Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M08
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical pr... 81 8e-16
Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical pr... 37 0.016
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 36 0.050
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 35 0.087
Z70750-14|CAC42268.1| 450|Caenorhabditis elegans Hypothetical p... 31 0.81
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 31 1.1
AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical ... 31 1.4
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 30 1.9
L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 29 3.3
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 29 3.3
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 29 3.3
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 29 3.3
Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical pr... 29 4.3
U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical p... 29 5.7
AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A prote... 29 5.7
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 5.7
Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical
protein K01A11.2 protein.
Length = 229
Score = 81.4 bits (192), Expect = 8e-16
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = +2
Query: 419 ELKNKELQNVLNTAEKEHSDLVTGKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDL 598
E KEL+N+ E SD+ KYEGG KIWECT DL Y+ N+ + F K+VL+L
Sbjct: 31 ERYKKELENM------ETSDITVHKYEGGFKIWECTVDLCDYIEENQTL--FAGKSVLEL 82
Query: 599 GCGAGILGIYALQNGANVTF-QDYNKEVLENVTIPN 703
GCGA + I +GA F QD+N V+E T+PN
Sbjct: 83 GCGAALPSILTAVHGAKEVFAQDFNASVIEFFTLPN 118
>Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical
protein R08D7.4 protein.
Length = 371
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 503 GLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGI-YALQNGANVTFQDYNKEV 679
GL +W+ + DL +I + +L+LG G G+ GI A N VT DY+ V
Sbjct: 165 GLSVWQASCDLANLFR----LIPSEYNRILELGSGCGVSGIAIAKMNDCCVTLTDYDDNV 220
Query: 680 LENVTIPNVLVN 715
L N+ N+ N
Sbjct: 221 L-NLLEENIAKN 231
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 35.5 bits (78), Expect = 0.050
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 473 SDLVTGKYEGGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGA-N 649
SD T Y + W L+ + +DK VLD+GCG G+ LQ GA
Sbjct: 3 SDFPTDPYSTAQQKWLYQDHLVLPTLEKLLKYNLKDKKVLDIGCGNGLNSTTFLQWGARK 62
Query: 650 VTFQDYNKEVLEN 688
V D ++E++EN
Sbjct: 63 VVGFDNSQEMIEN 75
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.087
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 572 FQDKNVLDLGCGAGILGIYALQNGANVTF-QDYNKEVL--ENVTIPNVLVNIEEKFREKE 742
F+DK V+D+G G GIL ++A + GA F +++ L + N L +I E + K
Sbjct: 61 FKDKVVMDVGSGTGILSMFAAKAGAKKVFAMEFSNMALTSRKIIADNNLDHIVEVIQAK- 119
Query: 743 IKDVN 757
++DV+
Sbjct: 120 VEDVH 124
>Z70750-14|CAC42268.1| 450|Caenorhabditis elegans Hypothetical
protein C50F4.16 protein.
Length = 450
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 239 FIKIKSGHNIKQL-FNANGLTRNFHSNLKPN*PLCSTSDSAPRKI 108
F K K G+N K++ F NG+TRN+ L PN C D +++
Sbjct: 252 FDKKKYGYNPKRMIFTINGITRNWDLALCPNTATCILVDMVKKEL 296
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 500 GGLKIWECTYDLLQYLMNNKDIIEFQDKNVLDLGCGAGILGIYALQNGANVTFQD 664
GG+ IW+ + Y F+ K VL+LG G G+ GI GA+V D
Sbjct: 31 GGV-IWDSALMTIHYFFKYPK--PFEGKKVLELGSGTGVGGIALAALGADVIITD 82
>AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical
protein C33C12.9 protein.
Length = 234
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 557 KDIIEFQDKNVLDLGCGAGILGIYALQN-GANVT--FQDYNKEVLENVTIPNVLVN 715
K+I K VL++GCG+G++ + Q G NVT D N L+ VT+ +N
Sbjct: 50 KEIRSRDPKLVLEIGCGSGVVSTFVNQALGGNVTSVATDLNPHALD-VTLETAKLN 104
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -1
Query: 498 SYFPVTRSLCSFSAVFKTFCNSLFFSSAIILVGIICLITVSRHG 367
+Y+ + +LC+ ++ TFC +F+S ++ CL++ + HG
Sbjct: 120 NYYYLMVTLCALISLLVTFCKFVFYSDEVV---TNCLLSTALHG 160
>L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical
protein F22B7.9 protein.
Length = 243
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 572 FQDKNVLDLGCGAGILGIYALQNGA-NVTFQDYNKEVLENVTIPNVLVN 715
F K+VL++G G+ +YA +NGA + +K LE P + N
Sbjct: 82 FDGKSVLEIGFVTGLPSVYAFENGAEEIAMHTMDKTSLELYCRPTLKRN 130
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 377 ETVIRHIMPTKIIAELKNKELQNVL-NTAEKEHSDLVTGKY-EGGLKIWECTYDLLQYLM 550
+ V+ ++ K ++ L++++ N N E +++V GKY +G L W+ +YD L+
Sbjct: 641 DVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPKGLLSAWD-SYDKLKESE 699
Query: 551 NNK-DIIEFQDKN-VLDLGCGAGI 616
N + D+ D+N +L + GI
Sbjct: 700 NTRPDVYSSIDQNFILFVSANGGI 723
>Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical
protein C45G3.3 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 449 LNTAEKEHSDLVTGKYEGGLKIWECTYDL---LQYLMNNKDIIEFQDKNVLD 595
+N AE+ + K LK W+ Y QY NK IIE +D VLD
Sbjct: 229 VNVAEEVKKNAEISKIFDELKAWKWIYGKSPKFQYSRENKSIIEVKDGLVLD 280
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 377 ETVIRHIMPTKIIAELKNKELQNVL-NTAEKEHSDLVTGKY-EGGLKIWECTYDLLQYLM 550
+ V+ ++ K ++ L++++ N N E +++V GKY +G L W+ +YD L+
Sbjct: 641 DVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPKGLLSAWD-SYDKLKESE 699
Query: 551 NNK-DIIEFQDKN-VLDLGCGAGI 616
N + D+ D+N +L + GI
Sbjct: 700 NTRPDVYSSIDQNFILFVSANGGI 723
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 377 ETVIRHIMPTKIIAELKNKELQNVL-NTAEKEHSDLVTGKY-EGGLKIWECTYDLLQYLM 550
+ V+ ++ K ++ L++++ N N E +++V GKY +G L W+ +YD L+
Sbjct: 641 DVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPKGLLSAWD-SYDKLKESE 699
Query: 551 NNK-DIIEFQDKN-VLDLGCGAGI 616
N + D+ D+N +L + GI
Sbjct: 700 NTRPDVYSSIDQNFILFVSANGGI 723
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 572 FQDKNVLDLGCGAGILGIYALQNGANVTFQD 664
F+ K VL+LG G G+ GI GA+V D
Sbjct: 13 FEGKKVLELGSGTGVGGIALAALGADVIITD 43
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 377 ETVIRHIMPTKIIAELKNKELQNVL-NTAEKEHSDLVTGKY-EGGLKIWECTYDLLQYLM 550
+ V+ ++ K ++ L++++ N N E +++V GKY +G L W+ +YD L+
Sbjct: 349 DVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPKGLLSAWD-SYDKLKESE 407
Query: 551 NNK-DIIEFQDKN-VLDLGCGAGI 616
N + D+ D+N +L + GI
Sbjct: 408 NTRPDVYSSIDQNFILFVSANGGI 431
>Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical
protein F32A7.4 protein.
Length = 529
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 563 IIEFQDKNVLDLGCGAGILGIYALQN 640
I +FQ + VLD G GAG G +A+QN
Sbjct: 200 IPDFQPETVLDFGSGAG-AGFWAIQN 224
>U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical
protein R151.10 protein.
Length = 233
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +2
Query: 272 DEEISWLASEE-----VKPDKQIKEVDEINL-LYLAS--LPCRETVIRHIMPTKIIAELK 427
DE I WL +E V P++ ++ DE+ + ++ S +P E ++RH++ T + L
Sbjct: 52 DESIRWLINELKIGDLVTPEEYSRQYDELLIEMFKRSPAMPGAEKLVRHLLHTGVPVALC 111
Query: 428 NKELQNVLNTAEKEHSDLV 484
T H D V
Sbjct: 112 TGSCSRTFPTKLDNHKDWV 130
>AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A protein
protein.
Length = 233
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +2
Query: 272 DEEISWLASEE-----VKPDKQIKEVDEINL-LYLAS--LPCRETVIRHIMPTKIIAELK 427
DE I WL +E V P++ ++ DE+ + ++ S +P E ++RH++ T + L
Sbjct: 52 DESIRWLINELKIGDLVTPEEYSRQYDELLIEMFKRSPAMPGAEKLVRHLLHTGVPVALC 111
Query: 428 NKELQNVLNTAEKEHSDLV 484
T H D V
Sbjct: 112 TGSCSRTFPTKLDNHKDWV 130
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 694 YSQCISKYRRKIQRKRDK-RCKFYSGDWTPFNNXLP 798
Y C+S+Y+R +++K D+ RC +G + N +P
Sbjct: 2243 YVCCVSRYQRYLKQKTDQLRCSSSAGSYYKSPNLIP 2278
>Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical
protein M28.8 protein.
Length = 831
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 434 ELQNVLNTAEKEHSDLVTGKYEGGLKI 514
+L NV+N+ H D+VT GLKI
Sbjct: 353 DLNNVMNSLASAHRDVVTSSAYSGLKI 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,497,326
Number of Sequences: 27780
Number of extensions: 317347
Number of successful extensions: 982
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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