Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M08
(873 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0349 + 24588184-24588315,24588481-24588543,24588674-245887... 77 2e-14
09_04_0721 + 19725695-19725697,19725793-19725859,19725944-197260... 73 4e-13
03_01_0302 - 2361948-2362649,2363422-2363617,2363873-2363997,236... 36 0.032
07_03_1453 - 26649922-26650064,26650148-26650244,26651260-266514... 35 0.074
06_03_0878 + 25606788-25606926,25607205-25607279,25607362-256074... 35 0.098
03_06_0526 - 34515218-34515372,34515454-34515567,34515651-345157... 34 0.13
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 33 0.30
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 32 0.52
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 32 0.69
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 32 0.69
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 31 0.91
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 31 0.91
02_05_0723 + 31228782-31228994,31229098-31229193,31229469-312294... 30 2.1
04_04_1360 + 32889597-32890343 30 2.8
10_08_0421 + 17793875-17794536,17794558-17795515,17795689-17796243 29 3.7
03_01_0169 + 1385813-1388359 29 3.7
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 29 4.9
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 28 8.5
01_06_0966 - 33453963-33456692 28 8.5
>04_04_0349 +
24588184-24588315,24588481-24588543,24588674-24588740,
24588819-24588919,24589082-24589126,24589236-24589697,
24589905-24590075
Length = 346
Score = 76.6 bits (180), Expect = 2e-14
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 473 SDLVTGKYEGGLKIWECTYDLLQYLMNN-KD-IIEFQDKNVLDLGCGAGILGIYALQNGA 646
S++V KY+G LK WE + L+ + N +D + F+ K VL+LGCG+G+ GI+A GA
Sbjct: 79 SEVVASKYDGSLKYWESSITLVNIIKNEIRDGQLSFRGKRVLELGCGSGLAGIFACLKGA 138
Query: 647 N-VTFQDYNKEVLENVTIPNVLVNIEE 724
+ V FQD N E + IPNVL N+E+
Sbjct: 139 STVHFQDTNAETIRCRAIPNVLANLEQ 165
>09_04_0721 +
19725695-19725697,19725793-19725859,19725944-19726044,
19726780-19726824,19727052-19727522,19727972-19728142
Length = 285
Score = 72.5 bits (170), Expect = 4e-13
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +2
Query: 473 SDLVTGKYEGGLKIWECTYDLLQYLMNN-KD-IIEFQDKNVLDLGCGAGILGIYALQNGA 646
S+++T K EG LK E + DL+ L N +D ++ F+ K VL+LGCG G+ GI+A GA
Sbjct: 15 SEVITPKGEGPLKCCESSIDLVNVLKNEIRDGLLTFRSKQVLELGCGYGLPGIFACLKGA 74
Query: 647 N-VTFQDYNKEVLENVTIPNVLVNIE 721
+ V FQD + E++ TIPNVL N+E
Sbjct: 75 STVHFQDPSAEIIRCKTIPNVLANLE 100
>03_01_0302 -
2361948-2362649,2363422-2363617,2363873-2363997,
2364118-2364180,2364445-2364495,2364597-2364668,
2364779-2364886,2365031-2365135,2365505-2365555,
2365971-2365995,2366234-2366258,2366352-2366439
Length = 536
Score = 36.3 bits (80), Expect = 0.032
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Frame = +2
Query: 269 DDEEISWLASEEVKPDKQIKEVDEINLLYLASLPCRETVIRHIMPTKIIAELKNKELQNV 448
+ ++++ AS+E ++I ++ N ++ S E + I + K + +
Sbjct: 267 EKDKLTANASQEKSTSEEIDLSEDFNNMFGTSHNLDEAQVLRI-------KAKGHDFEIK 319
Query: 449 LNTAEKEHSDLVTGKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCG-AGILGI 625
+ T E +H+ +TG L +WE + L N I+ K VL+LGCG AGI +
Sbjct: 320 MLTKEHQHTCKLTG-----LMLWESAQFMCSVLAENPSILA--GKRVLELGCGSAGICSM 372
Query: 626 YALQNGANVTFQDYNKEVLENVTIPNVLVNIEEKFREK 739
A V D + E L+ + N N+E +K
Sbjct: 373 VAATVAQFVVATDGDAESLD-LLRENTASNLEPDLLKK 409
>07_03_1453 -
26649922-26650064,26650148-26650244,26651260-26651418,
26651478-26651603
Length = 174
Score = 35.1 bits (77), Expect = 0.074
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 512 IWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGANVTFQDYNKEVLE 685
+W + YL + + ++ D ++++LG G GI GI + V D+N EVLE
Sbjct: 97 VWPGAVLMNTYLSEHPETVK--DHSIIELGSGVGITGILCSRFCKEVVLTDHNDEVLE 152
>06_03_0878 +
25606788-25606926,25607205-25607279,25607362-25607426,
25607504-25607606,25607712-25607762,25608271-25608424,
25608781-25608925,25609039-25609144,25609267-25609415
Length = 328
Score = 34.7 bits (76), Expect = 0.098
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 503 GLKIWECTYDLLQYLMNNK-DIIEFQDKNVLDLGCGAGILGIYALQNGANVTFQDYNKEV 679
GL++W+ L ++++ EF +++G G G++G+ + + D ++
Sbjct: 91 GLQVWKAALLLTDFVLHKSFTSSEFNGVTAIEIGAGTGLVGLALARVAKKIFITDRGSDI 150
Query: 680 LENVTIPNVLVN 715
L+N + NV +N
Sbjct: 151 LDN-CLANVQLN 161
>03_06_0526 -
34515218-34515372,34515454-34515567,34515651-34515722,
