Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M06
(957 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 182 9e-45
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 182 2e-44
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 152 1e-35
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 148 2e-34
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 119 1e-25
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 116 7e-25
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 114 3e-24
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 105 1e-21
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 99 8e-20
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 83 8e-15
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 77 9e-13
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 74 6e-12
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 71 3e-11
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 46 0.001
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 43 0.010
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 43 0.013
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 43 0.013
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 42 0.018
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 42 0.018
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 42 0.023
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 42 0.031
UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - ... 42 0.031
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 41 0.041
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 41 0.041
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 41 0.054
UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:... 40 0.094
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 40 0.12
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 40 0.12
UniRef50_O67723 Cluster: 30S ribosomal protein S9; n=2; Aquifex ... 39 0.22
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 38 0.38
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 38 0.38
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 38 0.50
UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.50
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 37 0.87
UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial... 37 0.87
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 37 0.87
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 37 0.87
UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondr... 36 1.2
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 36 2.0
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 35 2.7
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 35 2.7
UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachi... 35 3.5
UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein DKFZp4... 35 3.5
UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20; Bacteri... 34 6.2
UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n... 33 8.2
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 182 bits (444), Expect = 9e-45
Identities = 84/101 (83%), Positives = 96/101 (95%)
Frame = +1
Query: 34 SLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 213
+L++ L EP+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASK
Sbjct: 46 TLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASK 105
Query: 214 KEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
KEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 106 KEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 182 bits (442), Expect = 2e-44
Identities = 84/101 (83%), Positives = 95/101 (94%)
Frame = +1
Query: 34 SLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 213
+LR+ L EPILLLGKE+F+ VDIR+ VKGGG+VAQ+YAIRQAISKAL+A+YQKYVDE SK
Sbjct: 48 TLRYKLLEPILLLGKERFAGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQSK 107
Query: 214 KEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
KEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 108 KEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 152 bits (368), Expect = 1e-35
