Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M03
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 42 9e-05
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 42 2e-04
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 40 5e-04
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 37 0.003
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 36 0.006
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 36 0.010
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 35 0.014
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 35 0.018
SPCC24B10.13 |skb5||Shk1 kinase binding protein 5|Schizosaccharo... 33 0.041
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.13
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.51
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 28 2.1
SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 27 3.6
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 27 4.7
SPAC8E11.01c ||SPAC959.01|beta-fructofuranosidase|Schizosaccharo... 27 4.7
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 26 6.3
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 26 6.3
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 26 6.3
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 26 8.3
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 42.3 bits (95), Expect = 9e-05
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 3/152 (1%)
Frame = +2
Query: 341 LSPDSKMV-VLHDFTPCVDDELEVKRGQIVNVLYREND--WVYVIVAESRREGFIPHSYC 511
+ P K++ L+D+T E+ +G +V+ REND W V + GF+P S+
Sbjct: 22 IEPPRKVIRALYDYTARKATEVSFAKGDFFHVIGRENDKAWYEVCNPAAGTRGFVPVSH- 80
Query: 512 APCEHHDLKKKLPRSRSPADLAHRDVSQLSVSDGVTNDGHSELGSEGEACPFSKDPSXRY 691
++ K + R + L+ + T SEL S G F
Sbjct: 81 ----FEEIGKTVKSERDSDGSGQISFTDLTTNSSTTRSSISELHS-GSQPLFG------- 128
Query: 692 VVLYTFTARDENDVDVERGEFVTVLNREDPDW 787
+V + F A ++++ + GE + ++ R + +W
Sbjct: 129 IVQFDFAAERPDELEAKAGEAIIIIARSNHEW 160
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 662 PFSKDPSXRYV-VLYTFTARDENDVDVERGEFVTVLNRE-DPDWY 790
PFS +P + + LY +TAR +V +G+F V+ RE D WY
Sbjct: 19 PFSIEPPRKVIRALYDYTARKATEVSFAKGDFFHVIGRENDKAWY 63
Score = 30.7 bits (66), Expect = 0.29
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +2
Query: 263 SPGMGRI--TGSASIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVL 436
S G G+I T + + R I + H S +V DF DELE K G+ + ++
Sbjct: 94 SDGSGQISFTDLTTNSSTTRSSISELHSGSQPLFGIVQFDFAAERPDELEAKAGEAIIII 153
Query: 437 YREN-DW-VYVIVAESRREGFIPHSY 508
R N +W V + G IP S+
Sbjct: 154 ARSNHEWLVAKPIGRLGGPGLIPLSF 179
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 41.5 bits (93), Expect = 2e-04
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +2
Query: 662 PFSKDPSXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
P + Y+ LY F R N++ +++ E + ++ +E W W+ +G E +P+ +V
Sbjct: 1102 PAEVEKKDLYLALYDFAGRSPNEMTIKKDEIIEIVQKEPSGW-WLALKNGAEGWVPATYV 1160
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 635 ELGSEGEACPFSKDPSXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQ 814
++G + +A ++ +V+Y ++ +EN++++ E + +L D W+ S GQ
Sbjct: 712 QVGGDVKATEHTQPTKTPAIVIYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQ 771
Query: 815 EXXIPSGFV 841
+ PS +V
Sbjct: 772 QGLFPSNYV 780
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/59 (20%), Positives = 31/59 (52%)
Frame = +2
Query: 332 EHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSY 508
EH + +V++D++P ++E+E+ + + +L +D ++ ++G P +Y
Sbjct: 721 EHTQPTKTPAIVIYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSNY 779
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +2
Query: 668 SKDPSXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFVYP 847
SK + +Y+FT R+E ++D+ G+ + V + PDWY + + + + + ++P
Sbjct: 277 SKKETVFVKAIYSFTGRNEKELDLHTGDVIQVSEQLGPDWYMGEKVNSKAEKLGNSGMFP 336
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 686 RYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
R + +Y F D D+ GE + VL + DW W +G+E PS +V
Sbjct: 144 RVLAMYDFPGPDAGDLGFHAGEVIIVLEHVNNDW-WRGELNGKEGIFPSNYV 194
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 35.5 bits (78), Expect = 0.010
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 692 VVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
VVLY FT E + G+ T+L +D + V+ DG + IP+ +V
Sbjct: 521 VVLYDFTGEHEGVITASEGQEFTLLEPDDGSGWVRVKIDGTDGLIPASYV 570
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 305 TLVRVGIEKEHGLSPDSKM--VVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAES 478
+L V E+ P SK+ VVL+DFT + + GQ +L ++ +V V
Sbjct: 500 SLSNVKTEETTPAEPASKVDGVVLYDFTGEHEGVITASEGQEFTLLEPDDGSGWVRVKID 559
Query: 479 RREGFIPHSY 508
