALGDH 704
+ RDV A +G+GKT + + +L + + + QA+IL P + L QI D
Sbjct: 155 RPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDE 214
Query: 705 LN-AKCHACIGGTNVREDIRQPESG-VHVVVGTPGRVYDMITRRGFPXI 845
AK + G + ++ RQ S +V+V TP R+ +T + P I
Sbjct: 215 SGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPI 263
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQKVV 686
DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTA 834
Query: 687 IALGDHLNAKCHACIGGTNVREDIR--QPESGVHVVVGTPGRVYDMI 821
L KC GG + +++ + S ++++V T GR+ D +
Sbjct: 835 RQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFV 881
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQKVV 686
DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTA 834
Query: 687 IALGDHLNAKCHACIGGTNVREDIR--QPESGVHVVVGTPGRVYDMI 821
L KC GG + +++ + S ++++V T GR+ D +
Sbjct: 835 RQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFV 881
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3
Query: 633 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQPESGVHVVVGTPGRVY 812
A+I+APT+EL QI K+ + L L + N E+ E HVVV TPG++
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLL 158
Query: 813 DMITRR 830
M + R
Sbjct: 159 RMCSLR 164
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Frame = +3
Query: 525 SKXRDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 671
++ R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 161 TERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 789 PPHEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 697
P HEHH G++ HG H H HG HS H
Sbjct: 635 PHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 837 GSHDELSYHIHDLECPPPHEHHSPVGEYLHGHWCHQCKHGI*HSSDHQ 694
GSH ++H H E HH+P HGH H HG+ H H+
Sbjct: 553 GSHHSPAHHGHHGE-----HHHAPAH---HGHHGHHGSHGV-HHGHHE 591
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 540 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 719
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 720 HA-CIGGTNVREDI 758
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical
protein F11A5.9 protein.
Length = 537
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 712 LNAMLALVAPMSVKIFANRRVVFMWWWALQVVYM 813
LN + AL+AP+ V IF WWW V ++
Sbjct: 448 LNCLAALLAPVIVNIFVANDTWDEWWWVWMVHFV 481
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 380 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 282
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 537 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 674
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 479 FEKPSAIQQRAIMPCIQGTRCYRSSPV 559
F + AI++ A+ PC G CYR +P+
Sbjct: 2 FFRRQAIRKCALRPCSGGEACYRDTPL 28
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 540 VIAQAQSGTGKTATFSISILQQIDTSIREC 629
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 350 DPSMAHFWNPLANLLTFFQTNKT 282
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>Z48543-2|CAA88433.2| 478|Caenorhabditis elegans Hypothetical
protein C18D1.2 protein.
Length = 478
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 712 LNAMLALVAPMSVKIFANRRVVFMWWWALQVVYMI 816
LN + AL+AP+ V IF W+W ++I
Sbjct: 402 LNCLAALLAPVIVNIFVENDTWNEWYWVWMSHFVI 436
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 293 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 433
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 558 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 737
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K A
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTKWAAL--- 1089
Query: 738 TNVREDIRQPESGVHV 785
I Q +S +HV
Sbjct: 1090 --QARSIEQQQSPMHV 1103
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 558 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 737
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K A
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTKWAAL--- 1089
Query: 738 TNVREDIRQPESGVHV 785
I Q +S +HV
Sbjct: 1090 --QARSIEQQQSPMHV 1103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,687,280
Number of Sequences: 27780
Number of extensions: 412757
Number of successful extensions: 1267
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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