Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M04
(891 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06609 Cluster: DNA repair protein RAD51 homolog 1; n=2... 259 8e-68
UniRef50_P25454 Cluster: DNA repair protein RAD51; n=111; Eukary... 215 1e-54
UniRef50_Q27297 Cluster: DNA repair protein Rad51 homolog; n=12;... 205 1e-51
UniRef50_Q8I9U4 Cluster: Recombinase Rad51; n=7; Aconoidasida|Re... 184 3e-45
UniRef50_A2ZKR2 Cluster: Putative uncharacterized protein; n=2; ... 171 2e-41
UniRef50_Q96449 Cluster: Meiotic recombination protein DMC1 homo... 161 2e-38
UniRef50_O61128 Cluster: Dmc1 homolog; n=11; Eukaryota|Rep: Dmc1... 154 3e-36
UniRef50_Q7RD33 Cluster: DNA repair protein rhp51; n=1; Plasmodi... 151 3e-35
UniRef50_A7ATP8 Cluster: Rad51 protein, putative; n=1; Babesia b... 148 2e-34
UniRef50_A6R196 Cluster: DNA repair protein RAD51; n=1; Ajellomy... 147 4e-34
UniRef50_Q14565 Cluster: Meiotic recombination protein DMC1/LIM1... 142 1e-32
UniRef50_Q00YW7 Cluster: Meiotic recombination protein DMC1, put... 141 2e-32
UniRef50_P25453 Cluster: Meiotic recombination protein DMC1; n=3... 138 1e-31
UniRef50_Q4S4D7 Cluster: Chromosome 2 SCAF14738, whole genome sh... 102 4e-29
UniRef50_UPI00005020FA Cluster: similar to RAD51 homolog protein... 124 2e-27
UniRef50_A2DHG2 Cluster: DNA repair protein RAD51 homolog, putat... 117 4e-25
UniRef50_Q8ZYR9 Cluster: DNA repair and recombination protein ra... 116 8e-25
UniRef50_Q55075 Cluster: DNA repair and recombination protein ra... 111 2e-23
UniRef50_A3KGH9 Cluster: RAD51 homolog; n=13; Eukaryota|Rep: RAD... 110 4e-23
UniRef50_Q3LW29 Cluster: DNA recombination and repair protein; n... 110 5e-23
UniRef50_UPI00006CB33C Cluster: hypothetical protein TTHERM_0045... 106 9e-22
UniRef50_Q49593 Cluster: DNA repair and recombination protein ra... 103 6e-21
UniRef50_O93748 Cluster: DNA repair and recombination protein ra... 100 4e-20
UniRef50_Q8C610 Cluster: Adult male testis cDNA, RIKEN full-leng... 98 2e-19
UniRef50_A1RYZ3 Cluster: Rad51-like; n=1; Thermofilum pendens Hr... 98 2e-19
UniRef50_Q8PZN5 Cluster: DNA repair and recombination protein ra... 94 4e-18
UniRef50_A3KGI2 Cluster: RAD51 homolog; n=1; Mus musculus|Rep: R... 91 5e-17
UniRef50_Q8TVF0 Cluster: RadA recombinase; n=1; Methanopyrus kan... 91 5e-17
UniRef50_UPI0000D55904 Cluster: PREDICTED: similar to Meiotic re... 90 6e-17
UniRef50_Q9HMM4 Cluster: DNA repair and recombination protein ra... 78 3e-13
UniRef50_A1RY65 Cluster: Rad51-like; n=1; Thermofilum pendens Hr... 73 7e-12
UniRef50_Q5JET4 Cluster: DNA repair and recombination protein ra... 62 1e-08
UniRef50_O58001 Cluster: DNA repair and recombination protein ra... 62 2e-08
UniRef50_Q4UAC7 Cluster: Meiotic recombination (DMC1-like) prote... 60 6e-08
UniRef50_Q7ZTX4 Cluster: Zgc:56581; n=6; Euteleostomi|Rep: Zgc:5... 60 7e-08
UniRef50_Q8GXF0 Cluster: DNA repair protein RAD51 homolog 3; n=5... 60 1e-07
UniRef50_UPI0000586FDE Cluster: PREDICTED: similar to RAD51L2/RA... 59 1e-07
UniRef50_Q4Q3T8 Cluster: Recombinase Rad51, putative; n=3; Leish... 56 1e-06
UniRef50_Q386Q5 Cluster: Recombinase Rad51, putative; n=1; Trypa... 56 2e-06
UniRef50_Q54QU4 Cluster: AAA ATPase domain-containing protein; n... 55 2e-06
UniRef50_Q4E2R1 Cluster: DNA recombination and repair protein RA... 54 4e-06
UniRef50_UPI0000E47207 Cluster: PREDICTED: hypothetical protein;... 52 2e-05
UniRef50_Q93YY9 Cluster: RAD51C protein; n=1; Chlamydomonas rein... 51 3e-05
UniRef50_Q657A2 Cluster: DNA repair protein radA (RadA)-like; n=... 51 5e-05
UniRef50_A4S2Y8 Cluster: Predicted protein; n=1; Ostreococcus lu... 49 2e-04
UniRef50_Q8SZ30 Cluster: RE19845p; n=2; Sophophora|Rep: RE19845p... 49 2e-04
UniRef50_O15315 Cluster: DNA repair protein RAD51 homolog 2; n=2... 48 4e-04
UniRef50_UPI0000F2B25B Cluster: PREDICTED: similar to RAD51-like... 47 6e-04
UniRef50_Q6FIZ6 Cluster: Similar to sp|P25301 Saccharomyces cere... 47 7e-04
UniRef50_Q6CMV0 Cluster: Similar to sp|P25301 Saccharomyces cere... 46 0.001
UniRef50_Q9V2F6 Cluster: DNA repair and recombination protein ra... 46 0.002
UniRef50_O43502 Cluster: DNA repair protein RAD51 homolog 3; n=3... 46 0.002
UniRef50_A0NCA9 Cluster: ENSANGP00000029732; n=2; Culicidae|Rep:... 45 0.002
UniRef50_Q8ZTI5 Cluster: DNA repair protein radA; n=5; Pyrobacul... 45 0.003
UniRef50_UPI0000E249BA Cluster: PREDICTED: RAD51 homolog C; n=1;... 44 0.004
UniRef50_Q6Q241 Cluster: Putative Rad51B protein; n=1; Chlamydom... 44 0.005
UniRef50_Q00XV2 Cluster: RAD51-like protein 2; n=2; Ostreococcus... 44 0.005
UniRef50_UPI0000DB74C1 Cluster: PREDICTED: similar to DNA-repair... 43 0.009
UniRef50_Q55WG1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.028
UniRef50_P25301 Cluster: DNA repair protein RAD57; n=2; Saccharo... 42 0.028
UniRef50_Q9Z8M2 Cluster: N Utilization Protein A; n=9; Chlamydia... 41 0.037
UniRef50_A2XZT8 Cluster: Putative uncharacterized protein; n=2; ... 41 0.037
UniRef50_Q9FKM5 Cluster: DNA-repair protein XRCC3 homolog; n=18;... 41 0.037
UniRef50_Q54PJ7 Cluster: Putative DNA repair protein; n=1; Dicty... 41 0.049
UniRef50_Q757K4 Cluster: AER008Wp; n=1; Eremothecium gossypii|Re... 41 0.049
UniRef50_O43542 Cluster: DNA-repair protein XRCC3; n=19; Euteleo... 40 0.11
UniRef50_UPI0000D56187 Cluster: PREDICTED: similar to CG3325-PA;... 39 0.20
UniRef50_Q9UUL2 Cluster: DNA repair protein rhp57; n=1; Schizosa... 39 0.20
UniRef50_Q9SK02 Cluster: DNA repair protein RAD51 homolog 2; n=6... 39 0.20
UniRef50_Q17A54 Cluster: Spindle-b recombination protein spn-b; ... 37 0.79
UniRef50_Q8TH00 Cluster: Predicted Superfamily II helicase; n=1;... 37 0.79
UniRef50_A7DQP6 Cluster: RecA/RadA recombinase-like protein; n=1... 37 0.79
UniRef50_O43543 Cluster: DNA-repair protein XRCC2; n=16; Tetrapo... 36 1.0
UniRef50_UPI0000E46317 Cluster: PREDICTED: similar to Trad; n=1;... 35 2.4
UniRef50_UPI0000499144 Cluster: DNA repair protein RAD51C; n=1; ... 35 2.4
UniRef50_Q4ST80 Cluster: Chromosome undetermined SCAF14285, whol... 35 2.4
UniRef50_Q4SSQ5 Cluster: Chromosome undetermined SCAF14352, whol... 35 2.4
UniRef50_A1CLE6 Cluster: Rad51 family DNA repair protein, putati... 35 2.4
UniRef50_Q8TWK1 Cluster: RadA recombinase; n=1; Methanopyrus kan... 35 2.4
UniRef50_Q4SEP3 Cluster: Chromosome undetermined SCAF14615, whol... 35 3.2
UniRef50_Q74A30 Cluster: Conserved domain protein; n=4; Geobacte... 35 3.2
UniRef50_Q7RQQ6 Cluster: DNA-directed RNA polymerase; n=9; Plasm... 35 3.2
UniRef50_Q8TUJ3 Cluster: DNA repair protein; n=6; Euryarchaeota|... 35 3.2
UniRef50_A2BXB3 Cluster: Putative uncharacterized protein; n=2; ... 34 4.2
UniRef50_Q22Y61 Cluster: Dynein heavy chain family protein; n=1;... 34 4.2
UniRef50_A3H7W4 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 34 4.2
UniRef50_A3FQK6 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q96MS0 Cluster: Roundabout homolog 3 precursor; n=23; E... 34 5.6
UniRef50_UPI000065EE6A Cluster: DNA-repair protein XRCC3 (X-ray ... 33 7.4
UniRef50_Q16EQ5 Cluster: Rad51A protein, putative; n=1; Aedes ae... 33 7.4
UniRef50_A0RYZ3 Cluster: RecA/RadA recombinase related protein; ... 33 7.4
UniRef50_Q1PL11 Cluster: Putative uncharacterized protein; n=2; ... 33 9.8
>UniRef50_Q06609 Cluster: DNA repair protein RAD51 homolog 1; n=22;
Eukaryota|Rep: DNA repair protein RAD51 homolog 1 - Homo
sapiens (Human)
Length = 339
Score = 259 bits (634), Expect = 8e-68
Identities = 125/183 (68%), Positives = 145/183 (79%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
AEA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL ++
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 868 XPD 876
D
Sbjct: 196 NTD 198
>UniRef50_P25454 Cluster: DNA repair protein RAD51; n=111;
Eukaryota|Rep: DNA repair protein RAD51 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 400
Score = 215 bits (525), Expect = 1e-54
