Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M24
(933 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.072
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.072
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.072
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.096
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.096
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.13
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.67
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.67
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 32 0.67
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 32 0.67
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.89
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 0.89
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.1
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 29 4.8
Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical p... 29 6.3
Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical p... 29 6.3
Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical p... 29 6.3
Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical p... 29 6.3
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 6.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.3
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.3
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 6.3
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.072
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPPG P P PP P GG PP GG P GG P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGG--LPPISGGPPPPPPPPGGC 768
Query: 632 PKXPKP 649
P P P
Sbjct: 769 PPPPPP 774
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGGXXXXP 585
PPPP G G P PP P GG PP GG P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPPG P P PP P GG PP G P P F P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPI--SGGPPPPPPPPGGCPPPPP--PPPPGGFKGGP 784
Query: 632 PKXPKP 649
P P P
Sbjct: 785 PPPPPP 790
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGG 570
PPPP G GP P PP P GG PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG 750
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -1
Query: 603 GXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGGXFXXXKXXP 424
G PP PP G PPP G G K P P G F
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 800
Query: 423 PPPXPXKK 400
P P KK
Sbjct: 801 PDYLPPKK 808
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.072
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPPG P P PP P GG PP GG P GG P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGG--LPPISGGPPPPPPPPGGC 768
Query: 632 PKXPKP 649
P P P
Sbjct: 769 PPPPPP 774
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGGXXXXP 585
PPPP G G P PP P GG PP GG P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPPG P P PP P GG PP G P P F P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPI--SGGPPPPPPPPGGCPPPPP--PPPPGGFKGGP 784
Query: 632 PKXPKP 649
P P P
Sbjct: 785 PPPPPP 790
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGG 570
PPPP G GP P PP P GG PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG 750
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -1
Query: 603 GXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGGXFXXXKXXP 424
G PP PP G PPP G G K P P G F
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 800
Query: 423 PPPXPXKK 400
P P KK
Sbjct: 801 PDYLPPKK 808
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.072
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPPG P P PP P GG PP GG P GG P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGG--LPPISGGPPPPPPPPGGC 351
Query: 632 PKXPKP 649
P P P
Sbjct: 352 PPPPPP 357
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGGXXXXP 585
PPPP G G P PP P GG PP GG P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPPG P P PP P GG PP G P P F P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPI--SGGPPPPPPPPGGCPPPPP--PPPPGGFKGGP 367
Query: 632 PKXPKP 649
P P P
Sbjct: 368 PPPPPP 373
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGG 570
PPPP G GP P PP P GG PP GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGG 333
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -1
Query: 603 GXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGGXFXXXKXXP 424
G PP PP G PPP G G K P P G F
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 383
Query: 423 PPPXPXKK 400
P P KK
Sbjct: 384 PDYLPPKK 391
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.096
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXP-PXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXP 604
PPPP G W P P P P +TP P G PP P GG P
Sbjct: 287 PPPPPSSG--MWPPPPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMP 334
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.096
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXP-PXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXP 604
PPPP G W P P P P +TP P G PP P GG P
Sbjct: 297 PPPPPSSG--MWPPPPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMP 344
