Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M04
(891 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L41342-1|AAA64873.1| 336|Drosophila melanogaster protein ( Dros... 205 6e-53
D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein h... 205 6e-53
D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein. 205 6e-53
AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA... 205 6e-53
BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p pro... 160 3e-39
AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB... 160 3e-39
AY257540-1|AAP13056.1| 270|Drosophila melanogaster spindle D pr... 49 1e-05
AY071162-1|AAL48784.1| 270|Drosophila melanogaster RE19845p pro... 49 1e-05
AE014297-4083|AAN14399.1| 270|Drosophila melanogaster CG31069-P... 49 1e-05
AF069531-1|AAC42663.1| 341|Drosophila melanogaster spindle B pr... 33 0.40
AE014297-1844|AAF55050.1| 341|Drosophila melanogaster CG3325-PA... 33 0.40
AY070920-1|AAL48542.1| 341|Drosophila melanogaster RE02671p pro... 32 0.93
>L41342-1|AAA64873.1| 336|Drosophila melanogaster protein (
Drosophila melanogaster(clone pDmR2210) RAD51 homolog
gene, complete cds. ).
Length = 336
Score = 205 bits (501), Expect = 6e-53
Identities = 100/184 (54%), Positives = 126/184 (68%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKS 864
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TFRPERL A+AQRY + + VL ++
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRA 191
Query: 865 XXPD 876
D
Sbjct: 192 HNSD 195
>D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein
homologue protein.
Length = 336
Score = 205 bits (501), Expect = 6e-53
Identities = 100/184 (54%), Positives = 126/184 (68%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKS 864
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TFRPERL A+AQRY + + VL ++
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRA 191
Query: 865 XXPD 876
D
Sbjct: 192 HNSD 195
>D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein.
Length = 336
Score = 205 bits (501), Expect = 6e-53
Identities = 100/184 (54%), Positives = 126/184 (68%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKS 864
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TFRPERL A+AQRY + + VL ++
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRA 191
Query: 865 XXPD 876
D
Sbjct: 192 HNSD 195
>AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA,
isoform A protein.
Length = 336
Score = 205 bits (501), Expect = 6e-53
Identities = 100/184 (54%), Positives = 126/184 (68%)
Frame = +1
Query: 325 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 504
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 505 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 684
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 685 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGMEGAAVLXXCCICKS 864
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TFRPERL A+AQRY + + VL ++
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRA 191
Query: 865 XXPD 876
D
Sbjct: 192 HNSD 195
>BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p
protein.
Length = 284
Score = 160 bits (388), Expect = 3e-39
Identities = 75/138 (54%), Positives = 94/138 (68%)
Frame = +1
Query: 463 ITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXX 642
+ I G+ K ++I+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL
Sbjct: 1 MAIPGLGGGKVEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETG 60
Query: 643 XXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGM 822
FR GKTQLCHTLAVTCQLPI Q GGEGKCMYIDTE TFRPERL A+AQRY +
Sbjct: 61 SITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKL 120
Query: 823 EGAAVLXXCCICKSXXPD 876
+ VL ++ D
Sbjct: 121 NESEVLDNVAFTRAHNSD 138
>AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB,
isoform B protein.
Length = 279
Score = 160 bits (388), Expect = 3e-39
Identities = 75/138 (54%), Positives = 94/138 (68%)
Frame = +1
Query: 463 ITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXX 642
+ I G+ K ++I+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL
Sbjct: 1 MAIPGLGGGKVEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETG 60
Query: 643 XXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFRPERLLAVAQRYGM 822
FR GKTQLCHTLAVTCQLPI Q GGEGKCMYIDTE TFRPERL A+AQRY +
Sbjct: 61 SITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKL 120
Query: 823 EGAAVLXXCCICKSXXPD 876
+ VL ++ D
Sbjct: 121 NESEVLDNVAFTRAHNSD 138
>AY257540-1|AAP13056.1| 270|Drosophila melanogaster spindle D
protein.
Length = 270
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 583 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 762
++ TG K LD TGKTQ+C L + Q+P G EG ++I
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 763 DTEGTFRPERLLAVA 807
DT F P+RL+ +A
Sbjct: 105 DTRQDFHPDRLMGLA 119
>AY071162-1|AAL48784.1| 270|Drosophila melanogaster RE19845p
protein.
Length = 270
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 583 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 762
++ TG K LD TGKTQ+C L + Q+P G EG ++I
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 763 DTEGTFRPERLLAVA 807
DT F P+RL+ +A
Sbjct: 105 DTRQDFHPDRLMGLA 119
>AE014297-4083|AAN14399.1| 270|Drosophila melanogaster CG31069-PA
protein.
Length = 270
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 583 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 762
++ TG K LD TGKTQ+C L + Q+P G EG ++I
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 763 DTEGTFRPERLLAVA 807
DT F P+RL+ +A
Sbjct: 105 DTRQDFHPDRLMGLA 119
>AF069531-1|AAC42663.1| 341|Drosophila melanogaster spindle B
protein.
Length = 341
Score = 33.5 bits (73), Expect = 0.40
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCM-YIDTEGTFRPERLLAVAQ 810
GKTQL L++ QLP E GG GK + YI TE +F RLL +++
Sbjct: 118 GKTQLLLQLSLCVQLPREL-GGLGKGVAYICTESSFPARRLLQMSK 162
>AE014297-1844|AAF55050.1| 341|Drosophila melanogaster CG3325-PA
protein.
Length = 341
Score = 33.5 bits (73), Expect = 0.40
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCM-YIDTEGTFRPERLLAVAQ 810
GKTQL L++ QLP E GG GK + YI TE +F RLL +++
Sbjct: 118 GKTQLLLQLSLCVQLPREL-GGLGKGVAYICTESSFPARRLLQMSK 162
>AY070920-1|AAL48542.1| 341|Drosophila melanogaster RE02671p
protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.93
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 676 GKTQLCHTLAVTCQLPIEQSGGEGKCM-YIDTEGTFRPERLLAVAQ 810
GKT+L L++ QLP E GG GK + YI TE +F RLL +++
Sbjct: 118 GKTELLLQLSLCVQLPREL-GGLGKGVAYICTESSFPARRLLQMSK 162
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,618,348
Number of Sequences: 53049
Number of extensions: 693992
Number of successful extensions: 1570
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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