Identities = 99/157 (63%), Positives = 123/157 (78%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPM 534
I KL+ NGIT D+KKL E+G HT E+VAYAP+K L+ IKGISEAKADK+L EA++LVPM
Sbjct: 83 IEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAARLVPM 142
Query: 535 GFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTC 714
GF TA +FH +R+E+I LTTGSK LD LL FRTGK+QLCHTLAVTC
Sbjct: 143 GFVTAADFHMRRSELICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTC 202
Query: 715 QLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGME 825
Q+P++ GGEGKC+YIDTEGTFRP RL+++AQR+G++
Sbjct: 203 QIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLD 239
>UniRef50_Q27297 Cluster: DNA repair protein Rad51 homolog; n=12;
Fungi/Metazoa group|Rep: DNA repair protein Rad51
homolog - Drosophila melanogaster (Fruit fly)
Length = 336
Score = 205 bits (501), Expect = 1e-51
Identities = 100/184 (54%), Positives = 126/184 (68%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKS 864
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TFRPERL A+AQRY + + VL ++
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRA 191
Query: 865 XXPD 876
D
Sbjct: 192 HNSD 195
>UniRef50_Q8I9U4 Cluster: Recombinase Rad51; n=7; Aconoidasida|Rep:
Recombinase Rad51 - Plasmodium falciparum
Length = 350
Score = 184 bits (448), Expect = 3e-45
Identities = 90/186 (48%), Positives = 116/186 (62%)
Frame = +1
Query: 319 LDEDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKAD 498
++E+ GP I +L G D++ L+E G TVE VAYAP + L IKGISE KA+
Sbjct: 23 IEEEQLYTGPLKIEQLLAKGFVKRDLELLKEGGLQTVECVAYAPMRTLCAIKGISEQKAE 82
Query: 499 KILAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTG 678
K+ +L GF A ++H R +I+ TTGSK+LD LL FRTG
Sbjct: 83 KLKKACKELCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITELFGEFRTG 142
Query: 679 KTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCIC 858
K+QLCHTLA+TCQLPIEQSGGEGKC++IDTEGTFRPER++A+A+RYG+ L
Sbjct: 143 KSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTDCLNNIAYA 202
Query: 859 KSXXPD 876
K+ D
Sbjct: 203 KAYNCD 208
>UniRef50_A2ZKR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 294
Score = 171 bits (417), Expect = 2e-41
Identities = 87/162 (53%), Positives = 113/162 (69%)
Frame = +1
Query: 337 ECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEA 516
E GP I +L+ +GI + D+KKL++AG TVESV Y+P+K L+ IKGISEAK DKI+ EA
Sbjct: 22 EHGPFPIEQLQASGIAALDVKKLKDAGLCTVESVVYSPRKDLLQIKGISEAKVDKII-EA 80
Query: 517 SKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCH 696
A++ H +R EIIQ+TTGS+ELD++L FR+GKTQLCH
Sbjct: 81 GN--------ASQLHAQRLEIIQVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCH 132
Query: 697 TLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGM 822
TL VTCQLP++Q GGEGK +YID EGTFRP+RLL +A R+ +
Sbjct: 133 TLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADRFAI 174
>UniRef50_Q96449 Cluster: Meiotic recombination protein DMC1
homolog; n=111; Eukaryota|Rep: Meiotic recombination
protein DMC1 homolog - Glycine max (Soybean)
Length = 345
Score = 161 bits (391), Expect = 2e-38
Identities = 83/173 (47%), Positives = 107/173 (61%)
Frame = +1
Query: 322 DEDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADK 501
D D DE + I KL GI +GD+KKL++AG +T + KK L IKG+SEAK DK
Sbjct: 21 DIDDDEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLMMHTKKNLTGIKGLSEAKVDK 80
Query: 502 ILAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGK 681
I A KLV G+ T ++ KR +I++TTGS+ LD LL FR+GK
Sbjct: 81 ICEAAEKLVNFGYITGSDALLKRKSVIRITTGSQALDELLGGGVETSAITEAFGEFRSGK 140
Query: 682 TQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
TQL HTL V+ QLP GG GK YIDTEGTFRP+R++ +A+R+GM+ AVL
Sbjct: 141 TQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVL 193
>UniRef50_O61128 Cluster: Dmc1 homolog; n=11; Eukaryota|Rep: Dmc1
homolog - Leishmania major
Length = 364
Score = 154 bits (373), Expect = 3e-36
Identities = 76/171 (44%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPM 534
+ +L +GI + DI KL++AG TV V +K LI IKG+SEAK DKI+ A ++ +
Sbjct: 49 VERLAEHGIGAADITKLKQAGIFTVPGVQMQCRKDLIQIKGLSEAKVDKIIEAARRVSEV 108
Query: 535 GFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXX-FRTGKTQLCHTLAVT 711
GF T + Q+R+ +++++TGS LD+LL FRTGKTQ+ HTL VT
Sbjct: 109 GFITGSSCLQQRSTLLRISTGSTALDQLLGGGGIESRSITEAFGEFRTGKTQIGHTLCVT 168
Query: 712 CQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKS 864
CQLP+E GG GK +Y+DTEGTFRPER+ +A+R+GM+ +VL + ++
Sbjct: 169 CQLPLEMGGGNGKAVYVDTEGTFRPERIRPIAERFGMDSNSVLDNILVARA 219
>UniRef50_Q7RD33 Cluster: DNA repair protein rhp51; n=1; Plasmodium
yoelii yoelii|Rep: DNA repair protein rhp51 - Plasmodium
yoelii yoelii
Length = 365
Score = 151 bits (365), Expect = 3e-35
Identities = 79/165 (47%), Positives = 101/165 (61%), Gaps = 1/165 (0%)
Frame = +1
Query: 349 QLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLV 528
Q I KL+ GI + DI KL+ +GY T+ S+ A KK L +KGISE K DKIL ASK+
Sbjct: 29 QEIEKLQDLGINAADINKLKGSGYCTILSLIQATKKELCNVKGISEVKVDKILEVASKIE 88
Query: 529 PMG-FTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLA 705
F T + QKR++++++TTGS LD+ L R GKTQ+CHTLA
Sbjct: 89 NCSAFITGNQLVQKRSKVLKITTGSSVLDKTLGGGFESMSITELFGENRCGKTQVCHTLA 148
Query: 706 VTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
VT QLP GG GK YIDTEGTFRPE++ +AQR+G+ VL
Sbjct: 149 VTAQLPKSMQGGNGKVCYIDTEGTFRPEKICKIAQRFGLNSEDVL 193
>UniRef50_A7ATP8 Cluster: Rad51 protein, putative; n=1; Babesia
bovis|Rep: Rad51 protein, putative - Babesia bovis
Length = 346
Score = 148 bits (359), Expect = 2e-34
Identities = 76/168 (45%), Positives = 99/168 (58%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
D G Q++ L G DI L+ AGY T++S+A K L+ +KG+SE K KI
Sbjct: 19 DTYASGLQVVECLLSKGFLQRDIDVLKAAGYVTLDSIAQVASKTLLEVKGLSEQKVAKIK 78
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
+L P TA E+ + R +I+ TTGS LD LL F TGKTQ
Sbjct: 79 EIVKELCPPDICTAAEYLECRLNLIKFTTGSTALDALLQGGIESGSITEIIGDFSTGKTQ 138
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGA 831
LCHTLA+T QLPIEQ+GGEGKC++IDT+ +FRPERL +A R+G+ A
Sbjct: 139 LCHTLAITSQLPIEQNGGEGKCLWIDTQNSFRPERLGPIANRFGLSHA 186
>UniRef50_A6R196 Cluster: DNA repair protein RAD51; n=1; Ajellomyces
capsulatus NAm1|Rep: DNA repair protein RAD51 -
Ajellomyces capsulatus NAm1
Length = 297
Score = 147 bits (356), Expect = 4e-34
Identities = 86/178 (48%), Positives = 104/178 (58%), Gaps = 1/178 (0%)
Frame = +1
Query: 346 PQLISKLEG-NGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASK 522
P ++ LEG NG+T+ DIK + + GYHT+ESVAY PK+ L IKGISE K A+K
Sbjct: 22 PTPLTALEGVNGLTARDIKLVIDGGYHTIESVAYTPKRMLEQIKGISEQK-------ATK 74
Query: 523 LVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTL 702
+ L GSK+LD LL FRTGK+Q+CHTL
Sbjct: 75 I--------------------LAEGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTL 114
Query: 703 AVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSXXPD 876
AVTCQLP + GGEGKC+YIDTEGTFRP RLLAVAQRYG+ G VL ++ D
Sbjct: 115 AVTCQLPFDMGGGEGKCLYIDTEGTFRPTRLLAVAQRYGLVGDEVLDNIAYARAYNSD 172
>UniRef50_Q14565 Cluster: Meiotic recombination protein DMC1/LIM15
homolog; n=36; Fungi/Metazoa group|Rep: Meiotic
recombination protein DMC1/LIM15 homolog - Homo sapiens
(Human)
Length = 340
Score = 142 bits (344), Expect = 1e-32
Identities = 75/172 (43%), Positives = 102/172 (59%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QL HTL VT QLP GK ++IDTE TFRP+RL +A R+ ++ AVL
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVL 185
>UniRef50_Q00YW7 Cluster: Meiotic recombination protein DMC1,
putative; n=2; Ostreococcus|Rep: Meiotic recombination
protein DMC1, putative - Ostreococcus tauri
Length = 371
Score = 141 bits (341), Expect = 2e-32
Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 4/174 (2%)
Frame = +1
Query: 352 LISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVP 531
LI +L+ GI++ D+ KL+ AG+ T+ + P+K ++ +KG S+AKADK+L A K++P
Sbjct: 53 LIDELQQAGISATDVNKLKAAGFSTIRQLVMFPRKNIVAVKGFSDAKADKVLESALKMLP 112