34515832-34515974,34516457-34516635,34517798-34517874,
34517994-34518150
Length = 298
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 512 IWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQN-GANVTFQDYNK-EVLE 685
+W T+ +L+ NK I+ + +L+LG G G L I+ + ++T DY+ E+ E
Sbjct: 110 LWPGTFLFADWLVKNKSILH--GRRILELGSGTGALAIFLRKAFQVDITTTDYDDGEIQE 167
Query: 686 NV 691
N+
Sbjct: 168 NI 169
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 545 LMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGANVTFQDYNKEVLEN 688
+M N+ +F+ + V+D+G G+GIL ++A Q GA + E+ E+
Sbjct: 198 VMENRS--DFEGRVVVDVGAGSGILSLFAAQAGARHVYAVEASEMAEH 243
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 545 LMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGANVTF 658
+M+++ IE K V+D+GCG GIL ++ + GA +
Sbjct: 75 IMHHQKFIE--GKVVMDVGCGTGILSVFCARAGAKCVY 110
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 31.9 bits (69), Expect = 0.69
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = -1
Query: 540 CNKS*VHSHIFSPPSYFPVTRSLCSFSAVFKTFCNSLFFSSAIILVGIIC---LITVSRH 370
C ++ V H+ P S P R L S V T +SSA +V +IC L +++
Sbjct: 661 CPRTSVAPHLCLPRSMAPHLRVLRKISKVHSTNMPEAHYSSAATMVPVICKPPLFGITQK 720
Query: 369 GSEAR*SKFISSTSFICLSG 310
G S + +T + L G
Sbjct: 721 GHGVHTSSMMCTTPNVVLHG 740
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 572 FQDKNVLDLGCGAGILGIYALQNGANVTF 658
F+ K VLD+G G+GIL I++ Q GA +
Sbjct: 66 FRGKVVLDVGTGSGILAIWSAQAGARKVY 94
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 31.5 bits (68), Expect = 0.91
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 587 VLDLGCGAGILGIYALQNGAN 649
VLD+GCG GIL ++A + GA+
Sbjct: 295 VLDVGCGTGILSLFAAKAGAS 315
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 296 SEEVKPDKQIKEVDEINLLYLASLPCRETVIRHIMPTKIIA-ELKNKELQNVLNTAEKEH 472
SEE + ++++E+ E N+ + + E+ R + KI + EL+NK+L + L +KEH
Sbjct: 411 SEEQRLRERVRELAEQNVSFQREVTLLESN-RIDVSNKITSLELQNKQLNDELQKVKKEH 469
Query: 473 SDLVTGKYE 499
L+ E
Sbjct: 470 DTLLKSSVE 478
>02_05_0723 +
31228782-31228994,31229098-31229193,31229469-31229492,
31229663-31229881,31229957-31230025,31230230-31230316,
31231122-31231226
Length = 270
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 494 YEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAG-ILGIYALQNGANVTFQDYN 670
YE + +++ + + QY + KN+L+LG G G L YA +G N+ D N
Sbjct: 100 YEAEISLYQNS-QIAQYKSKLFSQLMTAGKNILELGVGTGPNLKYYANADGVNIVGVDPN 158
Query: 671 KEVLE 685
K + E
Sbjct: 159 KHMEE 163
>04_04_1360 + 32889597-32890343
Length = 248
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 449 LNTAEKEHS-DLVTGKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGI 625
L AE++ + D TG+ G +W+ + L +L + + VL+LG G G+ GI
Sbjct: 25 LAVAERDGTHDPATGRALTGSWLWDSSLVLASHLASCVHHHHLRGATVLELGAGTGLPGI 84
Query: 626 YAL 634
A+
Sbjct: 85 AAV 87
>10_08_0421 + 17793875-17794536,17794558-17795515,17795689-17796243
Length = 724
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 272 DEEISWLASEEVKPDKQIKEVDEINLLYLASLPCRETVIRH 394
DEEI WL + P + L +L CR V RH
Sbjct: 538 DEEIYWLVDPALGPASATTTTPPTSACELVALDCRNAVARH 578
>03_01_0169 + 1385813-1388359
Length = 848
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 320 QIKEVDEINLLYLASLPCRETVIRHIMPTKIIAELKNKELQNVLNTAEKEHSDLVTGKYE 499
Q E DEINL A ++ + I +I ++ L+ TAEK +D +
Sbjct: 713 QSLERDEINLAEWAVSLQQKGELAKITDPRIAGQVNGNSLRKFAETAEKCLADYGLDRPS 772
Query: 500 GGLKIWECTYDL-LQYLMNNKDIIE 571
G +W Y L LQ N+D E
Sbjct: 773 MGDVLWNLEYCLQLQETHVNRDAFE 797
>06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 503 GLKIWECTYDLLQYLMNNKD--IIEFQDKNVLDLGCGAGILGIYALQNGANVTFQD 664
G +W+ L ++L + D ++ + L+LG G G+ G A GA+V D
Sbjct: 973 GAVVWDSGVVLAKFLEHAVDSGLLTLRAARALELGAGCGLAGCVAALLGAHVLLTD 1028
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 587 VLDLGCGAGILGIYALQNGA 646
VLD+GCG G+L I+ GA
Sbjct: 85 VLDVGCGTGVLSIFCAFAGA 104
>01_06_0966 - 33453963-33456692
Length = 909
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 611 GILGIYALQN-GANVTFQDYNKEVLENVTIPNVLVNIE 721
GI+GIY + G YN + L N NV +NIE
Sbjct: 169 GIVGIYGMAGVGKTALLNKYNNDFLINSPDINVAINIE 206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,612,945
Number of Sequences: 37544
Number of extensions: 312600
Number of successful extensions: 827
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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