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPP P PP P G PP G P G P + P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 632 PKXPK 646
P P+
Sbjct: 300 PPPPR 304
Score = 31.9 bits (69), Expect = 0.67
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPP G PP +T P G PP GG P G P P
Sbjct: 255 PPPPPAAGSP-------PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Query: 632 P--KXPKPQ 652
P P PQ
Sbjct: 308 PTGSLPPPQ 316
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 491 PXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXPP 634
P P PP K P G G PP G P G P PP
Sbjct: 237 PPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Frame = -1
Query: 597 PPXXGXXXXPPXGGXKXXPPPXXXGXGV--FXGGXGXGXQKXXPXXPGGGGXFXXXKXXP 424
PP PP G PPP G G P P GG P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 423 PPPXPXK 403
PPP P +
Sbjct: 298 PPPPPPR 304
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPP P PP P G PP G P G P + P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 632 PKXPK 646
P P+
Sbjct: 321 PPPPR 325
Score = 31.9 bits (69), Expect = 0.67
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPP G PP +T P G PP GG P G P P
Sbjct: 276 PPPPPAAGSP-------PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Query: 632 P--KXPKPQ 652
P P PQ
Sbjct: 329 PTGSLPPPQ 337
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 491 PXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXPP 634
P P PP K P G G PP G P G P PP
Sbjct: 258 PPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Frame = -1
Query: 597 PPXXGXXXXPPXGGXKXXPPPXXXGXGV--FXGGXGXGXQKXXPXXPGGGGXFXXXKXXP 424
PP PP G PPP G G P P GG P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 423 PPPXPXK 403
PPP P +
Sbjct: 319 PPPPPPR 325
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPP P PP P G PP G P G P + P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 632 PKXPK 646
P P+
Sbjct: 306 PPPPR 310
Score = 31.9 bits (69), Expect = 0.67
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXP 631
PPPP G PP +T P G PP GG P G P P
Sbjct: 261 PPPPPAAGSP-------PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Query: 632 P--KXPKPQ 652
P P PQ
Sbjct: 314 PTGSLPPPQ 322
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 491 PXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXFXXXPP 634
P P PP K P G G PP G P G P PP
Sbjct: 243 PPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Frame = -1
Query: 597 PPXXGXXXXPPXGGXKXXPPPXXXGXGV--FXGGXGXGXQKXXPXXPGGGGXFXXXKXXP 424
PP PP G PPP G G P P GG P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 423 PPPXPXK 403
PPP P +
Sbjct: 304 PPPPPPR 310
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNP---XPXXXGGGXGFXPPXGG 570
PPPP G G L P P + P P GGG G P GG
Sbjct: 34 PPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGG--XXXXPXXGGXPXKKXFXX 625
PP F+ P P P P P GG P G P GG P
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFG 112
Query: 626 XPPKXPKP 649
PP P P
Sbjct: 113 APPPPPPP 120
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 597 PPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGG 451
PP PP GG PPP GG G P PG GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPX-PXPPXKNPXPXXXGGGXGFXPP 561
P PP G GP P PP P P GGG G PP
Sbjct: 780 PMPPRG------GPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 455 PPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXP 604
PPP P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 597 PPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGG 451
PP PP GG PPP GG G P PG GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPX-PXPPXKNPXPXXXGGGXGFXPP 561
P PP G GP P PP P P GGG G PP
Sbjct: 780 PMPPRG------GPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 455 PPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXP 604
PPP P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 466 GXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGG 570
G G + PP P P GGG G+ P GG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 466 GXGXXFLGPXPXPPXKNPXPXXXGGGXGFXPPXGG 570
G G + PP P P GGG G+ P GG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPX-PXPPXKNPXPXXXGGGXGFXPP 561
P PP G GP P PP P P GGG G PP
Sbjct: 780 PMPPRG------GPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 455 PPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXP 604
PPP P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 525 GXGVFXGGXGXGXQKXXPXXPGGGGXFXXXKXXPPPPXP 409
G G GG G G GGG + PPPP P
Sbjct: 269 GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 560 GGXXPXPPPXXXGXGFXXGGXGXGPK-XXXPXPXGGG 453
GG P P P G G GG G G P P GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 507 GGXGXGXQKXXPXXPGGGGXFXXXKXXPPPPXP 409
GG G G GGGG PPPP P
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 491 PXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGG 598
P P PP P P GGG GG GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 525 GXGVFXGGXGXGXQKXXPXXPGGGGXFXXXKXXPPPPXP 409
G G GG G G GGG + PPPP P
Sbjct: 269 GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 560 GGXXPXPPPXXXGXGFXXGGXGXGPK-XXXPXPXGGG 453
