Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M10
(937 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.006
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 37 0.024
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 36 0.042
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 36 0.042
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 33 0.22
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.22
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.29
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.29
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.29
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.39
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.39
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.39
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.68
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 32 0.68
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 32 0.68
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 32 0.68
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 0.90
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 0.90
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 30 2.7
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.7
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 2.7
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 2.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.6
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 4.8
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 29 4.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 6.3
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 6.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 6.3
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 8.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P P PP PP P P P PPP G
Sbjct: 262 GSPPPPRTGSPPPP-PTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/90 (27%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = +2
Query: 599 PPXXGGXXPPPXXGENPQKXFFXKXPXXPPXTXXXPXXXFXXXAXXXXXXXXXXXXXXXG 778
PP G PPP G +P P PP P + G
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP-----TGSLPPPQAGGSPPPAGTG 327
Query: 779 XPPPPXXKKXPXXXPQKXPP--XPPXFSXP 862
PPPP +K P++ PP PP S P
Sbjct: 328 SPPPPPRQK--RQAPERSPPTGSPPTGSPP 355
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKP------XPXPPPXGXS 916
PPPP K P PP PP P P P PPP G S
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXP----XPPP 904
G PPPP P PP PP S P P P PPP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXP--XPPPXG 910
PPPP P PP PP P P PPP G
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 598 PPPXGGXXPPPXXXGKPP 651
PPP G PPP G PP
Sbjct: 313 PPPQAGGSPPPAGTGSPP 330
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P P PP PP P P P PPP G
Sbjct: 283 GSPPPPRTGSPPPP-PTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/90 (27%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = +2
Query: 599 PPXXGGXXPPPXXGENPQKXFFXKXPXXPPXTXXXPXXXFXXXAXXXXXXXXXXXXXXXG 778
PP G PPP G +P P PP P + G
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP-----TGSLPPPQAGGSPPPAGTG 348
Query: 779 XPPPPXXKKXPXXXPQKXPP--XPPXFSXP 862
PPPP +K P++ PP PP S P
Sbjct: 349 SPPPPPRQK--RQAPERSPPTGSPPTGSPP 376
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKP------XPXPPPXGXS 916
PPPP K P PP PP P P P PPP G S
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXP----XPPP 904
G PPPP P PP PP S P P P PPP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXP--XPPPXG 910
PPPP P PP PP P P PPP G
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 598 PPPXGGXXPPPXXXGKPP 651
PPP G PPP G PP
Sbjct: 334 PPPQAGGSPPPAGTGSPP 351
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P P PP PP P P P PPP G
Sbjct: 268 GSPPPPRTGSPPPP-PTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/90 (27%), Positives = 30/90 (33%), Gaps = 2/90 (2%)
Frame = +2
Query: 599 PPXXGGXXPPPXXGENPQKXFFXKXPXXPPXTXXXPXXXFXXXAXXXXXXXXXXXXXXXG 778
PP G PPP G +P P PP P + G
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP-----TGSLPPPQAGGSPPPAGTG 333
Query: 779 XPPPPXXKKXPXXXPQKXPP--XPPXFSXP 862
PPPP +K P++ PP PP S P
Sbjct: 334 SPPPPPRQK--RQAPERSPPTGSPPTGSPP 361
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKP------XPXPPPXGXS 916
PPPP K P PP PP P P P PPP G S
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXP----XPPP 904
G PPPP P PP PP S P P P PPP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXP--XPPPXG 910
PPPP P PP PP P P PPP G
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 598 PPPXGGXXPPPXXXGKPP 651
PPP G PPP G PP
Sbjct: 319 PPPQAGGSPPPAGTGSPP 336
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 36.7 bits (81), Expect = 0.024
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXP 898
PPPP K P P PP PP FS P P P P
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFS-PSMILPPPPPPLP 1397
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPPP P PP PP P P PPP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPPP P PP PP P P PPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP 1379
