Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M04
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein. 259 1e-68
D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein. 259 1e-68
CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein. 259 1e-68
AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA hom... 259 1e-68
AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein. 259 1e-68
AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein. 259 1e-68
BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA hom... 256 1e-67
AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens ... 178 3e-44
CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein. 142 2e-33
BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor ... 142 2e-33
BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor ... 142 2e-33
AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor ... 142 2e-33
AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor ... 142 2e-33
D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein. 140 6e-33
D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein. 139 1e-32
BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein. 122 2e-27
BC001459-1|AAH01459.1| 242|Homo sapiens RAD51 homolog (RecA hom... 92 2e-18
AF203691-1|AAF61901.1| 75|Homo sapiens RAD51 protein. 89 2e-17
Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein. 48 6e-05
U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein. 48 6e-05
U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B... 48 6e-05
DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S. cerevi... 48 6e-05
CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein. 48 6e-05
BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S. cerevi... 48 6e-05
BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S. cer... 46 2e-04
AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S. cer... 46 2e-04
AY425955-1|AAR07948.1| 64|Homo sapiens Rad51 protein. 46 2e-04
AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein. 46 2e-04
BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complement... 40 0.016
BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complement... 40 0.016
BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complement... 40 0.016
AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complement... 40 0.016
AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein. 40 0.016
AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair cross-comp... 40 0.016
Y08837-1|CAA70065.1| 280|Homo sapiens XRCC2 protein. 36 0.15
BC042137-1|AAH42137.1| 280|Homo sapiens X-ray repair complement... 36 0.15
AY608888-1|AAT37157.1| 42|Homo sapiens truncated RAD51 protein. 36 0.15
AF520762-1|AAM55241.1| 280|Homo sapiens X-ray repair complement... 36 0.15
AF035587-1|AAC05369.1| 280|Homo sapiens X-ray repair cross-comp... 36 0.15
AC003109-1|AAC05802.1| 280|Homo sapiens Xrcc2 protein. 36 0.15
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 34 0.80
BC033618-1|AAH33618.1| 481|Homo sapiens SPECC1 protein protein. 32 2.4
BC021123-1|AAH21123.2| 987|Homo sapiens sperm antigen with calp... 31 7.4
AY816328-1|AAW30001.1| 790|Homo sapiens structure protein NSP5b... 31 7.4
AB041533-1|BAB16440.1| 759|Homo sapiens sperm antigen protein. 31 7.4
>D14134-1|BAA03189.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 259 bits (634), Expect = 1e-68
Identities = 125/183 (68%), Positives = 145/183 (79%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
AEA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL ++
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 868 XPD 876
D
Sbjct: 196 NTD 198
>D13804-1|BAA02962.1| 339|Homo sapiens HsRad51 protein.
Length = 339
Score = 259 bits (634), Expect = 1e-68
Identities = 125/183 (68%), Positives = 145/183 (79%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
AEA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL ++
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 868 XPD 876
D
Sbjct: 196 NTD 198
>CR536559-1|CAG38796.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 259 bits (634), Expect = 1e-68
Identities = 125/183 (68%), Positives = 145/183 (79%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
AEA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL ++
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 868 XPD 876
D
Sbjct: 196 NTD 198
>AY196785-1|AAN87149.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 259 bits (634), Expect = 1e-68
Identities = 125/183 (68%), Positives = 145/183 (79%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
AEA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL ++
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 868 XPD 876
D
Sbjct: 196 NTD 198
>AF233744-1|AAF69145.1| 339|Homo sapiens RAD51 protein.
Length = 339
Score = 259 bits (634), Expect = 1e-68
Identities = 125/183 (68%), Positives = 145/183 (79%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
AEA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL ++
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 868 XPD 876
D
Sbjct: 196 NTD 198
>AF165094-1|AAD49705.1| 339|Homo sapiens Rad51 protein.
Length = 339
Score = 259 bits (634), Expect = 1e-68
Identities = 125/183 (68%), Positives = 145/183 (79%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
AEA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL ++
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 868 XPD 876
D
Sbjct: 196 NTD 198
>BT019705-1|AAV38511.1| 339|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 339
Score = 256 bits (626), Expect = 1e-67
Identities = 124/183 (67%), Positives = 144/183 (78%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQ 687
AEA+KLVPMGFTTATEFHQ+R+EIIQ+TTGSKELD+LL FRTGKTQ
Sbjct: 76 AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135
Query: 688 LCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKSX 867
+CHTLAVTCQLPI++ GEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL ++
Sbjct: 136 ICHTLAVTCQLPIDRGEGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195
Query: 868 XPD 876
D
Sbjct: 196 NTD 198
>AK131299-1|BAD18467.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ16262 fis, clone IMR322008651, highly similar
to DNA REPAIR PROTEIN RAD51. ).