Query: 532 M----GFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHT 699
GF TA E ++R ++ +T G+ +D +L +R GKTQ+CHT
Sbjct: 113 ESESGGFITAAEDCERRKGVLHITCGAAAVDAILNGGFETRAITEIFGEWRCGKTQICHT 172
Query: 700 LAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICK 861
LAVT Q+PIE GG K +IDTE TFR +RL A+A R+G++ AVL + +
Sbjct: 173 LAVTTQMPIEMGGGCSKVAWIDTENTFRSDRLEAIADRFGLDRDAVLSNVMVAR 226
>UniRef50_P25453 Cluster: Meiotic recombination protein DMC1; n=39;
Eukaryota|Rep: Meiotic recombination protein DMC1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 334
Score = 138 bits (335), Expect = 1e-31
Identities = 69/162 (42%), Positives = 96/162 (59%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPM 534
+ +L+ GI + D++KL+ G +TV +V ++ L IKG+SE K +KI A K++ +
Sbjct: 19 VDELQNYGINASDLQKLKSGGIYTVNTVLSTTRRHLCKIKGLSEVKVEKIKEAAGKIIQV 78
Query: 535 GFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTC 714
GF AT R + L+TGSK+LD +L FR GKTQ+ HTL VT
Sbjct: 79 GFIPATVQLDIRQRVYSLSTGSKQLDSILGGGIMTMSITEVFGEFRCGKTQMSHTLCVTT 138
Query: 715 QLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QLP E GGEGK YIDTEGTFRPER+ +A+ Y ++ + L
Sbjct: 139 QLPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPESCL 180
>UniRef50_Q4S4D7 Cluster: Chromosome 2 SCAF14738, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14738, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 353
Score = 102 bits (245), Expect(2) = 4e-29
Identities = 53/118 (44%), Positives = 70/118 (59%)
Frame = +1
Query: 349 QLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLV 528
Q I L+ +GI DIKK++ AG TV+ + +K L IKG+SEAK DKI A K++
Sbjct: 5 QDIDLLQKHGINMADIKKMKSAGICTVKGIQMTTRKALCNIKGLSEAKVDKIKEAAGKML 64
Query: 529 PMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTL 702
+GF TA+E+ KR + +TTGS+E D+LL FRTGKTQL HTL
Sbjct: 65 NVGFQTASEYSAKRKHVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTL 122
Score = 49.2 bits (112), Expect(2) = 4e-29
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +1
Query: 703 AVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
AVT QLP + GK ++IDTE TFRP+RL +A R+ ++ AVL
Sbjct: 153 AVTSQLPGDDGYSGGKVIFIDTENTFRPDRLRDIADRFNVDQEAVL 198
>UniRef50_UPI00005020FA Cluster: similar to RAD51 homolog protein
isoform 1 (LOC364752), mRNA; n=2; Mammalia|Rep: similar
to RAD51 homolog protein isoform 1 (LOC364752), mRNA -
Rattus norvegicus
Length = 313
Score = 124 bits (300), Expect = 2e-27
Identities = 82/161 (50%), Positives = 97/161 (60%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
E+ + GPQLIS +E G D+KKLEEA +H+VE+VAYAPK+ LI I +SEAKADKI
Sbjct: 15 EEEESFGPQLISWVEQCGNVK-DVKKLEEACFHSVEAVAYAPKE-LIYIMSVSEAKADKI 72
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
L EA+KLVPMGF TA TTG++ELD+LL F+T KT
Sbjct: 73 LTEAAKLVPMGFITAL---VSPTLFQNHTTGTEELDKLLQGRMETGSTIEIFGAFQTRKT 129
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVA 807
Q+CHTLAVT Q Y DTE TFR E LLAVA
Sbjct: 130 QICHTLAVTWQ-------------YNDTESTFRLELLLAVA 157
>UniRef50_A2DHG2 Cluster: DNA repair protein RAD51 homolog,
putative; n=1; Trichomonas vaginalis G3|Rep: DNA repair
protein RAD51 homolog, putative - Trichomonas vaginalis
G3
Length = 115
Score = 117 bits (282), Expect = 4e-25
Identities = 54/86 (62%), Positives = 71/86 (82%)
Frame = +1
Query: 364 LEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFT 543
LE GI +GDIKKL+E GY+TVES+A+ KK L+ +KGISEAKADKI+A A+ LVPMGF
Sbjct: 20 LEQQGIAAGDIKKLQEGGYNTVESIAFTTKKLLVAVKGISEAKADKIMAAAAALVPMGFA 79
Query: 544 TATEFHQKRAEIIQLTTGSKELDRLL 621
+AT+++Q R E++ L+TGS ELD+LL
Sbjct: 80 SATDYNQIRKEMVYLSTGSSELDKLL 105
>UniRef50_Q8ZYR9 Cluster: DNA repair and recombination protein radA;
n=19; Archaea|Rep: DNA repair and recombination protein
radA - Pyrobaculum aerophilum
Length = 333
Score = 116 bits (279), Expect = 8e-25
Identities = 65/163 (39%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPM 534
+ +LEG G +G KL+E GY+TV +A+A K L I G +E +A +I+ A K++ +
Sbjct: 27 VEELEGIGRVTG--AKLKERGYYTVRDIAFASVKELAEIIG-NEDRAQQIIEAARKMLGL 83
Query: 535 -GFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVT 711
F +A E +++R +I +++TG + LD LL F +GKTQLCH LAV
Sbjct: 84 HSFISALEVYERRKKIRRISTGVRSLDELLGGGIETRAVTEIVGEFGSGKTQLCHQLAVM 143
Query: 712 CQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QLP E+ G K +YIDTE TFRPER++ +A+ G++ L
Sbjct: 144 VQLPEERGGLGAKAIYIDTENTFRPERIMQIAKARGLDSDQAL 186
>UniRef50_Q55075 Cluster: DNA repair and recombination protein radA;
n=12; Archaea|Rep: DNA repair and recombination protein
radA - Sulfolobus solfataricus
Length = 324
Score = 111 bits (268), Expect = 2e-23
Identities = 62/150 (41%), Positives = 88/150 (58%)
Frame = +1
Query: 376 GITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFTTATE 555
GI+ I KL EAGY ++E++A A + L GI + A KI+ EA + + F TA E
Sbjct: 19 GISQTVINKLIEAGYSSLETLAVASPQDLSVAAGIPLSTAQKIIKEARDALDIRFKTALE 78
Query: 556 FHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQS 735
++R + +++TGS+ LD LL F +GKTQLCH L+V QLP E+
Sbjct: 79 VKKERMNVKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKG 138
Query: 736 GGEGKCMYIDTEGTFRPERLLAVAQRYGME 825
G GK +YIDTEGTFR ER+ +A+ G++
Sbjct: 139 GLSGKAVYIDTEGTFRWERIENMAKALGLD 168
>UniRef50_A3KGH9 Cluster: RAD51 homolog; n=13; Eukaryota|Rep: RAD51
homolog - Mus musculus (Mouse)
Length = 236
Score = 110 bits (265), Expect = 4e-23
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = +1
Query: 667 FRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXX 846
FRTGKTQ+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL
Sbjct: 8 FRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDN 67
Query: 847 CCICKSXXPD 876
+ D
Sbjct: 68 VAYARGFNTD 77
>UniRef50_Q3LW29 Cluster: DNA recombination and repair protein; n=1;
Bigelowiella natans|Rep: DNA recombination and repair
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 331
Score = 110 bits (264), Expect = 5e-23
Identities = 57/154 (37%), Positives = 91/154 (59%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPM 534
+ +L+ GI+ DI+KL + G T+ S+A A KK L +IKG+++ KA+KIL+ A K VP+
Sbjct: 16 LMELQKLGISDLDIQKLIDNGIFTINSLAKASKKELYSIKGLNDRKAEKILSLAKKRVPV 75
Query: 535 GFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTC 714
GF+T + + + + ++T +K +D LL +TGKTQ CH L V+
Sbjct: 76 GFSTLKNYLKTKKQQFHISTLNKTIDNLLEGGIESSSVTEIFGESKTGKTQFCHILCVSA 135
Query: 715 QLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRY 816
+ K +YIDTEG FRPERL+ +++++
Sbjct: 136 MVDNYSFVQTKKVIYIDTEGNFRPERLIEISEKF 169
>UniRef50_UPI00006CB33C Cluster: hypothetical protein
TTHERM_00459230; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00459230 - Tetrahymena
thermophila SB210
Length = 356
Score = 106 bits (254), Expect = 9e-22
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Frame = +1
Query: 352 LISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKAD-------KILA 510
L+ L G+ + +I+KL++ G +++S+ K+ L+ I GI + KAD +ILA
Sbjct: 24 LVEMLATEGVNNNEIQKLKKNGILSLKSLVMNTKRDLVNIYGIPDNKADSYVKKASEILA 83
Query: 511 --EASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
E S+L F T Q+R++I +++TGSK LD +L +R+GKT
Sbjct: 84 RSENSRLFSSEFVLGTTVLQRRSQIRRISTGSKALDDILNGGIESQSITEFYGEYRSGKT 143
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
Q+ HT V Q + GK +YIDTEGTFRPER+ +A YGMEG L
Sbjct: 144 QIAHTACVLAQSQ-DHCQSPGKVLYIDTEGTFRPERICQIASHYGMEGEYAL 194
>UniRef50_Q49593 Cluster: DNA repair and recombination protein radA;
n=11; Archaea|Rep: DNA repair and recombination protein
radA - Methanococcus jannaschii
Length = 352
Score = 103 bits (247), Expect = 6e-21
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPM 534
+++L G G T+ + KL+EAGY +A A L I GISE A +I+ A +L +
Sbjct: 36 LTQLPGVGPTTAE--KLKEAGYTDFMKIATASIGELTEIDGISEKAAARIIEAARELCNL 93
Query: 535 GFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTC 714
GF + TE +R I +L+TGSK LD +L F +GKTQ+ H V
Sbjct: 94 GFKSGTEVLSQRKNIWKLSTGSKNLDEILGGGLESQSVTEFAGMFGSGKTQIAHQACVNL 153
Query: 715 QLP---------IEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
