Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_M06
         (957 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          158   5e-39
11_01_0155 - 1287003-1287452                                          158   5e-39
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    32   0.78 

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  158 bits (384), Expect = 5e-39
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = +1

Query: 37  LRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 216
           LR    EPILL G+ +F  +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKK
Sbjct: 50  LRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKK 109

Query: 217 EIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
           E+KDI  +YDR+LLVADPRRCEPKKFGG GARAR+QKSYR
Sbjct: 110 EVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  158 bits (384), Expect = 5e-39
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = +1

Query: 37  LRFLLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKK 216
           LR    EPILL G+ +F  +D+R+ V+GGG  +Q+YAIRQAI+KAL+A+YQKYVDEASKK
Sbjct: 50  LRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKK 109

Query: 217 EIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 336
           E+KDI  +YDR+LLVADPRRCEPKKFGG GARAR+QKSYR
Sbjct: 110 EVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +1

Query: 97  DIRVTVKGGGHVAQVYAIRQAISKAL 174
           D+  TVKGGG   QV AIR  IS+AL
Sbjct: 347 DVTCTVKGGGVSGQVGAIRLGISRAL 372


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,420,691
Number of Sequences: 37544
Number of extensions: 215362
Number of successful extensions: 568
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)