Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M08
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1071.05 |||S-adenosylmethionine-dependent methyltransferase ... 64 2e-11
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 42 2e-04
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 36 0.010
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 35 0.017
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 33 0.040
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 30 0.49
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 30 0.49
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 27 2.6
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 27 3.5
SPAC23C4.06c |||methyltransferase |Schizosaccharomyces pombe|chr... 27 4.6
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 26 6.1
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 26 6.1
>SPAC1071.05 |||S-adenosylmethionine-dependent methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 64.5 bits (150), Expect = 2e-11
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Frame = +2
Query: 473 SDLVTGKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQN---- 640
+DLV YEGG K WEC+ DL + D+++ VL+LGCG+ I + Q
Sbjct: 92 NDLVPNVYEGGYKTWECSLDLANEI-KKIDVVKNNLTTVLELGCGSAIPILSCFQEFYKH 150
Query: 641 --GANVTFQDYNKEVLENVTIPNVLVNIEEKFREKEIKDVNFTLEI 772
+ FQD+N +VL VT+PN+L+N +E + + + T+++
Sbjct: 151 RIPCTLVFQDFNVDVLRYVTLPNLLLNWYFCTQEHDSSEKHGTIDV 196
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +2
Query: 542 YLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGANVTFQDYNKEVLENVTIPNVLVN-I 718
++ +NK I F K VLD+GCG GIL ++ + GA + N ++++ + I N N +
Sbjct: 246 FVYHNKHI--FAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSDIIQ-MAISNAFENGL 302
Query: 719 EEKFREKEIKDVNFTLEIGLLSIIXYQTM 805
++ K + +L +G + II + M
Sbjct: 303 ADQITFIRGKIEDISLPVGKVDIIISEWM 331
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 35.5 bits (78), Expect = 0.010
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +2
Query: 488 GKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGA 646
G +E LK T +M N + F+DK VLD+GCG GIL ++ + GA
Sbjct: 27 GIHEEMLKDDVRTLSYRDAIMQNPHL--FRDKIVLDVGCGTGILSMFCARAGA 77
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 34.7 bits (76), Expect = 0.017
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 572 FQDKNVLDLGCGAGILGIYALQNGANVTFQDYNKEVLE 685
F K +LD+GCG GIL + GA+VT D + +E
Sbjct: 76 FSGKKILDIGCGGGILSESMARLGASVTAVDASPMAIE 113
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 33.5 bits (73), Expect = 0.040
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 512 IWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGAN-VTFQDY 667
+W +L Y+ N D + + K VL+LG GAG+ I + +GA V DY
Sbjct: 57 LWNSGIELANYIDKNPDTV--RAKKVLELGAGAGLPSIVSAFDGAKFVVSTDY 107
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 29.9 bits (64), Expect = 0.49
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 272 DEEISWLASEEVKPDKQIKEVDEINLLYLASLPCRETVIRHIMPTKII--AELKNKELQN 445
++EI+ L ++ KP+ + E+ ++ L L S+P E+V H TK+I + N N
Sbjct: 81 EKEINELV-DDWKPEPLVAELTDVEKLELKSIPVLESVHLH---TKLIDGRPITNFASFN 136
Query: 446 VLNTAEKEH 472
L+ AE +H
Sbjct: 137 FLDLAENKH 145
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 29.9 bits (64), Expect = 0.49
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 503 GLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGANVTFQDYNKEVL 682
G + WE L +Y+ + ++ VL+LG G G++ I + G+ V D + +V
Sbjct: 149 GARTWEAGMALAEYIYQHP--VQ-SGMRVLELGAGTGLVSILCAKMGSIVLATDGDTKVC 205
Query: 683 ----ENVTIPNVLVNIEE 724
EN + N +N+++
Sbjct: 206 DGVRENARLNNCDINVKK 223
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 584 NVLDLGCGAGILGI-YALQNGANVTFQDYNKEVLENVTIPNVLVNIE 721
N L+LG G G++GI A+Q G V D +++EN+ NV N E
Sbjct: 138 NALELGAGTGLVGISAAIQLGWQVVCTDL-PDIVENMQY-NVDYNSE 182
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 398 MPTKIIAELKNKELQNV-LNTAEKEHSDLVTGKYEGGLKIW 517
MP+K I + K + + V ++T + +VTG ++G +K+W
Sbjct: 91 MPSKPIHKWKEHKAEIVAIDTNTVDRRIVVTGSWDGTIKLW 131
>SPAC23C4.06c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 327
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 575 QDKNVLDLGCGAGILGI 625
+D NVL+LG G GI+GI
Sbjct: 182 KDINVLELGSGCGIVGI 198
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 479 LVTGKYEGGLKIW-----ECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNG 643
LV+G Y+ ++IW EC Y L + + ++ ++N+ G + ++ L G
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG 579
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 470 HSDLVTGKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKN-VLDLGCGAGILGIYALQNGA 646
++D+ GKY +I ++ + + ++++ + + +LD+GCG+GI G
Sbjct: 14 YNDVEAGKYSTNTRIQSIQTEMSERAL---ELLDAEGPSFILDIGCGSGISTQIGESQGH 70
Query: 647 NVTFQDYNKEVL 682
V D + +L
Sbjct: 71 VVVGMDISPSML 82
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,050,079
Number of Sequences: 5004
Number of extensions: 58291
Number of successful extensions: 189
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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