Q P ++ E K +YIDTEGTFRPER++ +A+ G++G VL + ++
Sbjct: 154 QCPERIVADDAIKDEILNEPKAVYIDTEGTFRPERIVQMAEALGLDGNEVLNNIFVARAY 213
Query: 868 XPDIR 882
D++
Sbjct: 214 NSDMQ 218
>UniRef50_O93748 Cluster: DNA repair and recombination protein radA;
n=2; Thermoprotei|Rep: DNA repair and recombination
protein radA - Cenarchaeum symbiosum
Length = 398
Score = 100 bits (240), Expect = 4e-20
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASK---- 522
+S LEG G + KKLE++G H++ + L I +S +KI+ A K
Sbjct: 8 LSDLEGVGPVTK--KKLEDSGVHSMMDLVVRGPVELGEISSMSSEICEKIVTIARKRLAE 65
Query: 523 --LVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCH 696
+ F + +E +++R I +TTG+ LD LL F +GKTQ CH
Sbjct: 66 TGAITKDFASGSEIYKRRQSIGMITTGTDALDALLGGGIETQAITEVFGEFGSGKTQFCH 125
Query: 697 TLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKS 864
T+ VT Q P E+ G G MYIDTEGTFRPER++ +A+ M+ A +L + ++
Sbjct: 126 TMCVTTQKPKEEGGLGGGVMYIDTEGTFRPERVVTIAKANNMDPAKLLDGIIVARA 181
>UniRef50_Q8C610 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4930447F14 product:disrupted
meiotic cDNA 1 homolog, full insert sequence; n=32;
Eukaryota|Rep: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4930447F14 product:disrupted
meiotic cDNA 1 homolog, full insert sequence - Mus
musculus (Mouse)
Length = 285
Score = 98.3 bits (234), Expect = 2e-19
Identities = 51/134 (38%), Positives = 76/134 (56%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK +KI
Sbjct: 14 QDDEESLFQDIDLLQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVEKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA ++ ++R + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFQYSERRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPI 726
QL HTL Q+ +
Sbjct: 134 QLSHTLCGEHQMEL 147
>UniRef50_A1RYZ3 Cluster: Rad51-like; n=1; Thermofilum pendens Hrk
5|Rep: Rad51-like - Thermofilum pendens (strain Hrk 5)
Length = 315
Score = 98.3 bits (234), Expect = 2e-19
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Frame = +1
Query: 376 GITSGDIKKLEEAGYHTVES-VAYAPKKWLITIKGISEAKADKILAEASKLV--PMGFTT 546
GI I +L+ AG TVE V Y P++ L + GI +A +++ A +L +
Sbjct: 13 GIGRVTISRLKSAGIETVEDLVLYNPEE-LEELAGIDFERALRLVRTARRLAGWEVRAVR 71
Query: 547 ATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPI 726
E+ + ++ LTTG K LD LL + +GKTQLCH L+VT QLP
Sbjct: 72 GDEYASQLSQRESLTTGVKALDELLEGGLVTQEIYEFAGEYGSGKTQLCHQLSVTAQLPP 131
Query: 727 EQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGA 831
+ G GK +Y+DTEGTF P R+ +A+R+G+EGA
Sbjct: 132 SRGGLGGKVVYVDTEGTFSPSRIERIAERFGVEGA 166
>UniRef50_Q8PZN5 Cluster: DNA repair and recombination protein radA;
n=21; Archaea|Rep: DNA repair and recombination protein
radA - Methanosarcina mazei (Methanosarcina frisia)
Length = 325
Score = 94.3 bits (224), Expect = 4e-18
Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Frame = +1
Query: 376 GITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMG-FTTAT 552
G+ +KL+EAG++T+E+VA A L T I E+ A KI+ A + +G F T
Sbjct: 11 GVGPATAEKLKEAGFNTIEAVAVASPSELATTAEIGESTAAKIINAARQAADIGGFETGD 70
Query: 553 EFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQ 732
++R + +LTTG E D ++ F +GKTQ+ H LAV Q+ E
Sbjct: 71 LVLERRKLVGKLTTGCTEFDEMMGGGIETQAITELYGEFGSGKTQVAHQLAVNVQMDREH 130
Query: 733 SGGEGKCMYIDTEGTFRPERLL----AVAQRYGME 825
G G + IDTE TFRPER+ ++++YGME
Sbjct: 131 GGLGGSVIIIDTENTFRPERITQMVNGLSEKYGME 165
>UniRef50_A3KGI2 Cluster: RAD51 homolog; n=1; Mus musculus|Rep:
RAD51 homolog - Mus musculus (Mouse)
Length = 178
Score = 90.6 bits (215), Expect = 5e-17
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAGYHTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKIL 75
Score = 80.6 bits (190), Expect = 5e-14
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = +1
Query: 511 EASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
EA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 120 EAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 178
>UniRef50_Q8TVF0 Cluster: RadA recombinase; n=1; Methanopyrus
kandleri|Rep: RadA recombinase - Methanopyrus kandleri
Length = 317
Score = 90.6 bits (215), Expect = 5e-17
Identities = 54/149 (36%), Positives = 75/149 (50%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRA 573
+KKLEE G TVE YA K+L + G+SE + I E + + F T + +KR
Sbjct: 17 VKKLEEKGIVTVEDFIYADPKYLSEVTGMSERDVEDIQEELRN-IDVEFETLEKLERKRR 75
Query: 574 EIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKC 753
I TTGS LD +L F +GK+Q+ L V QLP E+ G E K
Sbjct: 76 RI---TTGSSALDEILGGGVPCGELTEFAGPFGSGKSQIVFQLCVNVQLPEEEGGLESKA 132
Query: 754 MYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
++IDTEGT P R+ +A+ G++ L
Sbjct: 133 IFIDTEGTVSPGRIKGMAEALGLDPGEAL 161
>UniRef50_UPI0000D55904 Cluster: PREDICTED: similar to Meiotic
recombination protein DMC1/LIM15 homolog; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Meiotic
recombination protein DMC1/LIM15 homolog - Tribolium
castaneum
Length = 356
Score = 90.2 bits (214), Expect = 6e-17
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Frame = +1
Query: 349 QLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKL- 525
Q I L +G+ DI+++ + G +TV+ + L+ +K + +K KI +
Sbjct: 33 QDIYMLTEHGVPLPDIEEMRKIGINTVKGLQMTTTDKLLALKSFNPSKVSKIQEICGNIS 92
Query: 526 VPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLA 705
F TA E + ++ +++TGS LD+LL +GKTQ+ HTL
Sbjct: 93 FSNRFMTAFEVSEACKQVFKISTGSANLDKLLGGGVESMSITQVFGEAGSGKTQIAHTLC 152
Query: 706 VTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
VT Q+P E G GK M+IDTE +FRP R+ +A+R+ + +VL
Sbjct: 153 VTTQIPTEDYSG-GKVMFIDTERSFRPNRIRQIARRFHLSEDSVL 196
>UniRef50_Q9HMM4 Cluster: DNA repair and recombination protein radA;
n=160; Halobacteriaceae|Rep: DNA repair and
recombination protein radA - Halobacterium salinarium
(Halobacterium halobium)
Length = 343
Score = 78.2 bits (184), Expect = 3e-13
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = +1
Query: 376 GITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMG-FTTAT 552
G+ +KL + G+ +S+A A L I E+ A ++ A + +G F T
Sbjct: 11 GVGPATAEKLRDNGFDAFQSLAVANSAELSNTADIGESTAADVIQAAREAADVGGFETGA 70
Query: 553 EFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQ 732
++R +I +LT E+D LL F GK+Q+ H LAV QLP E
Sbjct: 71 TVLERREQIGKLTWNIPEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPTEY 130
Query: 733 SGGEGKCMYIDTEGTFRPERL 795
G G+ ++ID+E TFRPER+
Sbjct: 131 GGLHGRAVFIDSEDTFRPERI 151
>UniRef50_A1RY65 Cluster: Rad51-like; n=1; Thermofilum pendens Hrk
5|Rep: Rad51-like - Thermofilum pendens (strain Hrk 5)
Length = 250
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = +1
Query: 574 EIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKC 753
E +++TG + LD LL F GKTQ+CH L+V QLP ++ G +
Sbjct: 26 ESARISTGVRSLDDLLEGGIEVGSITEFIGEFGAGKTQICHQLSVMVQLPKDKGGLNARA 85
Query: 754 MYIDTEGTFRPERLLAVAQRYGME 825
+Y+DTEGTFRPER++ +A+ G++
Sbjct: 86 LYVDTEGTFRPERIVQIARARGLD 109
>UniRef50_Q5JET4 Cluster: DNA repair and recombination protein radA
[Contains: Pko radA intein]; n=12; Archaea|Rep: DNA
repair and recombination protein radA [Contains: Pko
radA intein] - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 836
Score = 62.5 bits (145), Expect = 1e-08
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 355 ISKLEG-NGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVP 531
IS LE G+ +KL EAGY T+E++A A L I GISE A KI+ A +
Sbjct: 39 ISALEDLPGVGPATAEKLREAGYDTIEAIAVASPLELKEIAGISEGAALKIIQAAREAAN 98
Query: 532 MG-FTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGK 681
+G F A E+ ++R I +++TGSK LD+LL F +GK
Sbjct: 99 IGTFMRADEYMKRRTTIGKISTGSKALDKLLGGGIETQAITEVFGEFGSGK 149
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +1
Query: 682 TQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICK 861
TQL HTLAV Q P E+ G G ++IDTE TFRPER+ +A+ G++ L + +
Sbjct: 632 TQLAHTLAVMVQKPPEEGGLGGSVIWIDTENTFRPERIKQIAENRGLDPEETLKNIYVAR 691
Query: 862 S 864
+
Sbjct: 692 A 692
>UniRef50_O58001 Cluster: DNA repair and recombination protein radA
