Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_M03
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72503-6|CAA96594.4| 273|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 43 3e-04
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 40 0.002
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 40 0.002
U97407-8|AAN84851.1| 397|Caenorhabditis elegans Prion-like-(q/n... 39 0.004
U97407-7|AAB52480.2| 457|Caenorhabditis elegans Prion-like-(q/n... 39 0.004
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 39 0.006
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 38 0.007
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 38 0.013
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 38 0.013
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 38 0.013
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 35 0.068
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 35 0.068
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 35 0.068
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 35 0.068
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 35 0.090
AF226866-1|AAF33845.1| 279|Caenorhabditis elegans cell-corpse e... 35 0.090
AC024776-8|AAK68463.1| 279|Caenorhabditis elegans Cell death ab... 35 0.090
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 34 0.12
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein. 33 0.36
AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyros... 33 0.36
AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene ... 33 0.36
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 32 0.48
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 32 0.48
Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z98853-5|CAB57903.1| 290|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 30 2.6
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 29 3.4
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 29 3.4
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 29 4.5
U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF003384-6|AAB54238.2| 451|Caenorhabditis elegans Coenzyme q (u... 29 5.9
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 28 7.8
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 28 7.8
>Z72503-6|CAA96594.4| 273|Caenorhabditis elegans Hypothetical
protein C26C6.8 protein.
Length = 273
Score = 87.4 bits (207), Expect = 1e-17
Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Frame = +2
Query: 374 DFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAPC--EHHDLKKKL 547
+FT V DE+ V RG V +YR++ W+YV V++ R+ GF+P +YC H KKK+
Sbjct: 41 NFTATVADEISVTRGTTVKAIYRDDQWIYVEVSDGRK-GFVPQTYCKLLLNSKHGEKKKV 99
Query: 548 PRSRSPADLAHRDVSQLSVSDGVTNDGHSELGSEGEACPFSKDPSXRYVVLYTFTARDEN 727
S + D + D + EGE F D +L +F +
Sbjct: 100 IGSSATLDRRWEKSNLQRFIDSLPVQKE-----EGEV--FKMDEICEVQILQSFDGSAPD 152
Query: 728 DVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
D+ V+ GE VTVLN DP+W +I SD Q +PS V
Sbjct: 153 DISVKDGESVTVLNISDPEWTYIRNSDNQSGFVPSSHV 190
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 692 VVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVR-SDGQEXXIPSGFV 841
+V+ F+ R D+ V GE++ R DW W VR +D ++ IP+ V
Sbjct: 217 LVVEPFSGRSPLDLTVRPGEWIKCTGRPVDDWLWAVRIADEKQGFIPNKVV 267
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 674 DPSXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGF 838
DP + FTA +++ V RG V + R+D W ++ SDG++ +P +
Sbjct: 31 DPYTPGQLTKNFTATVADEISVTRGTTVKAIYRDD-QWIYVEVSDGRKGFVPQTY 84
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 248 PSSGLSPGMGRITGSASIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIV 427
PS P +G I S+S T I+K +S + V L + DD+L K+ I+
Sbjct: 30 PSHPRIPSIGPIAASSSGNT-----IDKNQNISQSANFVALFQYDARTDDDLSFKKDDIL 84
