Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M24
(933 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 35 0.11
01_03_0005 + 11568545-11569119,11569179-11569191 34 0.14
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.25
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.43
07_03_1136 + 24218601-24218734,24218769-24219906 31 0.99
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 31 1.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.0
05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621 29 4.0
02_01_0302 - 2021221-2023305 29 7.0
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 7.0
01_01_0083 + 631196-631675 29 7.0
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 28 9.2
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 9.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 9.2
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 9.2
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = +2
Query: 446 KXPPPPGXXGXXFWXPXPXPPXKTPXPXXXG--GGXXXXPPXGGXXXXPXXGGXP 604
K PPPP P P P P P G GG PP GG P G P
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396
Score = 31.9 bits (69), Expect = 0.75
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGGXXXXPXXXGXXP 606
PPPP P P PP K P G PP G P G P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPP P P PP P P PP G P G P P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPP---------PPKGPPPPPPAKGPPPPPPPKGPSP 364
Query: 632 PKXPKP 649
P P P
Sbjct: 365 PPPPPP 370
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 34.3 bits (75), Expect = 0.14
Identities = 26/80 (32%), Positives = 29/80 (36%)
Frame = -1
Query: 648 GXGXXGGXXXKXFFXGXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPX 469
G G GG + PP G GG PP G GG G G Q+
Sbjct: 78 GGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGG----GGGGGGGWQQGG-- 131
Query: 468 XPGGGGXFXXXKXXPPPPXP 409
GGGG + PPPP P
Sbjct: 132 --GGGGAY----PTPPPPNP 145
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.5 bits (73), Expect = 0.25
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGG 570
PPPP G +G P PP P G G PP GG
Sbjct: 1184 PPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 454 PPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPP 561
PPP G FL P P PP P P G PP
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPP 77
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 0.99
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -2
Query: 569 PPWGGXXPXPPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
PP GG P P G GG G GP P GGGG
Sbjct: 91 PPGGGGAPGPL-GGGGARPPGGGGGGGPPSLPPGAGGGGG 129
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -1
Query: 603 GXP-PXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGG 451
G P P G PP GG PP G G GG G P PGGGG
Sbjct: 96 GAPGPLGGGGARPPGGGGGGGPPSLPPGAG---GGGG-----ARPPAPGGGG 139
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -2
Query: 584 GKXXXPPWGGXXPXPPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
G PP GG PP G G GG G P P P GGGG
Sbjct: 103 GGGARPPGGGGGGGPPSLPPGAG---GGGGARP----PAPGGGGG 140
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = -1
Query: 594 PXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGGXFXXXK--XXPP 421
P G PP G P GV+ G P PG G F + PP
Sbjct: 45 PQSGPYPYPPPSGAVYPPQGYPSSHGVYPPPQGPYPPPHQPPPPGYQGYFNQGQQPYYPP 104
Query: 420 PPXP 409
PP P
Sbjct: 105 PPLP 108
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPP + P P PP P P PP P P P
Sbjct: 550 PPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPP-------PPPPPPPLPNCLVPSP 602
Query: 632 PKXPKP 649
P P P
Sbjct: 603 PPPPPP 608
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPP 561
PPPP G F P P PP P P PP
Sbjct: 551 PPPPSGNKPAF-SPPPPPPPPPPPPLPQSNYASSQPP 586
>05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621
Length = 283
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 570 PPXGGXKXXPPPXXXGXGVFXGGXG 496
PP G + PPP G GV GG G
Sbjct: 53 PPDDGGEFPPPPDDGGEGVSEGGAG 77
>02_01_0302 - 2021221-2023305
Length = 694
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXG 567
PP P GP P PP +P P + P G
Sbjct: 400 PPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSSYPAPPG 438
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 5/54 (9%)
Frame = -2
Query: 596 PXFXGKXXXPPWGGXXPX-----PPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
P + PP+ G P PP G G G GP P GGGG
Sbjct: 352 PSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGGG 405
>01_01_0083 + 631196-631675
Length = 159
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Frame = -1
Query: 594 PXXGXXXXPPXGGXKXXPPPXXXGXGVFX--GGXGXGXQKXXPXXPGGGGXFXXXKXXPP 421
P G PP PP GG G P GGGG PP
Sbjct: 51 PSSGYSYPPPSSSSSNTPPSSSSYWNYPPPQGGGGGYIPYYQPPAGGGGGGGGFNYPAPP 110
Query: 420 PPXP 409
PP P
Sbjct: 111 PPNP 114
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +1
Query: 454 PPPXGXGXXFLGPXP---XPPXKNPXPXXXGG-GXGFXPPXGGXXXXPXXXGXXP 606
PPP G F GP P PP P G+ P GG P P
Sbjct: 411 PPPSGPAPPFYGPNPGMYEPPAVRPNSGPPPSYNTGYKPQGGGGFPEPYGYSGSP 465
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -1
Query: 642 GXXGGXXXKXFFXGXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXP 463
G GG G P G P GG G G GG G G +
Sbjct: 34 GAGGGGVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGGGGGGYESGGGRGY 93
Query: 462 GGGG 451
GGGG
Sbjct: 94 GGGG 97
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +1
Query: 451 PPPPX---GXGXXFLGPXPXPPXKNP-XPXXXGGGXGFXPPXG 567
PPPP GP P PP P P G G G PP G
Sbjct: 333 PPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPG 375
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 490 PXPXPPXKNPXPXXXGGGXG 549
P P PP ++P P GGG G
Sbjct: 9 PPPPPPPQHPPPPQAGGGGG 28
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.152 0.535
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,803,380
Number of Sequences: 37544
Number of extensions: 388061
Number of successful extensions: 1144
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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