[Contains: Pho radA intein]; n=3; Pyrococcus|Rep: DNA
repair and recombination protein radA [Contains: Pho
radA intein] - Pyrococcus horikoshii
Length = 529
Score = 61.7 bits (143), Expect = 2e-08
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +1
Query: 376 GITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMG-FTTAT 552
G+ +KL EAG+ T+E++A A L + GISE A KI+ A K +G F A
Sbjct: 50 GVGPATAEKLREAGFDTLEAIAVASPIELKEVAGISEGAALKIIQAARKAANLGTFMRAD 109
Query: 553 EFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGK 681
E+ +KR I +++TGSK LD+LL F +GK
Sbjct: 110 EYLKKRESIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGK 152
Score = 60.1 bits (139), Expect = 7e-08
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +1
Query: 682 TQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICK 861
TQL HTLAV QLP E+ G G ++IDTE TFRPER+ +A+ G++ VL + +
Sbjct: 325 TQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIREIAKNRGLDPDEVLKHIYVAR 384
Query: 862 S 864
+
Sbjct: 385 A 385
>UniRef50_Q4UAC7 Cluster: Meiotic recombination (DMC1-like) protein,
putative; n=1; Theileria annulata|Rep: Meiotic
recombination (DMC1-like) protein, putative - Theileria
annulata
Length = 409
Score = 60.5 bits (140), Expect = 6e-08
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKL-VP 531
I +LE GI DI KL+ AG T+ V KK L IKG++E K +KI ASKL +
Sbjct: 28 IERLEEMGINVSDINKLKSAGICTILGVIQTTKKDLCNIKGLTEMKVEKISDSASKLEIT 87
Query: 532 MGFTTATEFHQKRAEIIQLTTG 597
F +A + +Q R I+++ TG
Sbjct: 88 NSFISANQLYQLRKSILKIDTG 109
>UniRef50_Q7ZTX4 Cluster: Zgc:56581; n=6; Euteleostomi|Rep:
Zgc:56581 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 373
Score = 60.1 bits (139), Expect = 7e-08
Identities = 43/150 (28%), Positives = 66/150 (44%)
Frame = +1
Query: 361 KLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGF 540
KL +G+++ ++L+ T + V + L + G+S A + SK
Sbjct: 5 KLRRSGVSADLCERLKRHQLETCQDVLSVTQVELSRLAGLSYPAALNLQRLVSKACAPAV 64
Query: 541 TTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQL 720
TA + +++ E+ +T LDRLL GKTQLC L+V L
Sbjct: 65 ITALDLWKRKEELC-FSTSLPALDRLLHGGLPRGALTEVTGPSGCGKTQLCMMLSVLATL 123
Query: 721 PIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
P G + +YIDTE F ERL+ +AQ
Sbjct: 124 PKSLGGLDSGVIYIDTESAFSAERLVEMAQ 153
>UniRef50_Q8GXF0 Cluster: DNA repair protein RAD51 homolog 3; n=5;
Magnoliophyta|Rep: DNA repair protein RAD51 homolog 3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 363
Score = 59.7 bits (138), Expect = 1e-07
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Frame = +1
Query: 400 KLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEA-------SKLVPMGFTTATEF 558
KL AGY + S+A L I+E +A +IL A S+ + G A +
Sbjct: 36 KLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSCCNGSRSLINGAKNAWDM 95
Query: 559 HQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+ + ++TT +LD +L GKTQ+ L+V Q+P E G
Sbjct: 96 LHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGG 155
Query: 739 GEGKCMYIDTEGTFRPERLLAVAQ 810
GK +YIDTEG+F ER L +A+
Sbjct: 156 LGGKAIYIDTEGSFMVERALQIAE 179
>UniRef50_UPI0000586FDE Cluster: PREDICTED: similar to
RAD51L2/RAD51C protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RAD51L2/RAD51C
protein - Strongylocentrotus purpuratus
Length = 425
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/89 (37%), Positives = 43/89 (48%)
Frame = +1
Query: 544 TATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLP 723
TA E QK + + T +ELD +L GKTQ C L V Q+P
Sbjct: 109 TAFEMLQKEQSLPPIITFCEELDEMLGGGVPMCKITEICGAPGVGKTQTCIQLCVDVQIP 168
Query: 724 IEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
G EG+ +YIDTEG+F P+R +AQ
Sbjct: 169 ASLGGVEGEAVYIDTEGSFIPQRAWGIAQ 197
>UniRef50_Q4Q3T8 Cluster: Recombinase Rad51, putative; n=3;
Leishmania|Rep: Recombinase Rad51, putative - Leishmania
major
Length = 687
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 553 EFHQKRAE--IIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPI 726
EF ++A+ +TT S ELD +L GKTQL LAV+C +P+
Sbjct: 209 EFQARQAQGFSTHVTTFSGELDGVLGGGVPVGGVTEISGPPGVGKTQLLMQLAVSCAMPV 268
Query: 727 EQSGGEGKCMYIDTEGTFRPERLLAVA 807
E G G C+++DTEG+F ERL +A
Sbjct: 269 EFGGMGGACLFVDTEGSFVAERLEQMA 295
>UniRef50_Q386Q5 Cluster: Recombinase Rad51, putative; n=1;
Trypanosoma brucei|Rep: Recombinase Rad51, putative -
Trypanosoma brucei
Length = 507
Score = 55.6 bits (128), Expect = 2e-06
Identities = 32/77 (41%), Positives = 39/77 (50%)
Frame = +1
Query: 577 IIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCM 756
I +TT + LD LL GKTQL LAV C LP E G +G C+
Sbjct: 103 IENVTTLCRSLDILLGGGLQVGTLTEICGPPGVGKTQLSMQLAVNCVLPKELGGLQGGCL 162
Query: 757 YIDTEGTFRPERLLAVA 807
+IDTEG+F PER +A
Sbjct: 163 FIDTEGSFLPERFREIA 179
>UniRef50_Q54QU4 Cluster: AAA ATPase domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: AAA ATPase
domain-containing protein - Dictyostelium discoideum AX4
Length = 564
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/84 (35%), Positives = 42/84 (50%)
Frame = +1
Query: 544 TATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLP 723
T+ E + + I+L+TG K +D+ L +GKTQLC L++ QLP
Sbjct: 153 TSLELEKLQISSIKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQLSLQVQLP 212
Query: 724 IEQSGGEGKCMYIDTEGTFRPERL 795
E G G C+YI TE F +RL
Sbjct: 213 FEMGGLNGACLYITTEPPFPTKRL 236
>UniRef50_Q4E2R1 Cluster: DNA recombination and repair protein
RAD51, putative; n=1; Trypanosoma cruzi|Rep: DNA
recombination and repair protein RAD51, putative -
Trypanosoma cruzi
Length = 492
Score = 54.4 bits (125), Expect = 4e-06
Identities = 30/81 (37%), Positives = 40/81 (49%)
Frame = +1
Query: 583 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 762
++TT + +D LL GKTQ+ LAV C LP E G G C++I
Sbjct: 122 RVTTFCRGIDTLLGGGLPVGAVSEVCGAPGVGKTQMLMQLAVNCLLPRELGGLHGSCLFI 181
Query: 763 DTEGTFRPERLLAVAQRYGME 825
DTEG+F PER +A M+
Sbjct: 182 DTEGSFVPERFREIAHAAVMQ 202
>UniRef50_UPI0000E47207 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 355
Score = 52.0 bits (119), Expect = 2e-05
Identities = 46/150 (30%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
Frame = +1
Query: 364 LEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPM--G 537
+E + + L++A + ESV + L +S IL S+ V
Sbjct: 1 MENLSVNPRILASLKKANLRSFESVLHLSPADLGRCTKLSSRDVSIILKAVSEEVYKIKN 60
Query: 538 FTTATEF---HQK-RAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLA 705
T T F HQ+ R E LTTG LD L GKTQLC L
Sbjct: 61 ITALTLFKQSHQEDRKEPTHLTTGCPILDEFLHGGILVKGITEIAGQSAAGKTQLCLQLC 120
Query: 706 VTCQLPIEQSGGEGKCMYIDTEGTFRPERL 795
+T QLP++Q G +YI TE F +RL
Sbjct: 121 LTAQLPVQQGGLANGVVYICTEDVFPSKRL 150
>UniRef50_Q93YY9 Cluster: RAD51C protein; n=1; Chlamydomonas
reinhardtii|Rep: RAD51C protein - Chlamydomonas
reinhardtii
Length = 352
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Frame = +1
Query: 535 GFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTC 714
G +A + A ++ + +++LD LL GKTQL LAV
Sbjct: 76 GTVSAADLLVAAAATPRIISMARDLDALLGGGVAAGQVTEFCGVPGVGKTQLGMQLAVNV 135
Query: 715 QLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
Q+P SG EG+ +YIDTEG+F ER +A+
Sbjct: 136 QIPRSLSGPEGQAVYIDTEGSFMAERCADIAE 167
>UniRef50_Q657A2 Cluster: DNA repair protein radA (RadA)-like; n=3;
Oryza sativa|Rep: DNA repair protein radA (RadA)-like -
Oryza sativa subsp. japonica (Rice)
Length = 309
Score = 50.8 bits (116), Expect = 5e-05
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQL LA+ Q+P+E G GK +YIDTEG+F ER+ +A+
Sbjct: 80 GKTQLGIQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAE 124
>UniRef50_A4S2Y8 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 351
Score = 48.8 bits (111), Expect = 2e-04
Identities = 34/137 (24%), Positives = 57/137 (41%)
Frame = +1
Query: 400 KLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEI 579
KLE G T E Y ++ + +S +A + + +K V TTA + +R++
Sbjct: 21 KLESRGCRTAEDALYRAPLDVVELADVSMHRARQFIISVAKAVAPTPTTALDA-LRRSQY 79
Query: 580 IQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMY 759
