BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M11
(934 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 27 0.81
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 27 0.81
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 27 0.81
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 26 1.4
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 22 2.8
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 25 4.3
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 7.6
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 7.6
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 24 7.6
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 24 7.6
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 27.1 bits (57), Expect = 0.81
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 756 GGGGGXXXGGGXXGXXXXXGPFLGXLA 676
GGGGG GGG G G LG A
Sbjct: 553 GGGGGGGGGGGGGGVGGGIGLSLGGAA 579
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 27.1 bits (57), Expect = 0.81
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 756 GGGGGXXXGGGXXGXXXXXGPFLGXLA 676
GGGGG GGG G G LG A
Sbjct: 554 GGGGGGGGGGGGGGVGGGIGLSLGGAA 580
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 27.1 bits (57), Expect = 0.81
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +3
Query: 618 PGXWGXPPKKXGXXXXXXXXPXPPKXGPXXXXXPXAPPXXXGPPHPLXGXXKGGAPP 788
P + P K PP+ G P APP GP PL G PP
Sbjct: 64 PNPFTAGPPKPNISIPPPTMNMPPRPG-MIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 26.2 bits (55), Expect = 1.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 716 PXXPPPXXXPPPPPXG 763
P PP PPPPP G
Sbjct: 577 PNAQPPPAPPPPPPMG 592
Score = 24.6 bits (51), Expect = 4.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 717 PXAPPXXXGPPHPLXGXXKGG 779
P PP PP PL G GG
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGG 605
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 21.8 bits (44), Expect(2) = 2.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 431 F*IXXXGGGXGGGG 472
F I GGG GGGG
Sbjct: 524 FQIPNGGGGGGGGG 537
Score = 21.4 bits (43), Expect(2) = 2.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 449 GGGXGGGGXXKKXPPPXKKXPP 514
GGG GGGG + PP
Sbjct: 531 GGGGGGGGREGSQEWNSRSRPP 552
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 24.6 bits (51), Expect = 4.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 756 GGGGGXXXGGGXXGXXXXXGPFLG 685
GGGGG GGG G LG
Sbjct: 654 GGGGGGGGGGGSVGSGGIGSSSLG 677
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 296 GGGGGGGGGGGGGG 309
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 297 GGGGGGGGGGGGGG 310
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 300 GGGGGGGGGGGSAG 313
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 296 GGGGGGGGGGGGGG 309
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 297 GGGGGGGGGGGGGG 310
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 300 GGGGGGGGGGGSAG 313
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 248 GGGGGGGGGGGGGG 261
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 249 GGGGGGGGGGGGGG 262
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 252 GGGGGGGGGGGSAG 265
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 547 GGGGGGGGGGGGGG 560
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 550 GGGGGGGGGGGVIG 563
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.8 bits (49), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 756 GGGGGXXXGGGXXG 715
GGGGG GGG G
Sbjct: 15 GGGGGGGGGGGPSG 28
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.316 0.149 0.500
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,416
Number of Sequences: 2352
Number of extensions: 8265
Number of successful extensions: 99
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -