Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M07
(869 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1112 + 30984925-30985101,30985204-30985851 36 0.056
03_01_0476 - 3660327-3661261,3661401-3661668 35 0.097
02_02_0280 - 8515894-8517309 33 0.39
01_06_0422 - 29226526-29226672,29226771-29227211,29227325-29227384 32 0.52
01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369 32 0.69
05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824 31 1.2
03_02_0841 - 11669707-11670468 30 2.1
11_01_0768 - 6442332-6443792 29 3.7
11_01_0511 + 3969874-3970269 29 6.4
02_05_0850 + 32209798-32210086,32210779-32212316 28 8.5
>04_04_1112 + 30984925-30985101,30985204-30985851
Length = 274
Score = 35.5 bits (78), Expect = 0.056
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Frame = +2
Query: 524 KAAESAINTAKDTVSSTLESTKSAAQTAAETGKS----YIDTAT---ENTKSAAQSAFDT 682
+ AE A++ A + T+E TK A + AE K ++TA E K AAQ A+
Sbjct: 169 ETAEGAMDRAGEAKDRTVEGTKHAGEKVAEMTKEGASKVVETAQAIGEKAKQAAQGAWGA 228
Query: 683 SKTFAASARDT 715
+K A +DT
Sbjct: 229 TKEAAQGVKDT 239
>03_01_0476 - 3660327-3661261,3661401-3661668
Length = 400
Score = 34.7 bits (76), Expect = 0.097
Identities = 24/95 (25%), Positives = 42/95 (44%)
Frame = +2
Query: 521 KKAAESAINTAKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAA 700
++ + + A+D E+ + + AAE + D+A E T SA +A + A
Sbjct: 212 QETLRQSTDAARDKAGKAQETLRQSTDAAAEKAGAAKDSAWERTSSAKDAAAEK----AG 267
Query: 701 SARDTAQDSLQTTLNSYVSAAYSAIDIGRTCLETA 805
SA+D A + + ++ A +A D R E A
Sbjct: 268 SAKDAAWEKTSSAKDAAAEKAGAAKDAAREKAEAA 302
>02_02_0280 - 8515894-8517309
Length = 471
Score = 32.7 bits (71), Expect = 0.39
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = +2
Query: 521 KKAAESAINTAKDTVSSTLESTKSA----AQTAAETGKSYIDTATENTKSAAQSAFD-TS 685
K+A +A A D ++ K A AQ A E K TAT+ + AA A D T
Sbjct: 147 KQAGSTAATRAADYAAAKGTEAKDAGAHAAQAATEKAKVAAGTATDYARQAAAKAKDVTL 206
Query: 686 KTFAASARDTAQDSLQT--TLNSYV-SAAYSAIDIGRTCLETA 805
T +A T +L T T + Y AA D+ + ETA
Sbjct: 207 STGGTAAEKTKDVALSTGGTASEYAKQAAVKGKDVTLSAGETA 249
>01_06_0422 - 29226526-29226672,29226771-29227211,29227325-29227384
Length = 215
Score = 32.3 bits (70), Expect = 0.52
Identities = 23/76 (30%), Positives = 29/76 (38%)
Frame = +2
Query: 551 AKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASARDTAQDSL 730
AKD + T +S A+ A SYI E K A A +K A + +D L
Sbjct: 106 AKDRAADTAQSAADRARDGAGQTGSYIGQTAEAAKQKAAGAAQYAKETAIAGKDKTGAVL 165
Query: 731 QTTLNSYVSAAYSAID 778
Q S A A D
Sbjct: 166 QQAGEQVKSVAVGAKD 181
>01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369
Length = 672
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 772 SGIRSAHIRI*CCLQRILRCISSASRKRLACIECGLGRRFRVLCGSVD 629
+G A +R+ L+R+ RC+ S++RLA IE L R L VD
Sbjct: 62 AGGAEARVRVMAALRRLARCVGCESKERLASIE-ALSSIVRSLSRDVD 108
>05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824
Length = 200
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 521 KKAAESAINTAKDTVSSTLESTK-SAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFA 697
K+ A AKD SST ++ + AA++ +TG ++ TE K A +K
Sbjct: 67 KERASETAQAAKDKTSSTSQAARDKAAESKDQTG-GFLGEKTEQAKQKAAETAGAAKQKT 125
Query: 698 ASARDTAQDS 727
A +DS
Sbjct: 126 AETAQYTKDS 135
>03_02_0841 - 11669707-11670468
Length = 253
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 521 KKAAESAINTAKDTVSSTLESTKSAAQ-TAAETGKSYIDTATENTKSAAQSAFDTSKTFA 697
K A AKDT + K + TA ET + DTA + A + DT++T A
Sbjct: 182 KDALARKTRDAKDTTAQKATEFKDGVKATAQETRDATADTA----RKAKDATKDTTQTAA 237
Query: 698 ASARDTA 718
AR+TA
Sbjct: 238 DKARETA 244
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 527 AAESAINTAKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASA 706
A+E+ N + + T+ A T A+ + D K+ AQ D + A A
Sbjct: 170 ASEATKNKLGEYKDALARKTRDAKDTTAQKATEFKD----GVKATAQETRDATADTARKA 225
Query: 707 RDTAQDSLQT 736
+D +D+ QT
Sbjct: 226 KDATKDTTQT 235
>11_01_0768 - 6442332-6443792
Length = 486
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +2
Query: 527 AAESAINTAKDTVSSTL--ESTKSAAQTAAETGKSYI--DTATENTKSAAQSAFDTSKTF 694
AAES ++TA + + + T AA++ + S + TA +NT AA SA + +
Sbjct: 407 AAESTVDTATSAAAGSTADKETSPAAESTVDKETSAVAGSTADKNTYPAAGSAAEKETSS 466
Query: 695 AASAR---DTAQDSLQTT 739
AA + DTA + TT
Sbjct: 467 AAGSAPVVDTAPAAPPTT 484
>11_01_0511 + 3969874-3970269
Length = 131
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 603 PRRKPENRTSTLPQRTRNRRPNPHSIQARR 692
P R+ R +LP+ RR PH + ARR
Sbjct: 25 PTREATEREKSLPRSVTRRRRRPHLLPARR 54
>02_05_0850 + 32209798-32210086,32210779-32212316
Length = 608
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 630 STLPQRTRNRRPNPHSIQARRLRLALEIQRR 722
S L +R RRP+PH + RLR+ E+QRR
Sbjct: 133 SYLYRRNPGRRPSPHLV--ARLRMHEELQRR 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,633,474
Number of Sequences: 37544
Number of extensions: 359587
Number of successful extensions: 1169
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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