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.9 bits (79), Expect = 0.042
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPX-PPXFSXPXXXXXXKPXPXPPP 904
PPPP P P PP PP F P P P PPP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPP P PQ PP PP P P PPP
Sbjct: 40 PPPLPCPPPPICPPQFCPP-PPMCPPPPPPPPPPMCPPPPP 79
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 35.9 bits (79), Expect = 0.042
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 903 GGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
GGG G+ GW + GG GG WG G GG G
Sbjct: 42 GGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNG 82
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 903 GGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGG 784
GGG G G G G GG WG G GGG
Sbjct: 131 GGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGG 170
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXP----PXPPXFSXPXXXXXXKPXPXPPP 904
PPPP K P P P PP S P P P PPP
Sbjct: 325 PPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPP 369
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/96 (26%), Positives = 26/96 (27%)
Frame = +2
Query: 623 PPPXXGENPQKXFFXKXPXXPPXTXXXPXXXFXXXAXXXXXXXXXXXXXXXGXPPPPXXK 802
PPP G P K PP P PPPP
Sbjct: 512 PPPAPG--PHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLP 569
Query: 803 KXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
+ P PP PP P P P PPP G
Sbjct: 570 QNLSGAPPPPPPPPPMLGGP-------PPPPPPPGG 598
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.29
Identities = 28/104 (26%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Frame = +2
Query: 599 PPXXG--GXXPPPXXGENPQKXFFXKXPXXPPXTXXXPXXXFXXXAXXXXXXXXXXXXXX 772
PP G PPP G P P PP + P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM-----GGMPPPPPPGMRYP 344
Query: 773 XGXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
G PPPP + P P PP PP P P PPP
Sbjct: 345 GGMPPPP-PPRYPSAGPGMYPPPPPS-RPPAPPSGHGMIPPPPP 386
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 785 PPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPP PQ+ PP P P P P PPP
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.29
Identities = 28/104 (26%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Frame = +2
Query: 599 PPXXG--GXXPPPXXGENPQKXFFXKXPXXPPXTXXXPXXXFXXXAXXXXXXXXXXXXXX 772
PP G PPP G P P PP + P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM-----GGMPPPPPPGMRYP 354
Query: 773 XGXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
G PPPP + P P PP PP P P PPP
Sbjct: 355 GGMPPPP-PPRYPSAGPGMYPPPPPS-RPPAPPSGHGMIPPPPP 396
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGG 767
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCP------PPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 496 PPPPXXXXXFXGXXXXXXXXXXXXXXGGXGGXXFPPPXGGXXPPPXXXGKPPKXFFXKXP 675
PPPP G G G PPP GG PPP PP F P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPP---PPPPGGFKGGP 784
Query: 676 XXXP 687
P
Sbjct: 785 PPPP 788
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 712 GPPPPPGLPPITGGPP---PPPPPGGLPPITGG---PPPPPPPGG 750
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
G PP P P PP PP P P P PPP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPP--PPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGG 767
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCP------PPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 496 PPPPXXXXXFXGXXXXXXXXXXXXXXGGXGGXXFPPPXGGXXPPPXXXGKPPKXFFXKXP 675
PPPP G G G PPP GG PPP PP F P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPP---PPPPGGFKGGP 784
Query: 676 XXXP 687
P
Sbjct: 785 PPPP 788
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 712 GPPPPPGLPPITGGPP---PPPPPGGLPPITGG---PPPPPPPGG 750
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
G PP P P PP PP P P P PPP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPP--PPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGG 350
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCP------PPPPPPPPGG 362
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +1
Query: 496 PPPPXXXXXFXGXXXXXXXXXXXXXXGGXGGXXFPPPXGGXXPPPXXXGKPPKXFFXKXP 675
PPPP G G G PPP GG PPP PP F P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPP---PPPPGGFKGGP 367
Query: 676 XXXP 687
P
Sbjct: 368 PPPP 371
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPPXG 910
G PPPP P PP PP P P P PPP G
Sbjct: 295 GPPPPPGLPPITGGPP---PPPPPGGLPPITGG---PPPPPPPGG 333
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 776 GXPPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
G PP P P PP PP P P P PPP
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPP--PPPGGFKGGPPPPPPP 373
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQ-----KXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPPP P PQ K PP PP P P PPP
Sbjct: 467 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -2
Query: 909 PXGGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
P GGG G G+ GW + GG G WG G GGGG
Sbjct: 244 PGGGGQG-GYGGDYGGGWGQQGGGGQGGWG---GPQQQQGGGG 282
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -2
Query: 909 PXGGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
P GGG G G+ GW + GG G WG G GGGG
Sbjct: 206 PGGGGQG-GYGGDYGGGWGQQGGGGQGGWG---GPQQQQGGGG 244
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -2
Query: 909 PXGGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
P GGG G G+ GW + GG G WG G GGGG
Sbjct: 244 PGGGGQG-GYGGDYGGGWGQQGGGGQGGWG---GPQQQQGGGG 282
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPPP P + P P + P P P PPP
Sbjct: 575 PPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPP 615
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPX-FSXPXXXXXXKPXPXPPP 904
PPP P PP PP P P P PPP
Sbjct: 615 PPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPPP P + P P + P P P PPP
Sbjct: 401 PPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPP 441
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPX-FSXPXXXXXXKPXPXPPP 904
PPP P PP PP P P P PPP
Sbjct: 441 PPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 5/52 (9%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQ---KXPPXPPXFSX--PXXXXXXKPXPXPPPXGXSXA 922
PPPP P P PP PP P P P PPP G A
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVA 126
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 583 GGXXFPPPX-GGXXPPPXXXGKPP 651
GG PPP GG PPP G PP
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPP 115
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPPP P PP PP P P P PPP
Sbjct: 189 PPPPSFNINPFQPMFSQPPPPP---LPPNSQFMTPPPRPPP 226
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 903 GGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
GGG G G G GG GG G G GGGG
Sbjct: 63 GGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGG 103
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 909 PXGGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
P GGG G GW + GG G WG G GGGG
Sbjct: 206 PGGGGQGGYGGGNYGGGWGQQGGGGQGGWG---GPQQQQGGGG 245
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 909 PXGGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
P GGG G GW + GG G WG G GGGG
Sbjct: 244 PGGGGQGGYGGGNYGGGWGQQGGGGQGGWG---GPQQQQGGGG 283
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 903 GGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
GG G G+ G+ GG GG + G G+ GGGG
Sbjct: 208 GGMGGGGYGGGGDGGYGPSGGYGGGY-GPGGGYGMGGGGGG 247
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -2
Query: 900 GGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
GG G G+ GW GG G WG G GGGG
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGN--WGGNGG--GGNGGGG 93
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -1
Query: 904 RGGXGXGFXXXXXXGXGKXGGXGGXFLGXXXGXFFXSGGGG 782
RGG G G G G+ GG GG G G GGGG
Sbjct: 94 RGGGGGGGGGRGGGGGGRGGGGGGG--GGRGGGGGGRGGGG 132
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +2
Query: 782 PPPPXXKKXPXXX----PQKXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPPP K P PQ+ P PP P P P PPP
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAV---PAPAPPP 69
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXP-PXPPXFSXPXXXXXXKPXPXPPP 904
PPPP P P+ P P P P +P P P P
Sbjct: 97 PPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHP 138
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 903 GGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
G G G G GW GG G G G + GGGG
Sbjct: 232 GWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGG 272
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 904 RGGXGXGFXXXXXXGXGKXGGXGGXFLGXXXGXFFXSGGGG 782
RGG G G G G GG GG G GGGG
Sbjct: 212 RGGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGG 252
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = -1
Query: 937 VXXVXGRALPXRGGXGXGFXXXXXXGXGKXGGXGGXFLGXXXGXFFXSGGGG 782
+ + GR L RGG G G G GG GG G G GGGG
Sbjct: 11 IFSLLGRNLDARGGRGRGGGGGGRGSSGARGGVGGRGGGGRGG-----GGGG 57
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -2
Query: 903 GGGXGXGFXXXXXXGWEKXGGXGGXFWGXXXGFFXXXGGGG 781
GGG G G G GG GG +G G GGGG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGG 95
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPP 901
PPPP P P PP PP + P P PP
Sbjct: 76 PPPPLPLSNPPAKP-TPPPPPPKPTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQKXPPXPPXFSXPXXXXXXKPXPXPP 901
PPPP P P PP PP + P P PP
Sbjct: 298 PPPPLPLSNPPAKP-TPPPPPPKPTIRPPPIPASPPPRPP 336
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 904 RGGXGXGFXXXXXXGXGKXGGXGGXFLGXXXGXFFXSGGGG 782
RGG G G+ G G GG GG + G G GG G
Sbjct: 29 RGGGGGGYSGGRGGGYG--GGGGGGYGGGGYGGGGRGGGRG 67
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 6/47 (12%)
Frame = +2
Query: 782 PPPPXXKKXPXXXPQ------KXPPXPPXFSXPXXXXXXKPXPXPPP 904
PPPP P PQ PP PP P P PPP
Sbjct: 474 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,044,769
Number of Sequences: 27780
Number of extensions: 184632
Number of successful extensions: 1673
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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