Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_M12
         (928 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0970 + 26424209-26424910,26425053-26425109,26425251-264254...    31   1.3  

>06_03_0970 +
           26424209-26424910,26425053-26425109,26425251-26425478,
           26425788-26425881,26425955-26426161,26426581-26426711,
           26426943-26426992,26427125-26427432,26427548-26427651,
           26427810-26428526,26429159-26429338,26429703-26429831
          Length = 968

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 85  KHRNRNKLKSLGKDHNELKYLNFRKIHSKITINSRSRVSTS 207
           KH+ + K++ LGKD + L+  NF++  S + +N    ++ S
Sbjct: 25  KHQKQFKMEKLGKDQDALEDANFQQKPSSVDLNRLMELANS 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,083,377
Number of Sequences: 37544
Number of extensions: 330354
Number of successful extensions: 3164
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3048
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)