GG P P P G G GG G G P P GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 507 GGXGXGXQKXXPXXPGGGGXFXXXKXXPPPPXP 409
GG G G GGGG PPPP P
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 491 PXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGG 598
P P PP P P GGG GG GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPX-PXPPXKNPXPXXXGGGXGFXPP 561
P PP G GP P PP P P GGG G PP
Sbjct: 780 PMPPRG------GPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 455 PPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXP 604
PPP P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 603 GXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXG 490
G PP G PP G PPP G G G G G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = -1
Query: 603 GXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGG 451
G PP G PP G + PP G G G G P PGG G
Sbjct: 172 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPG----GPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 603 GXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXG 490
G PP G PP G PPP G G G G G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = -1
Query: 603 GXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGG 451
G PP G PP G + PP G G G G P PGG G
Sbjct: 452 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPG----GPGGPGGPG 498
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 560 GGXXPXPPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
GG P PPP G G GG G G G GG
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG 143
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 560 GGXXPXPPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
GG P PPP G G GG G G GGGG
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCG---GGGGGCGGGG 83
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = -1
Query: 648 GXGXXGGXXXKXFFXGXPPXXGXXXXPPXGGXKXXPPPXXXGXGVFXGGXGXGXQKXXPX 469
G G GG PP GG G G GG G G
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 98
Query: 468 XPGGGGXFXXXKXXPPPP 415
GGGG PPPP
Sbjct: 99 CGGGGGCGGGCAPPPPPP 116
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 566 PWGGXXPXPPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
P P PPP G G G P P P G GG
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGG 540
PPPP G +G PP P P GG
Sbjct: 633 PPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 566 PWGGXXPXPPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
P P PPP G G G P P P G GG
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGG 540
PPPP G +G PP P P GG
Sbjct: 459 PPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKNPXPXXXGGG 543
PPPP G F+GP PP P G
Sbjct: 25 PPPPNDSGHEFIGPSSGPPQVTITPSGVQSG 55
>Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 446 KXPPPPGXXGXXFWXPXPXPPXKTPXPXXXGG 541
K P P FW P PP TP P GG
Sbjct: 107 KKPAPAAPTATTFWIRSPTPP-NTPAPVVKGG 137
>Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 446 KXPPPPGXXGXXFWXPXPXPPXKTPXPXXXGG 541
K P P FW P PP TP P GG
Sbjct: 104 KKPAPAAPTATTFWIRSPTPP-NTPAPVVKGG 134
>Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 446 KXPPPPGXXGXXFWXPXPXPPXKTPXPXXXGG 541
K P P FW P PP TP P GG
Sbjct: 107 KKPAPAAPTATTFWIRSPTPP-NTPAPVVKGG 137
>Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 446 KXPPPPGXXGXXFWXPXPXPPXKTPXPXXXGG 541
K P P FW P PP TP P GG
Sbjct: 104 KKPAPAAPTATTFWIRSPTPP-NTPAPVVKGG 134
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 491 PXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXG 595
P P PP P P GG PP G P G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 452 PPPPGXXGXXFWXPXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXGGXPXKKXF 619
PPPP P PP P P GG PP GG KK +
Sbjct: 562 PPPPPPLPQNLSGAPPPPP---PPPPMLGGPPPPPPPPGGLMGPASNDAKTIKKIY 614
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 561 GGXKXXPPPXXXGXGVFXGGXGXGXQKXXPXXPGGGG 451
GG PPP G G G G P P GGG
Sbjct: 26 GGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGG 62
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 491 PXPXPPXKTPXPXXXGGGXXXXPPXGGXXXXPXXG 595
P P PP P P GG PP G P G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = -2
Query: 611 FXGXXPXFXGKXXXPPWGGXXPXPPPXXXGXGFXXGGXGXG 489
F P F P + P PPP F GG G G
Sbjct: 700 FVAPQPQFVAVAPQPQFVAVAPVPPPVAPAVAFAGGGGGGG 740
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 560 GGXXPXPPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
GG P PP G GG G G P P G G
Sbjct: 148 GGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPG 184
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 560 GGXXPXPPPXXXGXGFXXGGXGXGPKXXXPXPXGGGG 450
GG P PP G GG G G P P G G
Sbjct: 148 GGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRGPPG 184
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Frame = +1
Query: 451 PPPPXGXGXXFLGPXPXPPXKN-----PXPXXXG--GGXGFXPP 561
PPPP G G + P PP P P G GG G PP
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPP 799
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.152 0.535
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,364,765
Number of Sequences: 27780
Number of extensions: 219237
Number of successful extensions: 894
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -