Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_M03
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,874...    34   0.13 
03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,547...    30   2.1  
09_04_0180 + 15367737-15367755,15368874-15369739                       29   5.0  
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525...    29   6.6  
07_03_0396 + 17672009-17672339,17672408-17673087                       28   8.7  

>03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,
            8746665-8746893,8747314-8747420,8747560-8747622,
            8747883-8747983,8748996-8749090,8749330-8749350,
            8749987-8750082,8750188-8750308,8750415-8750570,
            8750679-8750869,8751207-8751478,8751853-8751954,
            8752006-8752038,8752132-8752308,8752397-8752466,
            8752512-8752585,8752667-8752908,8752983-8753129,
            8753526-8753751,8753893-8753970,8754378-8754521,
            8754829-8755008,8755335-8755394,8755484-8755523,
            8758653-8759137
          Length = 1294

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 368  LHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREG 490
            L+DFT   DDEL +  G+ V + Y  + W YV      R+G
Sbjct: 1090 LYDFTAGGDDELSLTAGEDVEIEYEVDGWYYVKKKRPGRDG 1130


>03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,
            5478055-5478132,5478227-5478280,5478466-5478650,
            5478781-5480374,5480506-5480700,5480753-5480904,
            5481213-5481486,5481597-5481733,5482219-5482258,
            5482773-5483261,5483605-5484168
          Length = 1477

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +1

Query: 289  ISKHRNISESWH*EGTWP 342
            +SKHRN+S++WH   T+P
Sbjct: 1065 MSKHRNVSKNWHIPSTFP 1082


>09_04_0180 + 15367737-15367755,15368874-15369739
          Length = 294

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 306 VSMLADPVMRPIPGLSPELGLERSLSESPELDFFFFPL 193
           + +  DP + P+P L PE  +E  L    EL+    P+
Sbjct: 44  LELAEDPALEPLPDLDPEPEVEAELEAELELELLVPPI 81


>11_06_0388 +
           23048576-23051546,23051830-23052371,23052444-23052517,
           23053006-23053090,23053281-23053367,23053585-23053657,
           23053882-23053925,23054041-23054169,23054301-23054402,
           23054529-23054585
          Length = 1387

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
 Frame = +2

Query: 290 SASIETLVRVGIEKEH-GLSPDSKMVVLHDFTP----CVDDELEVKRGQIVNVLYRENDW 454
           S++IE + ++GI+ +   +  DS      +F P    CVD  +  +   IVN L   +D+
Sbjct: 635 SSNIEDMTKLGIQDQQVPVFEDSGSQNSQEFVPDKDICVDTVVNDRSAHIVNDLACNHDF 694

Query: 455 VYVIVAESRRE--GFIPHSY 508
           V+   + S  E   ++P ++
Sbjct: 695 VFPAASSSVEEISNYVPDNH 714


>07_03_0396 + 17672009-17672339,17672408-17673087
          Length = 336

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 699 STTYLXEGS-LLKGHASPSLPSSECPSFVTPSD 604
           S+  L  GS LL+ H    LP+S CP+   PS+
Sbjct: 283 SSLQLQRGSMLLRQHPQQVLPASGCPTIANPSN 315


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,734,245
Number of Sequences: 37544
Number of extensions: 454798
Number of successful extensions: 1181
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)