+G IP SY
Sbjct: 560 GTDGLIPASY 569
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 35.1 bits (77), Expect = 0.014
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +2
Query: 521 EHHDLKKKLPR-SRSPADLAHRDVSQLSVSDGVTN--DGHSELGSEGEACPFSKDPSXRY 691
E L K P S S A+L + SQ +VS +N D + + P + S +
Sbjct: 366 EDIQLSFKQPELSASSAELDEKLKSQCNVSPSPSNISDAPPSKLNRSYSSPLASISSRKV 425
Query: 692 VVL-YTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQE 817
V + Y+F EN++ +++G+ + VL D W W+ G++
Sbjct: 426 VRMKYSFEPETENELKLKKGDLLLVLKEIDEGW-WVGEKLGED 467
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Frame = +2
Query: 371 HDFTPCVDDELEVKRGQIVNVLYR--ENDWVYVIVAE----SRREGFIPHSYCAPCEHHD 532
+ F P ++EL++K+G ++ VL E WV + E + G P +YC P D
Sbjct: 430 YSFEPETENELKLKKGDLLLVLKEIDEGWWVGEKLGEDGVFTGNTGMFPSNYCVPAHPWD 489
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 34.7 bits (76), Expect = 0.018
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 695 VLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFVYP 847
VLY F A +++ V+ V ++N +W DG+E +PS F+ P
Sbjct: 515 VLYDFIAEAADELTVKANMRVVIVNDTASSDWWKCSVDGKEGVVPSNFIKP 565
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 347 PDSKMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSY 508
P +KM L+D+T DE+ + Q ++ Y + D +++V + G P +Y
Sbjct: 81 PSTKMKALYDYTQQSVDEISFQADQTLD-CYGDTDSDWILVGFNNNFGLAPRNY 133
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/57 (21%), Positives = 24/57 (42%)
Frame = +2
Query: 617 TNDGHSELGSEGEACPFSKDPSXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDW 787
+ND E+G +PS + LY +T + +++ + + + D DW
Sbjct: 61 SNDDDEEIGIVPSNYITEAEPSTKMKALYDYTQQSVDEISFQADQTLDCYGDTDSDW 117
>SPCC24B10.13 |skb5||Shk1 kinase binding protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 140
Score = 33.5 bits (73), Expect = 0.041
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 362 VVLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIPHSY 508
V L+DF P D+EL GQ + +L +D W+ S R G +P ++
Sbjct: 86 VALYDFEPLHDNELGFTTGQRLCILSESSDGWLIAYDDASGRSGLVPETF 135
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 353 SKMVVLHDFTPCVDDELEVKRGQIVNVLYR-ENDW---VYVIVAESRREGFIPHSYCAPC 520
+++V L+ + D+LE GQ+++V+ + DW YV +R+ G P + P
Sbjct: 6 TRVVALYPYRSSFSDDLEFDPGQVIDVVSNLDGDWYTGTYVDSDGNRKIGSFPKDFTEPA 65
Query: 521 E 523
E
Sbjct: 66 E 66
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.51
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Frame = -3
Query: 699 STTYLXEGSLLKGHASPSLPSSECPSFVTPSDTDNCETSLWAKSAGDLLLGSFFFKS*CS 520
S++YL S++ +SPS SS + + S + TS + S L S + S
Sbjct: 206 SSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASS 265
Query: 519 HGAQYECGMKPSLRDSATMT*TQSFSLYRTLTICPRFTSN--SSSTHGVKSWSTTIFESG 346
+ S S+ + + + S + + P TS+ SSS+ S+S+T+ S
Sbjct: 266 SSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSS 325
Query: 345 L-RPCSFSMPTLTNVSMLADPVMRP 274
+ SFS ++ S ++ P
Sbjct: 326 MSSSSSFSSSPTSSSSTISSSSSSP 350
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 686 RYVVLYTFTARDENDVDVERGEFVTVLNREDPDWY 790
R LY F A ++ ++ ++G+ + VL DW+
Sbjct: 219 RVRALYDFAATEQGELSFKKGDIILVLESVYKDWW 253
>SPAC26H5.06 |pot1||telomere end-binding protein Pot1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 555
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 411 FTSNSSSTHGVKSWSTTIF 355
FT + S HG K W TT++
Sbjct: 52 FTPSRQSLHGTKDWVTTVY 70
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 545 LPRSRSPADLAHRDVSQLSVSDGVTNDGHSEL 640
LP + P D + S V+ G+ DGH+ L
Sbjct: 210 LPNTTQPPDFVYDRPSDWDVNAGIDEDGHTAL 241
>SPAC8E11.01c
||SPAC959.01|beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 645 VKVKHVPLAKILXEDT*CYTHSLQETKMMLM 737
+++KH + I E T CYTH QET+ +++
Sbjct: 296 MRMKHRGMFTIPRELTLCYTHLNQETRGLVL 326
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 677 PSXRYV-VLYTFTARDENDVDVERGEFVTVLNREDPDWY 790
P YV LY + A +++D+ + + VLNR+ W+
Sbjct: 352 PIFAYVRALYAYKATLPSEIDLNVDDTLVVLNRQKDGWW 390
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 832 WFCVSCCRXSHH 867
WFCV+C SHH
Sbjct: 158 WFCVTCSIKSHH 169
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 708 NVYSTTYLXEGSLLKGHASPSLPSSECPSFVTPSDTDN 595
N ST EGS SPS+ S PS V+PS + N
Sbjct: 526 NSKSTLKSVEGSAFSMSKSPSVLSMTTPSGVSPSISKN 563
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 841 HKTRWYXPFLTITPYYPIPIW 779
H R + PFL + P +P W
Sbjct: 419 HSLRQHGPFLVVVPLSTVPAW 439
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,440,762
Number of Sequences: 5004
Number of extensions: 69119
Number of successful extensions: 190
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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