Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_N03
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 145 2e-34
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 145 2e-34
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 145 2e-34
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 145 2e-34
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 145 2e-34
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 145 2e-34
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 145 2e-34
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 145 2e-34
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 89 2e-17
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 145 bits (352), Expect = 2e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 382
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 383 GVIVNNKGEMKGSAITG 433
GVIVNNKGEMKGSAITG
Sbjct: 103 GVIVNNKGEMKGSAITG 119
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 76 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
Score = 35.1 bits (77), Expect = 0.35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 432 GPVAKECADLWPR 470
GPVAKECADLWPR
Sbjct: 119 GPVAKECADLWPR 131
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 145 bits (351), Expect = 2e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 382
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 383 GVIVNNKGEMKGSAITG 433
GVIVNNKGEMKGSAITG
Sbjct: 103 GVIVNNKGEMKGSAITG 119
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 76 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
Score = 35.1 bits (77), Expect = 0.35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 432 GPVAKECADLWPR 470
GPVAKECADLWPR
Sbjct: 119 GPVAKECADLWPR 131
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 145 bits (351), Expect = 2e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 382
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 383 GVIVNNKGEMKGSAITG 433
GVIVNNKGEMKGSAITG
Sbjct: 103 GVIVNNKGEMKGSAITG 119
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 76 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
Score = 35.1 bits (77), Expect = 0.35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 432 GPVAKECADLWPR 470
GPVAKECADLWPR
Sbjct: 119 GPVAKECADLWPR 131
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 145 bits (351), Expect = 2e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 382
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 383 GVIVNNKGEMKGSAITG 433
GVIVNNKGEMKGSAITG
Sbjct: 103 GVIVNNKGEMKGSAITG 119
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 76 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
Score = 35.1 bits (77), Expect = 0.35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 432 GPVAKECADLWPR 470
GPVAKECADLWPR
Sbjct: 119 GPVAKECADLWPR 131
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 145 bits (351), Expect = 2e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 382
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 383 GVIVNNKGEMKGSAITG 433
GVIVNNKGEMKGSAITG
Sbjct: 103 GVIVNNKGEMKGSAITG 119
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 76 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
Score = 35.1 bits (77), Expect = 0.35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 432 GPVAKECADLWPR 470
GPVAKECADLWPR
Sbjct: 119 GPVAKECADLWPR 131
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 145 bits (351), Expect = 2e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 382
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 383 GVIVNNKGEMKGSAITG 433
GVIVNNKGEMKGSAITG
Sbjct: 103 GVIVNNKGEMKGSAITG 119
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 76 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
Score = 35.1 bits (77), Expect = 0.35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 432 GPVAKECADLWPR 470
GPVAKECADLWPR
Sbjct: 119 GPVAKECADLWPR 131
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 145 bits (351), Expect = 2e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 382
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 37 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 96
Query: 383 GVIVNNKGEMKGSAITG 433
GVIVNNKGEMKGSAITG
Sbjct: 97 GVIVNNKGEMKGSAITG 113
Score = 77.0 bits (181), Expect = 9e-14
Identities = 34/38 (89%), Positives = 38/38 (100%)
Frame = +1
Query: 94 GGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
GGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 38
Score = 35.1 bits (77), Expect = 0.35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 432 GPVAKECADLWPR 470
GPVAKECADLWPR
Sbjct: 113 GPVAKECADLWPR 125
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 145 bits (351), Expect = 2e-34
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 382
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 383 GVIVNNKGEMKGSAITG 433
GVIVNNKGEMKGSAITG
Sbjct: 103 GVIVNNKGEMKGSAITG 119
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 76 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
Score = 35.1 bits (77), Expect = 0.35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 432 GPVAKECADLWPR 470
GPVAKECADLWPR
Sbjct: 119 GPVAKECADLWPR 131
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/44 (90%), Positives = 44/44 (100%)
Frame = +1
Query: 76 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQG 207
MSKRGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKG 44
Score = 64.1 bits (149), Expect = 7e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2
Query: 203 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 301
K IKGRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKK 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,979,822
Number of Sequences: 237096
Number of extensions: 2379589
Number of successful extensions: 5608
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5608
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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