Length = 340
Score = 178 bits (433), Expect = 3e-44
Identities = 94/185 (50%), Positives = 118/185 (63%), Gaps = 2/185 (1%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXX--FRTGK 681
E+ + + + + + + R++ FRTGK
Sbjct: 76 TESRSVARLECNSVILVYCT-LRLSGSSDSPASASRVVGTTGGIETGSITEMFGEFRTGK 134
Query: 682 TQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICK 861
TQ+CHTLAVTCQLPI++ GGEGK MYIDTEGTFRPERLLAVA+RYG+ G+ VL +
Sbjct: 135 TQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYAR 194
Query: 862 SXXPD 876
+ D
Sbjct: 195 AFNTD 199
>CR456486-1|CAG30372.1| 340|Homo sapiens DMC1 protein.
Length = 340
Score = 142 bits (344), Expect = 2e-33
Identities = 75/172 (43%), Positives = 102/172 (59%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QL HTL VT QLP GK ++IDTE TFRP+RL +A R+ ++ AVL
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVL 185
>BC125164-1|AAI25165.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 142 bits (344), Expect = 2e-33
Identities = 75/172 (43%), Positives = 102/172 (59%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QL HTL VT QLP GK ++IDTE TFRP+RL +A R+ ++ AVL
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVL 185
>BC125163-1|AAI25164.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 142 bits (344), Expect = 2e-33
Identities = 75/172 (43%), Positives = 102/172 (59%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QL HTL VT QLP GK ++IDTE TFRP+RL +A R+ ++ AVL
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVL 185
>AY520538-1|AAR89915.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 142 bits (344), Expect = 2e-33
Identities = 75/172 (43%), Positives = 102/172 (59%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QL HTL VT QLP GK ++IDTE TFRP+RL +A R+ ++ AVL
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVL 185
>AL022320-2|CAB45656.1| 340|Homo sapiens DMC1 dosage suppressor of
mck1 homolog, meiosis-specific homologous recombinati
protein.
Length = 340
Score = 142 bits (344), Expect = 2e-33
Identities = 75/172 (43%), Positives = 102/172 (59%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QL HTL VT QLP GK ++IDTE TFRP+RL +A R+ ++ AVL
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVL 185
>D63882-1|BAA09932.1| 340|Homo sapiens HsLim15 protein.
Length = 340
Score = 140 bits (339), Expect = 6e-33
Identities = 74/172 (43%), Positives = 101/172 (58%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QL HTL VT QLP GK ++IDTE TFRP+RL +A R+ ++ VL
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDPVL 185
>D64108-1|BAA10970.1| 340|Homo sapiens DMC1 homologue protein.
Length = 340
Score = 139 bits (337), Expect = 1e-32
Identities = 74/172 (43%), Positives = 101/172 (58%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI D KKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADNKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVL 840
QL HTL VT QLP GK ++IDTE TFRP+RL +A R+ ++ AVL
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVL 185
>BC035658-1|AAH35658.1| 165|Homo sapiens DMC1 protein protein.
Length = 165
Score = 122 bits (293), Expect = 2e-27
Identities = 65/151 (43%), Positives = 87/151 (57%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
+D +E Q I L+ +GI DIKKL+ G T++ + ++ L +KG+SEAK DKI
Sbjct: 14 QDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKI 73
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
A+KL+ GF TA E+ +KR + +TTGS+E D+LL FRTGKT
Sbjct: 74 KEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKT 133
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGT 777
QL HTL VT QLP GK ++IDTE T
Sbjct: 134 QLSHTLCVTAQLPGAGGYPGGKIIFIDTENT 164
>BC001459-1|AAH01459.1| 242|Homo sapiens RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae) protein.
Length = 242
Score = 92.3 bits (219), Expect = 2e-18
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
Query: 508 AEASK 522
A A +
Sbjct: 76 AVAER 80
>AF203691-1|AAF61901.1| 75|Homo sapiens RAD51 protein.