+ L +++D+ L GKTQLC + P G +G +Y
Sbjct: 80 VPLVI--EDVDKALGGGLRVGAVTEVVGAAGAGKTQLCLAACASAAAPARVGGRDGGVIY 137
Query: 760 IDTEGTFRPERLLAVAQ 810
+D E F RL +A+
Sbjct: 138 VDAERKFSGARLAEIAR 154
>UniRef50_Q8SZ30 Cluster: RE19845p; n=2; Sophophora|Rep: RE19845p -
Drosophila melanogaster (Fruit fly)
Length = 270
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 583 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 762
++ TG K LD TGKTQ+C L + Q+P G EG ++I
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 763 DTEGTFRPERLLAVA 807
DT F P+RL+ +A
Sbjct: 105 DTRQDFHPDRLMGLA 119
>UniRef50_O15315 Cluster: DNA repair protein RAD51 homolog 2; n=27;
Deuterostomia|Rep: DNA repair protein RAD51 homolog 2 -
Homo sapiens (Human)
Length = 384
Score = 47.6 bits (108), Expect = 4e-04
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQ---LTTGSKELDRLLXXX 630
L+ + G+S ++L S+ TA +R+ L+T LD L
Sbjct: 38 LMKVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGG 97
Query: 631 XXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQ C +++ LP G EG +YIDTE F ERL+ +A+
Sbjct: 98 VACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAE 157
>UniRef50_UPI0000F2B25B Cluster: PREDICTED: similar to RAD51-like 1
(S. cerevisiae),; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to RAD51-like 1 (S. cerevisiae), -
Monodelphis domestica
Length = 396
Score = 47.2 bits (107), Expect = 6e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQ C ++V LP G EG +YIDTE F ERL+ +A+
Sbjct: 113 GKTQFCMMMSVLATLPTGMGGLEGAVIYIDTESAFSAERLIRIAE 157
>UniRef50_Q6FIZ6 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57; n=2; Saccharomycetales|Rep:
Similar to sp|P25301 Saccharomyces cerevisiae YDR004w
RAD57 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 466
Score = 46.8 bits (106), Expect = 7e-04
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +1
Query: 583 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 762
Q TTG +D +L TGK+QL L ++ QLPI + G KC++I
Sbjct: 85 QFTTGDLGIDEVLGGGISTNCITEIFGESSTGKSQLLMQLCLSVQLPISEGGLNAKCVFI 144
Query: 763 DTEGTFRPERLLAVAQ 810
TEG RL + +
Sbjct: 145 TTEGDLPTNRLAGMIE 160
>UniRef50_Q6CMV0 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57 DNA repair protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P25301
Saccharomyces cerevisiae YDR004w RAD57 DNA repair
protein - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 480
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = +1
Query: 589 TTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDT 768
TTG+ LD+LL TGK+QL LA++ QLP + +G G+ +YI T
Sbjct: 90 TTGNLGLDKLLGGGIYSKGITEIFGESSTGKSQLLLQLALSVQLPEDMNGLNGQSVYITT 149
Query: 769 EGTFRPERLLAVAQR 813
EG RL ++ ++
Sbjct: 150 EGDLPTRRLKSIIEQ 164
>UniRef50_Q9V2F6 Cluster: DNA repair and recombination protein radB;
n=5; Thermococcaceae|Rep: DNA repair and recombination
protein radB - Pyrococcus abyssi
Length = 239
Score = 45.6 bits (103), Expect = 0.002
Identities = 33/85 (38%), Positives = 41/85 (48%)
Frame = +1
Query: 571 AEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGK 750
A+ + LTTG K LD LL F TGKT T A+ L EGK
Sbjct: 8 AKGMTLTTGVKGLDELLGGGVARGVILQVYGPFATGKT----TFAMQVGLL-----NEGK 58
Query: 751 CMYIDTEGTFRPERLLAVAQRYGME 825
Y+DTEG F PERL +A+ G++
Sbjct: 59 VAYVDTEGGFSPERLKQMAESRGLD 83
>UniRef50_O43502 Cluster: DNA repair protein RAD51 homolog 3; n=32;
Euteleostomi|Rep: DNA repair protein RAD51 homolog 3 -
Homo sapiens (Human)
Length = 376
Score = 45.6 bits (103), Expect = 0.002
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 400 KLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILA----EASKLVPMGFTTATEFHQK 567
KL AG+ T E + L GIS+A+A + L E P + +E H+K
Sbjct: 26 KLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPR-YAGTSESHKK 84
Query: 568 --RAEIIQ-------LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQL 720
E+++ + T LD +L GKTQLC LAV Q+
Sbjct: 85 CTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQI 144
Query: 721 PIEQSGGEGKCMYIDTEGTFRPERLLAVA 807
P G G+ ++IDTEG+F +R++ +A
Sbjct: 145 PECFGGVAGEAVFIDTEGSFMVDRVVDLA 173
>UniRef50_A0NCA9 Cluster: ENSANGP00000029732; n=2; Culicidae|Rep:
ENSANGP00000029732 - Anopheles gambiae str. PEST
Length = 290
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
+GKTQLC LAV Q+P + G +G+ +Y+DT F P+R+ +A+
Sbjct: 48 SGKTQLCLQLAVNVQIPQQLGGLQGRAVYLDTNYGFFPQRVQEMAK 93
>UniRef50_Q8ZTI5 Cluster: DNA repair protein radA; n=5;
Pyrobaculum|Rep: DNA repair protein radA - Pyrobaculum
aerophilum
Length = 311
Score = 44.8 bits (101), Expect = 0.003
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Frame = +1
Query: 376 GITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFT-TAT 552
G+ ++KL E G +VE +A + L+ GI +A K+L +A + V T
Sbjct: 13 GVGPKTLEKLRELGVTSVEHLAEFTVEELVEA-GIEYDRAVKLLQQALQRVGAARPLTLR 71
Query: 553 EFHQKRAEIIQLTTGSKELD-RLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIE 729
E Q++ + + TG E D + F GK+ L H +V
Sbjct: 72 EMRQRQVKAFK--TGVAEFDEKTPWRGIREAFIYEFAGEFGAGKSMLAHQASVAAL---- 125
Query: 730 QSGGEGKCMYIDTEGTFRPERLLAVAQRYGME 825
+ G + +YIDTEGTF + AVA+R+ ++
Sbjct: 126 REGFTERVVYIDTEGTFNEALIEAVARRFELD 157
>UniRef50_UPI0000E249BA Cluster: PREDICTED: RAD51 homolog C; n=1;
Pan troglodytes|Rep: PREDICTED: RAD51 homolog C - Pan
troglodytes
Length = 461
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVA 807
GKTQLC LAV Q+P G G+ ++IDTEG+F +R++ +A
Sbjct: 175 GKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLA 218
>UniRef50_Q6Q241 Cluster: Putative Rad51B protein; n=1;
Chlamydomonas reinhardtii|Rep: Putative Rad51B protein -
Chlamydomonas reinhardtii
Length = 392
Score = 44.0 bits (99), Expect = 0.005
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEI---IQLTTGSKELDRLLXXX 630
L+ + G++ A ++LA+ S + ++TA + ++A L TG LD L
Sbjct: 38 LMELLGLTWTAAHQLLADVSAQISPPYSTAYDVFTQQATAEAPAPLRTGLPTLDGALRLG 97
Query: 631 XXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGK-CMYIDTEGTFRPERLLAVA 807
GK+QL H LA+ +P E GG G +YIDTE F RL +
Sbjct: 98 VPVGSITELVGPGGVGKSQLSHMLALAVAMP-EALGGLGAGVVYIDTERKFSAPRLQEMV 156
Query: 808 QRYGMEGAA 834
E AA
Sbjct: 157 HARVAEAAA 165
>UniRef50_Q00XV2 Cluster: RAD51-like protein 2; n=2;
Ostreococcus|Rep: RAD51-like protein 2 - Ostreococcus
tauri
Length = 570
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVA 807
GKTQ+C + V+ P G +G+ +Y+DTEG+F +R + VA
Sbjct: 131 GKTQMCTQVCVSASTPEAFGGTDGEAVYVDTEGSFMADRAMDVA 174
>UniRef50_UPI0000DB74C1 Cluster: PREDICTED: similar to DNA-repair
protein XRCC3 (X-ray repair cross-complementing protein
3); n=1; Apis mellifera|Rep: PREDICTED: similar to
DNA-repair protein XRCC3 (X-ray repair
cross-complementing protein 3) - Apis mellifera
Length = 169
Score = 43.2 bits (97), Expect = 0.009
Identities = 27/76 (35%), Positives = 33/76 (43%)
Frame = +1
Query: 586 LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYID 765
LTTG + D LL TGKTQL L +T QLP + G +YI
Sbjct: 18 LTTGCSKFDTLLQGGITNRGITQIYGAASTGKTQLALQLCLTVQLPKTEGGLAAGAIYIC 77
Query: 766 TEGTFRPERLLAVAQR 813
TE F RL + Q+
Sbjct: 78 TESIFPSRRLQELIQK 93
>UniRef50_Q55WG1 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 324
Score = 41.5 bits (93), Expect = 0.028
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLIT-IKGISEAKADKILAEASKLVPMGFTTATEFHQKR 570
I +LE AG T ES+ + + +I+ I ++ + + +++ +L A++
Sbjct: 18 IPELESAGIKTTESIIFTHQPTIISSISTLNYQQLEALVSYCIRLTAGKSQIASDIDNYE 77
Query: 571 AEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGK 750
L G K LD LL + GK+ LA+ L + E
Sbjct: 78 VTGPWLGFGVKGLDELLDGWEGVGVLEIAGPR-KVGKS----LLALHAALNVLIDNPEAI 132
Query: 751 CMYIDTEGTFRPERLLAVAQRYGMEGA 831
C ++DTEGTF PER V + + +E A
Sbjct: 133 CTWMDTEGTFAPERAGKVLEAWKIENA 159
>UniRef50_P25301 Cluster: DNA repair protein RAD57; n=2;
Saccharomyces cerevisiae|Rep: DNA repair protein RAD57 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 460
Score = 41.5 bits (93), Expect = 0.028
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = +1
Query: 589 TTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDT 768
TT +D LL TGK+QL LA++ QL G GKC+YI T
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 769 EGTFRPERL 795
EG +RL
Sbjct: 161 EGDLPTQRL 169
>UniRef50_Q9Z8M2 Cluster: N Utilization Protein A; n=9;
Chlamydiales|Rep: N Utilization Protein A - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 434
Score = 41.1 bits (92), Expect = 0.037
Identities = 25/59 (42%), Positives = 31/59 (52%)
Frame = +1
Query: 346 PQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASK 522
P L LE GI+ I+ LE AGY T+ V A L ++ GIS A KIL + SK
Sbjct: 362 PHLDQPLEMEGISKLVIQNLEHAGYDTIRRVLLASANDLASVPGISLELAYKILEQVSK 420
>UniRef50_A2XZT8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 353
Score = 41.1 bits (92), Expect = 0.037
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQR 813
GKTQ C LA+ LP G G+ +YIDTE F R++ + ++
Sbjct: 112 GKTQFCLKLALLATLPECYGGLNGRVLYIDTESKFSSRRMIEIGEK 157
>UniRef50_Q9FKM5 Cluster: DNA-repair protein XRCC3 homolog; n=18;
core eudicotyledons|Rep: DNA-repair protein XRCC3
homolog - Arabidopsis thaliana (Mouse-ear cress)
Length = 304
Score = 41.1 bits (92), Expect = 0.037
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +1
Query: 583 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 762
+LTTG + LD L GKTQLC L++ QLPI G G +Y+
Sbjct: 20 KLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHGGLNGSSLYL 79
Query: 763 DTEGTFRPERLLAVAQRYGMEGAAV 837
+E F RL ++ + ++
Sbjct: 80 HSEFPFPFRRLHQLSHTFHQSNPSI 104
>UniRef50_Q54PJ7 Cluster: Putative DNA repair protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative DNA repair
protein - Dictyostelium discoideum AX4
Length = 381
Score = 40.7 bits (91), Expect = 0.049
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVA 807
GKT + L V +P + G +GK +YIDTEG++ +R+ +A
Sbjct: 94 GKTNMAFQLLVNTSIPFDLGGVQGKAIYIDTEGSYSCQRVREMA 137
>UniRef50_Q757K4 Cluster: AER008Wp; n=1; Eremothecium gossypii|Rep:
AER008Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 510
Score = 40.7 bits (91), Expect = 0.049
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 589 TTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDT 768
TTG +D LL +GK+Q L++ QLP+E G G+C++I T
Sbjct: 88 TTGDVGIDALLNGGIYTHGITEVFGESSSGKSQFLMQLSLAVQLPLELDGSAGQCVFITT 147
Query: 769 EGTFRPERL 795
E +R+
Sbjct: 148 ESDLPTKRI 156
>UniRef50_O43542 Cluster: DNA-repair protein XRCC3; n=19;
Euteleostomi|Rep: DNA-repair protein XRCC3 - Homo
sapiens (Human)
Length = 346
Score = 39.5 bits (88), Expect = 0.11
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEAS-KLVPMGFTTATEFHQKR 570
I +++A +V+ V + L + +S + +L AS L TA + HQ++
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 571 AEII----QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+L+ G LD LL GKTQL L + Q P + G
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 739 GEGKCMYIDTEGTFRPERL 795
E +YI TE F +RL
Sbjct: 133 LEAGAVYICTEDAFPHKRL 151
>UniRef50_UPI0000D56187 Cluster: PREDICTED: similar to CG3325-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3325-PA - Tribolium castaneum
Length = 274
Score = 38.7 bits (86), Expect = 0.20
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 583 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 762
+++TG +D + GKTQLC L++ QLPI G +Y+
Sbjct: 38 RISTGCSAIDAITRGGIAVNRISEIVGYAGVGKTQLCLQLSLMAQLPISLGGLGKSVVYL 97
Query: 763 DTEGTFRPERLLAVAQRYGME 825
TE F +RL +A Y ++
Sbjct: 98 CTEDAFPIKRLKDLAITYSLK 118
>UniRef50_Q9UUL2 Cluster: DNA repair protein rhp57; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rhp57
- Schizosaccharomyces pombe (Fission yeast)
Length = 354
Score = 38.7 bits (86), Expect = 0.20
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = +1
Query: 586 LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYID 765
LTTG +LD L +GK+Q C L + QLP+ G ++I
Sbjct: 75 LTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKAAVFIS 134
Query: 766 TEGTFRPERLLAVAQ 810
TE +RL +A+
Sbjct: 135 TESGLETKRLFELAR 149
>UniRef50_Q9SK02 Cluster: DNA repair protein RAD51 homolog 2; n=6;
Magnoliophyta|Rep: DNA repair protein RAD51 homolog 2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 370
Score = 38.7 bits (86), Expect = 0.20
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLL 798
GK+Q C LA++ P+ G +G+ +YID E F R++
Sbjct: 114 GKSQFCMKLALSASFPVAYGGLDGRVIYIDVESKFSSRRVI 154
>UniRef50_Q17A54 Cluster: Spindle-b recombination protein spn-b;
n=1; Aedes aegypti|Rep: Spindle-b recombination protein
spn-b - Aedes aegypti (Yellowfever mosquito)
Length = 266
Score = 36.7 bits (81), Expect = 0.79
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +1
Query: 535 GFTTATEF---HQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLA 705
GF TA + H +R I+L G LD+L +GKTQ+C LA
Sbjct: 12 GFITAHQSLKAHHQRWRKIKL--GVDALDQLTGGGISSRGIVEIAGDPGSGKTQMCLHLA 69
Query: 706 VTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
+ CQ+ E G +YI TE F +RL+ + Q
Sbjct: 70 LACQMQCETRKG---VVYISTEHPFPSKRLVQMEQ 101
>UniRef50_Q8TH00 Cluster: Predicted Superfamily II helicase; n=1;
Methanopyrus kandleri|Rep: Predicted Superfamily II
helicase - Methanopyrus kandleri
Length = 711
Score = 36.7 bits (81), Expect = 0.79
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 355 ISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKL 525
++++EG G T +L AGYH+V +A A L ++GI E A KIL A +L
Sbjct: 654 LTEVEGVGRTLA--MRLYRAGYHSVRDLAEATVPELTRVRGIGEQLARKILESARRL 708
>UniRef50_A7DQP6 Cluster: RecA/RadA recombinase-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: RecA/RadA
recombinase-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 217
Score = 36.7 bits (81), Expect = 0.79
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +1
Query: 586 LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYID 765
++TG ++LD+ L TGKTQL LA+ I++ G +Y D
Sbjct: 2 ISTGLEKLDKSLFGGIPNGVIVDIFGKNGTGKTQLLLQLAINS---IKKGG---HVLYFD 55
Query: 766 TEGTFRPERLLAV 804
T G FRPER+L +
Sbjct: 56 TTGGFRPERILDI 68
>UniRef50_O43543 Cluster: DNA-repair protein XRCC2; n=16;
Tetrapoda|Rep: DNA-repair protein XRCC2 - Homo sapiens
(Human)
Length = 280
Score = 36.3 bits (80), Expect = 1.0
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ-RYGMEGAAVLXXC 849
TGKT++ + L C LP + G E + ++IDT+ F RL+ + + R ++ C
Sbjct: 52 TGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSSEEIIKYC 111
>UniRef50_UPI0000E46317 Cluster: PREDICTED: similar to Trad; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Trad - Strongylocentrotus purpuratus
Length = 208
Score = 35.1 bits (77), Expect = 2.4
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = +1
Query: 577 IIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCM 756
+ L+TG +D+LL GKTQ C TLA + EQ+ +
Sbjct: 42 VAYLSTGCDSIDKLLDGGVYTSELTEIVGQAAVGKTQFCLTLASCVAVSSEQN-----VL 96
Query: 757 YIDTEGTFRPERL 795
+IDT G F RL
Sbjct: 97 FIDTNGGFHASRL 109
>UniRef50_UPI0000499144 Cluster: DNA repair protein RAD51C; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
RAD51C - Entamoeba histolytica HM-1:IMSS
Length = 283
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +1
Query: 565 KRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGE 744
K ++ + T ++E+D+ L +GK+QLC +A QLP E G
Sbjct: 33 KEKKVRNIPTFNQEIDQFLNGGISLGEITQIVGFPGSGKSQLCMQIACNVQLPEEIGGLN 92
Query: 745 GKCMYIDTEGTFRPERLLAVAQ 810
+ +Y D+ F R+ +A+
Sbjct: 93 SESIYYDSYSQFCISRVQRMAE 114
>UniRef50_Q4ST80 Cluster: Chromosome undetermined SCAF14285, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14285,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 265
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQR 813
TGKT+L + L C +P G E + M++DT+ + RL+++ R
Sbjct: 46 TGKTELLYHLLCRCVMPAAAGGLEVEVMFVDTDYSLDMLRLVSILDR 92
>UniRef50_Q4SSQ5 Cluster: Chromosome undetermined SCAF14352, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14352, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 619
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQR 813