Identities = 69/102 (67%), Positives = 85/102 (83%)
Frame = +1
Query: 31 NSLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEAS 210
N+ + + EP+L++G +KF+ VDIRV V GGGH +QVYAIRQAI+K+L+A+YQKYVDE S
Sbjct: 54 NTTKLIAYEPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAKSLVAYYQKYVDEHS 113
Query: 211 KKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
K ++K VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 114 KNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 148 bits (359), Expect = 2e-34
Identities = 68/100 (68%), Positives = 83/100 (83%)
Frame = +1
Query: 37 LRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 216
LRF + EP+LL+G +KFS +DIRV V GGGHV+QVYAIRQAI+K L+A++QKYVDE SK
Sbjct: 44 LRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKN 103
Query: 217 EIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
E+K YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 104 ELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 119 bits (286), Expect = 1e-25
Identities = 56/100 (56%), Positives = 76/100 (76%)
Frame = +1
Query: 37 LRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 216
LR + EPI++LG+ F +D+ + V GGGHV+Q+YA+RQAIS+ ++A + DEA++
Sbjct: 62 LRTKVSEPIMILGESLFKGLDMNIKVAGGGHVSQIYAVRQAISRGVLASVK---DEAARS 118
Query: 217 EIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
E++ LV YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 119 ELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 116 bits (280), Expect = 7e-25
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +1
Query: 88 SMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 267
S VDIR+ V GGG +Q+YAIRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIAD 176
Query: 268 PRRCEPKKFGGPGARARYQKSYR 336
RR EPKKFGG GARAR QKSYR
Sbjct: 177 TRRSEPKKFGGHGARARRQKSYR 199
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 114 bits (275), Expect = 3e-24
Identities = 54/102 (52%), Positives = 72/102 (70%)
Frame = +1
Query: 31 NSLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEAS 210
++LR + E I ++G + +S + I V V GGG V+Q YA RQAI+K LIAF+QKY +E
Sbjct: 48 DTLRAKIMEAITVVGSKYYSRLRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEVE 107
Query: 211 KKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
K +KD + YD+ LL+ADPRRCEPKK+G AR R+ KSYR
Sbjct: 108 KAALKDKFLAYDKFLLIADPRRCEPKKWGRHSARTRFTKSYR 149
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 105 bits (253), Expect = 1e-21
Identities = 51/96 (53%), Positives = 68/96 (70%)
Frame = +1
Query: 49 LQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKD 228
L+E I ++ + + +T K GG V++VYA+R A +KA++AFY Y DE K+EI+
Sbjct: 50 LKEIICIVEQANIKDLSFDITCKIGGDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQK 109
Query: 229 ILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
L+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 110 RLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 99 bits (238), Expect = 8e-20
Identities = 45/94 (47%), Positives = 64/94 (68%)
Frame = +1
Query: 55 EPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 234
EP +LG + ++ + KGGG V+Q+YAIRQ+ISK L+ +Y KY+ + +K
Sbjct: 46 EPFFILGSNERLNLNFDIFSKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKY 105
Query: 235 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
+ YD+ LL++D R EPKK+GG GARAR+QKSYR
Sbjct: 106 LTYDKKLLISDVSRIEPKKYGGLGARARFQKSYR 139
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 83.4 bits (197), Expect = 8e-15
Identities = 43/108 (39%), Positives = 71/108 (65%), Gaps = 9/108 (8%)
Frame = +1
Query: 40 RFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQ---------K 192
R + EP+L+ G+ S+VDIRV V+GGG + Q A+R AI++ L+ F++ +
Sbjct: 45 RIKMMEPLLIAGEGVRSLVDIRVRVEGGGVMGQADAVRMAIARGLVEFFRCEESDDELCR 104
Query: 193 YVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
+D+ S ++++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 105 MMDKIS-RDLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 76.6 bits (180), Expect = 9e-13
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Frame = +1
Query: 40 RFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 219
RF + EP++L G+E ++ VDI V V+GGG + Q A R AI++AL V+
Sbjct: 42 RFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARAL-------VEWTGDMN 94
Query: 220 IKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 336
+K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 95 LKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 73.7 bits (173), Expect = 6e-12
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +1
Query: 34 SLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 213
+L++ L E LLL KE+ + +DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS
Sbjct: 57 TLQYKLLELGLLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS- 115
Query: 214 KEIKDILVQ 240
+EIKD L +
Sbjct: 116 EEIKDTLTR 124
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 71.3 bits (167), Expect = 3e-11
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Frame = +1
Query: 25 IGNSLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY--- 195
+ S R + P+ + G + VDI V VKGGG + Q A IS+ALI + +
Sbjct: 40 VHESAREAILAPLDIAGDAR-KKVDISVRVKGGGFMGQAGASATGISRALIGWTKSRREP 98
Query: 196 ----VDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
+ + ++++++ + +D+ L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 99 RNHPLTKTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 46.0 bits (104), Expect = 0.001
Identities = 36/96 (37%), Positives = 49/96 (51%)
Frame = +1
Query: 49 LQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKD 228
L++P++ G EK DI VTVKGGG Q A R I++AL+ + Y +K ++
Sbjct: 49 LEQPLVATGTEKD--FDITVTVKGGGFTGQAGATRLGIARALLVASEDY-----RKGLRA 101
Query: 229 ILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
+ LL D R E KK+G GAR Q S R
Sbjct: 102 V------GLLTRDARIKERKKYGLRGARRAPQYSKR 131
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 43.2 bits (97), Expect = 0.010
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 40 RFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAI 150
++ L +PIL LGKE+F+ V I V V G G VAQ+YAI
Sbjct: 66 QYQLLDPILPLGKERFARVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 42.7 bits (96), Expect = 0.013
Identities = 35/100 (35%), Positives = 46/100 (46%)
Frame = +1
Query: 37 LRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 216
L+ +LQ+PI+ + DI TV GGG Q A+R IS+AL FY+ + KK
Sbjct: 74 LQMILQQPIVATNRN--GQYDIVATVVGGGLSGQAGAVRHGISRAL-TFYEPELRAVLKK 130
Query: 217 EIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
L D R E KK+G AR +Q S R
Sbjct: 131 ----------GGFLTRDSRVVERKKYGRAKARRSFQFSKR 160
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 42.7 bits (96), Expect = 0.013
Identities = 33/101 (32%), Positives = 48/101 (47%)
Frame = +1
Query: 34 SLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 213
+L+ ++++P++ G E D+RV V GGG Q AIR I++AL+ VD +
Sbjct: 43 TLKLIVKQPLVETGTE--GQYDVRVNVDGGGFTGQAGAIRHGIARALL-----QVDPEYR 95
Query: 214 KEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
+K L D R E KK+G AR Q S R
Sbjct: 96 PSLK------SAGFLTRDARMKERKKYGLKAARRAPQFSKR 130
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 42.3 bits (95), Expect = 0.018
Identities = 33/99 (33%), Positives = 50/99 (50%)
Frame = +1
Query: 40 RFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 219
R ++++P++ L + S D+ TV+GGG Q AIR I++ALI +Y +E +
Sbjct: 48 RMVVRQPLVKLDVQ--SRFDVYATVQGGGDSGQAGAIRHGITRALI----QYDEEGGEGG 101
Query: 220 IKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
++ + DPR E KK G GAR Q S R
Sbjct: 102 TWRSTLR-KAGFVTRDPRMVERKKVGLHGARRGTQFSKR 139
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 42.3 bits (95), Expect = 0.018
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +1
Query: 37 LRFLLQEPILLLG-KEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 213
L F +QEP+ L K +F+++ + VKGGG V QV AI+ I++AL F Y +
Sbjct: 55 LIFAIQEPLHFLKLKNEFNLI---IKVKGGGLVGQVNAIKLGIARALCEFDLTYRNSLKL 111
Query: 214 KEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
K L DPR E KK+G AR Q S R
Sbjct: 112 K-----------GFLTRDPRCKERKKYGLKKARKAPQFSKR 141
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 41.9 bits (94), Expect = 0.023
Identities = 36/99 (36%), Positives = 48/99 (48%)
Frame = +1
Query: 40 RFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 219
R ++++P+ LL + DI TVKGGG Q AIR I++ALI DE K
Sbjct: 43 RMVVRQPLELL--DSAETYDIYATVKGGGINGQAGAIRHGITRALIE-----SDETLKPA 95
Query: 220 IKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
+K + + D R+ E KK G AR R Q S R
Sbjct: 96 LK------EAGFVTRDSRQVERKKLGLRKARKRPQFSKR 128
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 41.5 bits (93), Expect = 0.031
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 31 NSLRF-LLQEPILLL-GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDE 204
N+L F + +P+LL + KF D + V GGG +Q AI AIS+AL F D
Sbjct: 43 NNLLFNKISKPLLLTYNQNKF---DFYIKVSGGGINSQAEAISLAISRALCKF-----DI 94
Query: 205 ASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
K +K+ ++LL DPR E KK+G +R +Q S R
Sbjct: 95 NHKPILKE------QNLLTRDPRMVERKKYGKKKSRKNFQFSKR 132
>UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p -
Drosophila melanogaster (Fruit fly)
Length = 395
Score = 41.5 bits (93), Expect = 0.031
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +1
Query: 79 EKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLL 258
E VD+ V+GGG Q AIR I+ +L +F + + E+ + LL
Sbjct: 320 ELLGKVDVEANVEGGGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLL 369
Query: 259 VADPRRCEPKKFGGPGARARY 321
D RR E KKFG GAR +Y
Sbjct: 370 TRDYRRRERKKFGQEGARRKY 390
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 41.1 bits (92), Expect = 0.041
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 327 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 376
Query: 277 CEPKKFGGPGARARY 321
E KK G GAR ++
Sbjct: 377 RERKKPGQEGARRKF 391
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 41.1 bits (92), Expect = 0.041
Identities = 34/100 (34%), Positives = 45/100 (45%)
Frame = +1
Query: 37 LRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 216
L+ +L +PI+ + DI TV GGG Q A+R ISKAL +Y+ + KK
Sbjct: 74 LQMILNQPII--ASNRSGQYDIVATVVGGGLSGQAGAVRHGISKAL-TYYEPALRAVLKK 130
Query: 217 EIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
L D R E KK+G AR +Q S R
Sbjct: 131 ----------GGFLTRDSRVVERKKYGKAKARRSFQFSKR 160
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 40.7 bits (91), Expect = 0.054
Identities = 33/101 (32%), Positives = 47/101 (46%)
Frame = +1
Query: 34 SLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASK 213
+LR + P++L D+ + V GGG Q AIR IS+AL +DE++K
Sbjct: 49 NLRTMALSPLVLTNT--LGKYDLYINVYGGGISGQSGAIRHGISRALFK-----LDESNK 101
Query: 214 KEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
++ L D R+ E KKFG AR +Q S R
Sbjct: 102 ------MILRSNGFLTRDSRKVERKKFGQKKARKSFQFSKR 136
>UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:
ENSANGP00000014497 - Anopheles gambiae str. PEST
Length = 84
Score = 39.9 bits (89), Expect = 0.094
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +1
Query: 67 LLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 246
LL + + +D+ V GGG +Q A+R I+ AL +F + D+ ++ +
Sbjct: 5 LLFTKMYGKIDVTANVSGGGPSSQAGAVRWGIAMALRSFVDE--DQIARMRV-------- 54
Query: 247 RSLLVADPRRCEPKKFGGPGARARY 321
LL D RR E KK G GAR +Y
Sbjct: 55 AGLLTRDYRRRERKKPGQAGARRKY 79
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 39.5 bits (88), Expect = 0.12
Identities = 32/80 (40%), Positives = 38/80 (47%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
DI V VKGGG Q AIR I +ALI F ++K +L + L D R
Sbjct: 64 DINVVVKGGGFTGQAGAIRLGIVRALIKF---------NPDLKKLL--KTKKLTTRDKRA 112
Query: 277 CEPKKFGGPGARARYQKSYR 336
E KKFG GAR Q + R
Sbjct: 113 KERKKFGLYGARRAPQFTKR 132
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 39.5 bits (88), Expect = 0.12
Identities = 32/99 (32%), Positives = 50/99 (50%)
Frame = +1
Query: 40 RFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 219
R + P+ +LG + D+ + V GGG QV A R +++A++ +K E K+E
Sbjct: 48 RATILAPLKMLGD--VNSFDLIIRVSGGGVQGQVIATRLGLARAVLQ--EK---EDMKQE 100
Query: 220 IKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
+K + L DPR+ E KK+G AR +Q S R
Sbjct: 101 LKS------QGFLTRDPRKKERKKYGRKKARKSFQFSKR 133
>UniRef50_O67723 Cluster: 30S ribosomal protein S9; n=2; Aquifex
aeolicus|Rep: 30S ribosomal protein S9 - Aquifex
aeolicus
Length = 147
Score = 38.7 bits (86), Expect = 0.22
Identities = 29/79 (36%), Positives = 40/79 (50%)
Frame = +1
Query: 100 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRC 279
I TV+GGG AQ AI ++KAL+ +++ L + LL D R
Sbjct: 80 IYATVRGGGISAQAEAIMYGVAKALLQH---------NPDLRPTLKK--AGLLTRDAREK 128
Query: 280 EPKKFGGPGARARYQKSYR 336
E KK+G GARA+Y+ S R
Sbjct: 129 ERKKYGQMGARAKYRWSKR 147
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 37.9 bits (84), Expect = 0.38
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +1
Query: 40 RFLLQEPILLLGK-EKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 216
+ ++++P+ L+ EKF D+ +TV GGG Q AIR I++AL+ + DEA +
Sbjct: 45 QMVVRQPLELVEMTEKF---DMYITVSGGGTTGQAGAIRHGITRALMQY-----DEALRG 96
Query: 217 EIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
++ + D R+ E KK G AR R Q S R
Sbjct: 97 PLR------KEGYVTRDARQVERKKIGLHKARKRPQFSKR 130
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 37.9 bits (84), Expect = 0.38
Identities = 31/90 (34%), Positives = 39/90 (43%)
Frame = +1
Query: 67 LLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 246
L E F VD+ V V GGG Q AI I++AL A+ ++ + S
Sbjct: 123 LKATETFGKVDVWVRVTGGGTTGQTGAIVLGIARALEAYNNQFHETLSAGR--------- 173
Query: 247 RSLLVADPRRCEPKKFGGPGARARYQKSYR 336
L D R E KKFG AR +Q S R
Sbjct: 174 --FLTRDSRMVERKKFGFKKARKSFQFSKR 201
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 37.5 bits (83), Expect = 0.50
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +1
Query: 34 SLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 195
+L+ ++ P++L+ +E DI V V GGG AQ AI+ ISKAL+ + ++
Sbjct: 45 ALKLRVRWPLMLVKQE--GNFDIEVKVLGGGFAAQADAIKHGISKALVEYAPEF 96
>UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlorella vulgaris|Rep: Chloroplast 30S ribosomal
protein S9 - Chlorella vulgaris (Green alga)
Length = 137
Score = 37.5 bits (83), Expect = 0.50
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
D+ + V+GGG AQ A++ A+SKA + F+ +Y +K K LL D R
Sbjct: 69 DVHILVEGGGLSAQAQAVKLALSKAFVDFFPEY-----RKVFK------KPGLLTRDARI 117
Query: 277 CEPKKFGGPGARARYQKSYR 336
E +K+G AR Q S R
Sbjct: 118 KERRKYGLKKARKAPQFSKR 137
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 36.7 bits (81), Expect = 0.87
Identities = 29/80 (36%), Positives = 37/80 (46%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
D+R +V GGGH Q A+ I+KALI F D ++ +K L D R
Sbjct: 81 DVRCSVAGGGHTGQAGAMVHGIAKALILF-----DSENRAVLK------TEKLNTRDSRS 129
Query: 277 CEPKKFGGPGARARYQKSYR 336
E KK G AR +Q S R
Sbjct: 130 VERKKPGRRKARRSFQFSKR 149
>UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: 40S
ribosomal protein S9, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 132
Score = 36.7 bits (81), Expect = 0.87
Identities = 28/75 (37%), Positives = 38/75 (50%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
++ TV GGG Q A+ AISK+LI + E S K+ V D ++ D R+
Sbjct: 64 NVWATVHGGGPTGQSGAVHAAISKSLI------LQEPSLKQ-----VIKDTHCVLNDKRK 112
Query: 277 CEPKKFGGPGARARY 321
E KK G P AR +Y
Sbjct: 113 VERKKTGQPKARKKY 127
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 36.7 bits (81), Expect = 0.87
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
D+ + V GGG Q A+R I++AL+ + Q ++ +L +Y +L DPR
Sbjct: 66 DLVIRVNGGGLSGQSGAVRLGIARALLQYDQ---------NLRPVLKKY--KMLTRDPRE 114
Query: 277 CEPKKFGGPGARARYQKSYR 336
E KK+G AR Q S R
Sbjct: 115 VERKKYGLKKARRAPQFSKR 134
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 36.7 bits (81), Expect = 0.87
Identities = 29/80 (36%), Positives = 38/80 (47%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
D+ + V GGG QV AIR A+++A+ ++ A KKE L DPR
Sbjct: 71 DLNLNVTGGGTTGQVGAIRHALARAICRIKPEF-RPAVKKE----------GFLTRDPRM 119
Query: 277 CEPKKFGGPGARARYQKSYR 336
E KK+G AR Q S R
Sbjct: 120 VERKKYGLHKARRGTQFSKR 139
>UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S9 isoform 1; n=1; Gallus gallus|Rep:
PREDICTED: similar to mitochondrial ribosomal protein S9