Length = 75
Score = 89.0 bits (211), Expect = 2e-17
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +1
Query: 328 DADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKIL 507
+ + GPQ IS+LE GI + D+KKLEEAG+HTVE+VAYAPKK LI IKGISEAKADKIL
Sbjct: 16 EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75
>Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein.
Length = 350
Score = 47.6 bits (108), Expect = 6e-05
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQ---LTTGSKELDRLLXXX 630
L+ + G+S ++L S+ TA +R+ L+T LD L
Sbjct: 38 LMKVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGG 97
Query: 631 XXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQ C +++ LP G EG +YIDTE F ERL+ +A+
Sbjct: 98 VACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAE 157
>U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein.
Length = 350
Score = 47.6 bits (108), Expect = 6e-05
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQ---LTTGSKELDRLLXXX 630
L+ + G+S ++L S+ TA +R+ L+T LD L
Sbjct: 38 LMKVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGG 97
Query: 631 XXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQ C +++ LP G EG +YIDTE F ERL+ +A+
Sbjct: 98 VACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAE 157
>U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B
protein.
Length = 350
Score = 47.6 bits (108), Expect = 6e-05
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQ---LTTGSKELDRLLXXX 630
L+ + G+S ++L S+ TA +R+ L+T LD L
Sbjct: 38 LMKVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGG 97
Query: 631 XXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQ C +++ LP G EG +YIDTE F ERL+ +A+
Sbjct: 98 VACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAE 157
>DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 350
Score = 47.6 bits (108), Expect = 6e-05
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQ---LTTGSKELDRLLXXX 630
L+ + G+S ++L S+ TA +R+ L+T LD L
Sbjct: 38 LMKVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGG 97
Query: 631 XXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQ C +++ LP G EG +YIDTE F ERL+ +A+
Sbjct: 98 VACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAE 157
>CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein.
Length = 350
Score = 47.6 bits (108), Expect = 6e-05
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQ---LTTGSKELDRLLXXX 630
L+ + G+S ++L S+ TA +R+ L+T LD L
Sbjct: 38 LMKVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGG 97
Query: 631 XXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQ C +++ LP G EG +YIDTE F ERL+ +A+
Sbjct: 98 VACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAE 157
>BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 384
Score = 47.6 bits (108), Expect = 6e-05
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 460 LITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQ---LTTGSKELDRLLXXX 630
L+ + G+S ++L S+ TA +R+ L+T LD L
Sbjct: 38 LMKVTGLSYRGVHELLCMVSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGG 97
Query: 631 XXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ 810
GKTQ C +++ LP G EG +YIDTE F ERL+ +A+
Sbjct: 98 VACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAE 157
>BC107753-1|AAI07754.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 45.6 bits (103), Expect = 2e-04
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 400 KLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILA----EASKLVPMGFTTATEFHQK 567
KL AG+ T E + L GIS+A+A + L E P + +E H+K
Sbjct: 26 KLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPR-YAGTSESHKK 84
Query: 568 --RAEIIQ-------LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQL 720
E+++ + T LD +L GKTQLC LAV Q+
Sbjct: 85 CTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQI 144
Query: 721 PIEQSGGEGKCMYIDTEGTFRPERLLAVA 807
P G G+ ++IDTEG+F +R++ +A
Sbjct: 145 PECFGGVAGEAVFIDTEGSFMVDRVVDLA 173
>AY623112-1|AAT38108.1| 376|Homo sapiens RAD51 homolog C (S.
cerevisiae) protein.
Length = 376
Score = 45.6 bits (103), Expect = 2e-04
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 400 KLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILA----EASKLVPMGFTTATEFHQK 567
KL AG+ T E + L GIS+A+A + L E P + +E H+K
Sbjct: 26 KLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPR-YAGTSESHKK 84
Query: 568 --RAEIIQ-------LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQL 720
E+++ + T LD +L GKTQLC LAV Q+
Sbjct: 85 CTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQI 144
Query: 721 PIEQSGGEGKCMYIDTEGTFRPERLLAVA 807
P G G+ ++IDTEG+F +R++ +A
Sbjct: 145 PECFGGVAGEAVFIDTEGSFMVDRVVDLA 173
>AY425955-1|AAR07948.1| 64|Homo sapiens Rad51 protein.
Length = 64
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 439 AYAPKKWLITIKGISEAKADKILAEA 516
AYAPKK LI IKGISEAKADKIL E+
Sbjct: 1 AYAPKKELINIKGISEAKADKILTES 26
>AF029669-1|AAC39604.1| 376|Homo sapiens Rad51C protein.
Length = 376
Score = 45.6 bits (103), Expect = 2e-04
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 400 KLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILA----EASKLVPMGFTTATEFHQK 567
KL AG+ T E + L GIS+A+A + L E P + +E H+K
Sbjct: 26 KLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPR-YAGTSESHKK 84
Query: 568 --RAEIIQ-------LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQL 720
E+++ + T LD +L GKTQLC LAV Q+
Sbjct: 85 CTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQI 144
Query: 721 PIEQSGGEGKCMYIDTEGTFRPERLLAVA 807
P G G+ ++IDTEG+F +R++ +A
Sbjct: 145 PECFGGVAGEAVFIDTEGSFMVDRVVDLA 173
>BT007417-1|AAP36085.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.016
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEAS-KLVPMGFTTATEFHQKR 570
I +++A +V+ V + L + +S + +L AS L TA + HQ++
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 571 AEII----QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+L+ G LD LL GKTQL L + Q P + G
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 739 GEGKCMYIDTEGTFRPERL 795
E +YI TE F +RL
Sbjct: 133 LEAGAVYICTEDAFPHKRL 151
>BC011725-1|AAH11725.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.016
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEAS-KLVPMGFTTATEFHQKR 570
I +++A +V+ V + L + +S + +L AS L TA + HQ++
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 571 AEII----QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+L+ G LD LL GKTQL L + Q P + G
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 739 GEGKCMYIDTEGTFRPERL 795
E +YI TE F +RL
Sbjct: 133 LEAGAVYICTEDAFPHKRL 151
>BC001036-1|AAH01036.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.016
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEAS-KLVPMGFTTATEFHQKR 570
I +++A +V+ V + L + +S + +L AS L TA + HQ++
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 571 AEII----QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+L+ G LD LL GKTQL L + Q P + G
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 739 GEGKCMYIDTEGTFRPERL 795
E +YI TE F +RL
Sbjct: 133 LEAGAVYICTEDAFPHKRL 151
>AF508041-1|AAM23015.1| 346|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 3 protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.016
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEAS-KLVPMGFTTATEFHQKR 570
I +++A +V+ V + L + +S + +L AS L TA + HQ++
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 571 AEII----QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+L+ G LD LL GKTQL L + Q P + G
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 739 GEGKCMYIDTEGTFRPERL 795
E +YI TE F +RL
Sbjct: 133 LEAGAVYICTEDAFPHKRL 151
>AF037222-1|AAC04805.1| 346|Homo sapiens XRCC3 protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.016
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEAS-KLVPMGFTTATEFHQKR 570
I +++A +V+ V + L + +S + +L AS L TA + HQ++
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 571 AEII----QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+L+ G LD LL GKTQL L + Q P + G
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 739 GEGKCMYIDTEGTFRPERL 795
E +YI TE F +RL
Sbjct: 133 LEAGAVYICTEDAFPHKRL 151
>AF035586-1|AAC05368.1| 346|Homo sapiens X-ray repair
cross-complementing protein 3 protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.016
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 394 IKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEAS-KLVPMGFTTATEFHQKR 570
I +++A +V+ V + L + +S + +L AS L TA + HQ++
Sbjct: 13 IAAIKKAKLKSVKEVLHFSGPDLKRLTNLSSPEVWHLLRTASLHLRGSSILTALQLHQQK 72
Query: 571 AEII----QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSG 738
+L+ G LD LL GKTQL L + Q P + G
Sbjct: 73 ERFPTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGG 132
Query: 739 GEGKCMYIDTEGTFRPERL 795
E +YI TE F +RL
Sbjct: 133 LEAGAVYICTEDAFPHKRL 151
>Y08837-1|CAA70065.1| 280|Homo sapiens XRCC2 protein.
Length = 280
Score = 36.3 bits (80), Expect = 0.15
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ-RYGMEGAAVLXXC 849
TGKT++ + L C LP + G E + ++IDT+ F RL+ + + R ++ C
Sbjct: 52 TGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSSEEIIKYC 111
>BC042137-1|AAH42137.1| 280|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 2 protein.
Length = 280
Score = 36.3 bits (80), Expect = 0.15
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ-RYGMEGAAVLXXC 849
TGKT++ + L C LP + G E + ++IDT+ F RL+ + + R ++ C
Sbjct: 52 TGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSSEEIIKYC 111
>AY608888-1|AAT37157.1| 42|Homo sapiens truncated RAD51 protein.
Length = 42
Score = 36.3 bits (80), Expect = 0.15
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 451 KKWLITIKGISEAKADKILAE 513
KK LI IKGISEAKADKIL E
Sbjct: 1 KKELINIKGISEAKADKILVE 21
>AF520762-1|AAM55241.1| 280|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 2 protein.
Length = 280
Score = 36.3 bits (80), Expect = 0.15
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ-RYGMEGAAVLXXC 849
TGKT++ + L C LP + G E + ++IDT+ F RL+ + + R ++ C
Sbjct: 52 TGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSSEEIIKYC 111
>AF035587-1|AAC05369.1| 280|Homo sapiens X-ray repair
cross-complementing protein 2 protein.
Length = 280
Score = 36.3 bits (80), Expect = 0.15
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ-RYGMEGAAVLXXC 849
TGKT++ + L C LP + G E + ++IDT+ F RL+ + + R ++ C
Sbjct: 52 TGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSSEEIIKYC 111
>AC003109-1|AAC05802.1| 280|Homo sapiens Xrcc2 protein.
Length = 280
Score = 36.3 bits (80), Expect = 0.15
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 673 TGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQ-RYGMEGAAVLXXC 849
TGKT++ + L C LP + G E + ++IDT+ F RL+ + + R ++ C
Sbjct: 52 TGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSSEEIIKYC 111
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 33.9 bits (74), Expect = 0.80
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 827 PSIPYRCATASSLS-GLNVPSVSMYMHLPSPPDCSMG 720
P + YR A++ S G+ VPS + + LPSPPD G
Sbjct: 837 PGLLYRTLVAAATSAGVGVPSAPVLVQLPSPPDLEPG 873
>BC033618-1|AAH33618.1| 481|Homo sapiens SPECC1 protein protein.
Length = 481
Score = 32.3 bits (70), Expect = 2.4
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 346 PQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAK--ADKILAEAS 519
P ++S+L +T I+K+EE + T E + T++ +S+ + ++ AE
Sbjct: 53 PNIVSELSLASLTE-KIQKMEENHHSTAEELQ-------ATLQELSDQQQMVQELTAENE 104
Query: 520 KLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLL 621
KLV T FHQ R QL+ +++L LL
Sbjct: 105 KLVDEKTILETSFHQHRERAEQLSQENEKLMNLL 138
>BC021123-1|AAH21123.2| 987|Homo sapiens sperm antigen with
calponin homology and coiled-coil domains 1 protein.
Length = 987
Score = 30.7 bits (66), Expect = 7.4
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 346 PQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAK--ADKILAEAS 519
P +S+L +T I+K+EE + T E + T++ +S+ + ++ AE
Sbjct: 281 PNSVSELSLASLTE-KIQKMEENHHSTAEELQ-------ATLQELSDQQQMVQELTAENE 332
Query: 520 KLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLL 621
KLV T FHQ R QL+ +++L LL
Sbjct: 333 KLVDEKTILETSFHQHRERAEQLSQENEKLMNLL 366
>AY816328-1|AAW30001.1| 790|Homo sapiens structure protein NSP5b3a
protein.
Length = 790
Score = 30.7 bits (66), Expect = 7.4
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 346 PQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAK--ADKILAEAS 519
P +S+L +T I+K+EE + T E + T++ +S+ + ++ AE
Sbjct: 362 PNSVSELSLASLTE-KIQKMEENHHSTAEELQ-------ATLQELSDQQQMVQELTAENE 413
Query: 520 KLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLL 621
KLV T FHQ R QL+ +++L LL
Sbjct: 414 KLVDEKTILETSFHQHRERAEQLSQENEKLMNLL 447
>AB041533-1|BAB16440.1| 759|Homo sapiens sperm antigen protein.
Length = 759
Score = 30.7 bits (66), Expect = 7.4
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 346 PQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAK--ADKILAEAS 519
P +S+L +T I+K+EE + T E + T++ +S+ + ++ AE
Sbjct: 331 PNSVSELSLASLTE-KIQKMEENHHSTAEELQ-------ATLQELSDQQQMVQELTAENE 382
Query: 520 KLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLL 621
KLV T FHQ R QL+ +++L LL
Sbjct: 383 KLVDEKTILETSFHQHRERAEQLSQENEKLMNLL 416
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,431,447
Number of Sequences: 237096
Number of extensions: 2296368
Number of successful extensions: 4410
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4410
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -