Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M14
(922 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 149 3e-36
09_06_0213 - 21610887-21611198 149 3e-36
09_04_0227 + 15861410-15861721 149 3e-36
07_03_0825 + 21773710-21774021 149 3e-36
05_05_0150 + 22758060-22758371 149 3e-36
05_05_0128 - 22591720-22592031 149 3e-36
04_04_0926 - 29462363-29462674 149 3e-36
03_01_0134 + 1060551-1060862 149 3e-36
02_05_0333 - 28012829-28013140 149 3e-36
01_06_1262 + 35833882-35834193 149 3e-36
05_05_0130 - 22598744-22599043,22599296-22599307 121 9e-28
04_01_0619 - 8125611-8127967,8128449-8130123 30 2.3
02_05_0591 - 30183105-30183869 29 6.9
06_01_1181 + 10148653-10149405 28 9.1
>10_08_0780 - 20500344-20500655
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>09_06_0213 - 21610887-21611198
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>09_04_0227 + 15861410-15861721
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>07_03_0825 + 21773710-21774021
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>05_05_0150 + 22758060-22758371
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>05_05_0128 - 22591720-22592031
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>04_04_0926 - 29462363-29462674
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>03_01_0134 + 1060551-1060862
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>02_05_0333 - 28012829-28013140
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>01_06_1262 + 35833882-35834193
Length = 103
Score = 149 bits (361), Expect = 3e-36
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVT TEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 121 bits (291), Expect = 9e-28
Identities = 59/77 (76%), Positives = 66/77 (85%)
Frame = +1
Query: 148 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKT 327
V R IQGI KP IRRLAR+GGVKRISGLIY+ETR VL++FL+NVI DA+T TEHA RKT
Sbjct: 22 VFRGYIQGIAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTEHAHRKT 81
Query: 328 VTAMDVVYALKRQGRTL 378
V AMDVVYALK QGRT+
Sbjct: 82 VMAMDVVYALKLQGRTI 98
>04_01_0619 - 8125611-8127967,8128449-8130123
Length = 1343
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 165 SRNNEACHSKIGATRRRQTYIRPDLRGNTQRSKGFSRERYPGRGYXHRAR 314
+ NN + S+ T Q+Y R + RSK R R+PG+ + R R
Sbjct: 553 NNNNFSAASRAAVTS--QSYAAASWRSHPSRSKAARRRRWPGQAWSQRMR 600
>02_05_0591 - 30183105-30183869
Length = 254
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 220 RISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKTVTAMDVVYALKRQG 369
+IS E + + ++ + +A + +RKT+TA DV++A+ R G
Sbjct: 55 KISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSRLG 104
>06_01_1181 + 10148653-10149405
Length = 250
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 220 RISGLIYEETRSVLKVFLENVIRDAVTXTEHAKRKTVTAMDVVYALKRQG 369
+IS E + + F+ V +A RKTVTA D+V+A+ R G
Sbjct: 54 KISDDAKEVIQECVSEFISFVTGEANDRCHREHRKTVTAEDLVWAMDRLG 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,321,591
Number of Sequences: 37544
Number of extensions: 180381
Number of successful extensions: 469
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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