isoform 1 - Gallus gallus
Length = 340
Score = 36.3 bits (80), Expect = 1.2
Identities = 28/75 (37%), Positives = 36/75 (48%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
D TV GGG +Q AIR A +KAL + +V E ++ LL DPR
Sbjct: 271 DAICTVSGGGRSSQAGAIRLATAKAL----RSFVTET------EVEFMRQAGLLTVDPRV 320
Query: 277 CEPKKFGGPGARARY 321
E KK G GAR ++
Sbjct: 321 RERKKPGQEGARRKF 335
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 35.5 bits (78), Expect = 2.0
Identities = 33/97 (34%), Positives = 45/97 (46%)
Frame = +1
Query: 46 LLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIK 225
L++ P+ LG E + DI V GGG Q AIR I++AL +D ++K +K
Sbjct: 54 LVKAPLETLGLE--NSYDIYVNATGGGLTGQADAIRLGIARALC-----QLDIENRKPLK 106
Query: 226 DILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
L DPR E +K+G AR Q S R
Sbjct: 107 ------TEGYLTRDPRAKERRKYGLRKARKAPQYSKR 137
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 35.1 bits (77), Expect = 2.7
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 37 LRFLLQEPILLL-GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKAL 174
L+ ++++PI+ + EKF DIR V GGG Q A+R AI++AL
Sbjct: 48 LQTIVKQPIVAVDANEKF---DIRANVTGGGVAGQAEALRHAIARAL 91
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 35.1 bits (77), Expect = 2.7
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 195
DIRVTV+GGG Q AIR I++AL+ Y
Sbjct: 68 DIRVTVRGGGLAGQAGAIRLGIARALLEISADY 100
>UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: 30S
ribosomal protein S9 - Wolbachia sp. subsp. Brugia
malayi (strain TRS)
Length = 148
Score = 34.7 bits (76), Expect = 3.5
Identities = 30/80 (37%), Positives = 38/80 (47%)
Frame = +1
Query: 97 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 276
D+ TVKGGG Q A+ ISKAL Q ++ IL + L +
Sbjct: 80 DVFATVKGGGLSGQAGALAHGISKALSKISQ---------DLYSILRK--SGYLTRNSCV 128
Query: 277 CEPKKFGGPGARARYQKSYR 336
E KK+G GARA+YQ S R
Sbjct: 129 KERKKYGQRGARAKYQFSKR 148
>UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein
DKFZp469B0933; n=7; Theria|Rep: Putative uncharacterized
protein DKFZp469B0933 - Pongo pygmaeus (Orangutan)
Length = 300
Score = 34.7 bits (76), Expect = 3.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +1
Query: 28 GNSLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD-- 201
G + + L L ++ F + ++ H++QV++ ++ + LIAFY+ +
Sbjct: 40 GTACKHLALSDNLKPQEKMFFKSPVETALQYFSHISQVWSFQKKQTDLLIAFYKHRITKL 99
Query: 202 EASKKEIKDILVQYDRSLLVADPRRCEPKKF 294
E + +E + LV D+ L V E KKF
Sbjct: 100 ETAMQETQQALVSQDKELSVLRKENGELKKF 130
>UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20;
Bacteria|Rep: 30S ribosomal protein S9 - Rhodopirellula
baltica
Length = 137
Score = 33.9 bits (74), Expect = 6.2
Identities = 32/110 (29%), Positives = 49/110 (44%)
Frame = +1
Query: 7 SXTDXTIGNSLRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFY 186
S + + + R+ + E + G + VD+ + V GGG Q A+R +++AL +
Sbjct: 41 SIEEYFVNDQHRYAITETLEAAGLTE--SVDLLIRVSGGGMTGQAGAVRMGLARALCSH- 97
Query: 187 QKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
DEA ++ + S L D R E KK G GAR Q S R
Sbjct: 98 ----DEALHDPMR------EGSFLTRDSRMKERKKPGLRGARRGVQFSKR 137
>UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlamydomonas reinhardtii|Rep: Chloroplast 30S ribosomal
protein S9 - Chlamydomonas reinhardtii
Length = 191
Score = 33.5 bits (73), Expect = 8.2
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +1
Query: 73 GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 252
G E D V VKGGG + Q AIR IS+AL A++ + +I +
Sbjct: 85 GGENAVKFDTIVKVKGGGLMGQTEAIRLGISRALCLLSTNTNPSANQNNLPNIYIPEGEG 144
Query: 253 LLVADPRRCEPKK 291
+A P + +K
Sbjct: 145 EALAIPNASDIRK 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,202,305
Number of Sequences: 1657284
Number of extensions: 7442548
Number of successful extensions: 18224
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 17888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18206
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88590537959
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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