TGKT+L + L C +P G E + M++DT+ + RL+++ R
Sbjct: 91 TGKTELLYHLLCRCVMPAAAGGLEVEVMFVDTDYSLDMLRLVSILDR 137
>UniRef50_A1CLE6 Cluster: Rad51 family DNA repair protein, putative;
n=4; Trichocomaceae|Rep: Rad51 family DNA repair
protein, putative - Aspergillus clavatus
Length = 458
Score = 35.1 bits (77), Expect = 2.4
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLP-----IEQSGGEGKCMYIDTEGTFRPERLLAVA 807
GKTQL + L LP I G + ++IDT+G F P+RL +A
Sbjct: 126 GKTQLLYYLTAVAVLPSTYNGIRLDGRDSAVVFIDTDGRFDPQRLRTIA 174
>UniRef50_Q8TWK1 Cluster: RadA recombinase; n=1; Methanopyrus
kandleri|Rep: RadA recombinase - Methanopyrus kandleri
Length = 316
Score = 35.1 bits (77), Expect = 2.4
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 5/135 (3%)
Frame = +1
Query: 415 GYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFTTATEF-----HQKRAEI 579
G T+ +A + G+ E+ A KI+A+A + G A +K+ ++
Sbjct: 29 GIETLSDLAATDPATISDAFGVKESTAKKIIADAREEASKGIMEAKTLADLLEEEKKRDV 88
Query: 580 IQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMY 759
I TG + D + GK+Q +A GE +Y
Sbjct: 89 IP--TGIQGFDERMGGGLPTGVIVGMYGPPGAGKSQFATQVAAHAL-----KEGES-VLY 140
Query: 760 IDTEGTFRPERLLAV 804
IDTE FRP+RLL +
Sbjct: 141 IDTENAFRPQRLLEI 155
>UniRef50_Q4SEP3 Cluster: Chromosome undetermined SCAF14615, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14615, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 332
Score = 34.7 bits (76), Expect = 3.2
Identities = 33/144 (22%), Positives = 64/144 (44%)
Frame = +1
Query: 379 ITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFTTATEF 558
+ S DIK +E+ +E +A +K ++ K + + ++L P+ + A +
Sbjct: 20 LRSADIKTVEDLVSSDIEELA---QKCCVSYKALLAVR--RVLLAQHTAFPV--SGADLY 72
Query: 559 HQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+ + L++G+ LD+LL +GK+Q+C AV L ++QS
Sbjct: 73 EELLSSTAILSSGNPSLDKLLDSGFYTGEITELSGGPGSGKSQVCFAAAVHISLHLKQS- 131
Query: 739 GEGKCMYIDTEGTFRPERLLAVAQ 810
+++DT G RLL + +
Sbjct: 132 ----VVFVDTTGGLTAGRLLQMLE 151
>UniRef50_Q74A30 Cluster: Conserved domain protein; n=4;
Geobacter|Rep: Conserved domain protein - Geobacter
sulfurreducens
Length = 174
Score = 34.7 bits (76), Expect = 3.2
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 397 KKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKL 525
K+L EAG+ T E +A A ++ L IKG++ I+A+A++L
Sbjct: 20 KRLAEAGHDTFEKIAAAGEEGLRAIKGMNPRSVVSIVAQAAEL 62
>UniRef50_Q7RQQ6 Cluster: DNA-directed RNA polymerase; n=9; Plasmodium
(Vinckeia)|Rep: DNA-directed RNA polymerase - Plasmodium
yoelii yoelii
Length = 2020
Score = 34.7 bits (76), Expect = 3.2
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +3
Query: 48 IVGSSGVDFKHKNSEYLKF*HVCYVLQVCSNKQ*KKIKLKLFY 176
I+G GVDFKH S HV V QVCS K K I + FY
Sbjct: 1837 ILGLEGVDFKHIISN-----HVINVFQVCSRKNTKNILIIQFY 1874
>UniRef50_Q8TUJ3 Cluster: DNA repair protein; n=6;
Euryarchaeota|Rep: DNA repair protein - Methanosarcina
acetivorans
Length = 267
Score = 34.7 bits (76), Expect = 3.2
Identities = 27/74 (36%), Positives = 36/74 (48%)
Frame = +1
Query: 586 LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYID 765
L++G K LD LL TGKT +C LAV C ++Q G+ K ++ID
Sbjct: 50 LSSGCKPLDELLGGGFERGIVTQVFGAAGTGKTNICIQLAVEC---VKQ--GQ-KVIFID 103
Query: 766 TEGTFRPERLLAVA 807
TEG P R +A
Sbjct: 104 TEG-LSPVRFKQIA 116
>UniRef50_A2BXB3 Cluster: Putative uncharacterized protein; n=2;
Prochlorococcus marinus str. MIT 9515|Rep: Putative
uncharacterized protein - Prochlorococcus marinus
(strain MIT 9515)
Length = 248
Score = 34.3 bits (75), Expect = 4.2
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = +1
Query: 352 LISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
L+ +L+G G + + L +AGY ++E+V AP++ L+ IKGI + +K+
Sbjct: 198 LLCELDGVGGKTAGL--LWDAGYLSIEAVKNAPQEELLNIKGIGKKLVEKL 246
>UniRef50_Q22Y61 Cluster: Dynein heavy chain family protein; n=1;
Tetrahymena thermophila SB210|Rep: Dynein heavy chain
family protein - Tetrahymena thermophila SB210
Length = 4428
Score = 34.3 bits (75), Expect = 4.2
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 376 GITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFTTATE 555
G+ + + +E ++S +Y P +W + G+S A I+ E K P+GF A E
Sbjct: 3944 GLKANLKRSYQEFNQEFLDSCSYKPVQWNRLLFGLSFFHA--IVQERRKFGPLGFNKAYE 4001
Query: 556 FHQKRAEIIQLT 591
F+ +I LT
Sbjct: 4002 FNDSDLDISTLT 4013
>UniRef50_A3H7W4 Cluster: DEAD/DEAH box helicase-like; n=1;
Caldivirga maquilingensis IC-167|Rep: DEAD/DEAH box
helicase-like - Caldivirga maquilingensis IC-167
Length = 756
Score = 34.3 bits (75), Expect = 4.2
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 349 QLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLV 528
+L+ LEG G + L AGY ++E +A A L I+GI + A I+ +A +LV
Sbjct: 670 ELVVNLEGVGRVRA--RALYAAGYRSIEDLAKANVSDLTRIRGIGDKIAGSIIEQAHQLV 727
Query: 529 PMG 537
G
Sbjct: 728 KDG 730
>UniRef50_A3FQK6 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 133
Score = 33.9 bits (74), Expect = 5.6
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEG-KCMYI-DTEGTFRPERLLAVAQ 810
+GKT LC LA+ Q+P + GG G +YI D+EG F RL +++
Sbjct: 20 SGKTLLCKILALNIQIP-KSIGGPGLNAIYIGDSEGGFSDNRLREISK 66
>UniRef50_Q96MS0 Cluster: Roundabout homolog 3 precursor; n=23;
Euteleostomi|Rep: Roundabout homolog 3 precursor - Homo
sapiens (Human)
Length = 1386
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 827 PSIPYRCATASSLS-GLNVPSVSMYMHLPSPPDCSMG 720
P + YR A++ S G+ VPS + + LPSPPD G
Sbjct: 837 PGLLYRTLVAAATSAGVGVPSAPVLVQLPSPPDLEPG 873
>UniRef50_UPI000065EE6A Cluster: DNA-repair protein XRCC3 (X-ray
repair cross-complementing protein 3).; n=1; Takifugu
rubripes|Rep: DNA-repair protein XRCC3 (X-ray repair
cross-complementing protein 3). - Takifugu rubripes
Length = 346
Score = 33.5 bits (73), Expect = 7.4
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLV-PMGFTTATEFHQ---KRAEI-IQLTTGSKELDRLLX 624
L TI G+S + ++LA A+ P A H+ R E ++L G ++ LL
Sbjct: 35 LQTITGLSPSDVQQLLATAAAACRPHRPVPAVLLHRGECPRLEPGLRLGVGCVVINELLR 94
Query: 625 XXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERL 795
GKTQL L + Q P + G + +YI TE +F RL
Sbjct: 95 GGLPVGRITELSGQSGAGKTQLALQLCLCVQYPTDYGGLDSGAVYICTENSFPIRRL 151
>UniRef50_Q16EQ5 Cluster: Rad51A protein, putative; n=1; Aedes
aegypti|Rep: Rad51A protein, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 329
Score = 33.5 bits (73), Expect = 7.4
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = +1
Query: 379 ITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFTTATEF 558
+T IK L++ HTV A L+ + +S + + E + E+
Sbjct: 12 LTEYVIKLLQKNRIHTVYDFAKTEDDRLMRVSNLSYEEISFVKKELTSRFSGNCIQVVEY 71
Query: 559 HQKRAEIIQ-LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLA 705
+ ++++ L TG + LD LL +GKTQ+C T+A
Sbjct: 72 FRYLEDLVEPLKTGIRGLDLLLEGGLLPGHVMEIFGDSSSGKTQICVTMA 121
>UniRef50_A0RYZ3 Cluster: RecA/RadA recombinase related protein;
n=1; Cenarchaeum symbiosum|Rep: RecA/RadA recombinase
related protein - Cenarchaeum symbiosum
Length = 218
Score = 33.5 bits (73), Expect = 7.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 745 GKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
G+ ++ DT GT RPER+L + + G+ G +L
Sbjct: 49 GRVIFHDTSGTLRPERILQILRSRGLGGEGLL 80
>UniRef50_Q1PL11 Cluster: Putative uncharacterized protein; n=2;
Prochlorococcus marinus|Rep: Putative uncharacterized
protein - uncultured Prochlorococcus marinus clone
ASNC2259
Length = 236
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 367 EGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
E NG++ L E+GY T E + AP LI IKG+ + KI
Sbjct: 189 ELNGVSKNTASILWESGYLTKEQILNAPCSELIEIKGLGKNMISKI 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,141,422
Number of Sequences: 1657284
Number of extensions: 15023413
Number of successful extensions: 32851
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 31784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32826
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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