Query: 428 NVLY-RENDWVYVIVAESRREGFIPHSYCA 514
+L + DW + + R G+IP +Y A
Sbjct: 85 EILNDTQGDWWFARHKATGRTGYIPSNYVA 114
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 680 SXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVR--SDGQEXXIPSGFV 841
S +V L+ + AR ++D+ ++ + + +LN DW W R + G+ IPS +V
Sbjct: 59 SANFVALFQYDARTDDDLSFKKDDILEILNDTQGDW-WFARHKATGRTGYIPSNYV 113
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 43.2 bits (97), Expect = 3e-04
Identities = 39/207 (18%), Positives = 86/207 (41%), Gaps = 2/207 (0%)
Frame = +2
Query: 269 GMGRITGSASIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYREN 448
G+ R+ S + V K +S +K VV + P ++DEL + +G V V+ +
Sbjct: 89 GIARLAFSLNNNCAVTPSSNKIPMMSSKTKAVVKFTYEPRLEDELGLTKGDFVYVVEKST 148
Query: 449 DWVYVIVAESRREGFIPHSYCAPCEHHDLKKKLPRSRSPADLAHRDVSQLSVSDGVTNDG 628
D + A + G+ P +Y E + + + +R+ + +V +
Sbjct: 149 DGWWKGEAPNGGVGWFPSNYVEEVE-------ASTNGNQGSIENRNPAAAAVPAPIM--- 198
Query: 629 HSELGSEGEACPFSKDPSXRYVVLYTFTARDENDVDVERGEFVTVLN--REDPDWYWIVR 802
+ + S+ V LY+F A ++ ++GE + +++ DPDW+
Sbjct: 199 ---MQAPPPKLQASRSSFEVVVALYSFDASSSEELSFKKGERLEIVDHPEHDPDWWMARN 255
Query: 803 SDGQEXXIPSGFVYPAVVQATTQRTHR 883
+ G +P ++ ++++ +H+
Sbjct: 256 ASGTTGLVPRNYIEVVNDSSSSKASHQ 282
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +2
Query: 698 LYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFVYP 847
L+ F ++ ++ +RG+ +T++N++DP+W W + + + PS +V P
Sbjct: 162 LFDFNPQESGELAFKRGDVITLINKDDPNW-WEGQLNNRRGIFPSNYVCP 210
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 692 VVLYTFTARDENDVDVERGEFVTVLNR-EDPDWYWIVRSDGQEXXIPSGFV 841
V + F A +++ +RG + VLN+ EDP WY DG E IPS ++
Sbjct: 4 VAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYK-AELDGNEGFIPSNYI 53
Score = 36.3 bits (80), Expect = 0.029
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +2
Query: 362 VVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAPCEHHDLKK 541
V HDF DEL KRG + VL ++ D + EGFIP +Y E +
Sbjct: 4 VAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGNEGFIPSNYIRMTECNWYLG 63
Query: 542 KLPRS 556
K+ R+
Sbjct: 64 KITRN 68
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 341 LSPDSKMV-VLHDFTPCVDDELEVKRGQIVNVLYRE--NDWVYVIVAESRREGFIPHSYC 511
++ ++K V L DF P EL KRG ++ ++ ++ N W + + R G P +Y
Sbjct: 152 MNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQL---NNRRGIFPSNYV 208
Query: 512 AP 517
P
Sbjct: 209 CP 210
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +2
Query: 698 LYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFVYP 847
L+ F ++ ++ +RG+ +T++N++DP+W W + + + PS +V P
Sbjct: 162 LFDFNPQESGELAFKRGDVITLINKDDPNW-WEGQLNNRRGIFPSNYVCP 210
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 692 VVLYTFTARDENDVDVERGEFVTVLNR-EDPDWYWIVRSDGQEXXIPSGFV 841
V + F A +++ +RG + VLN+ EDP WY DG E IPS ++
Sbjct: 4 VAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYK-AELDGNEGFIPSNYI 53
Score = 36.3 bits (80), Expect = 0.029
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +2
Query: 362 VVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAPCEHHDLKK 541
V HDF DEL KRG + VL ++ D + EGFIP +Y E +
Sbjct: 4 VAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGNEGFIPSNYIRMTECNWYLG 63
Query: 542 KLPRS 556
K+ R+
Sbjct: 64 KITRN 68
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 341 LSPDSKMV-VLHDFTPCVDDELEVKRGQIVNVLYRE--NDWVYVIVAESRREGFIPHSYC 511
++ ++K V L DF P EL KRG ++ ++ ++ N W + + R G P +Y
Sbjct: 152 MNVETKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQL---NNRRGIFPSNYV 208
Query: 512 AP 517
P
Sbjct: 209 CP 210
>U97407-8|AAN84851.1| 397|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform b protein.
Length = 397
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 668 SKDPSXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
S P LY F A + N++ G+ +T+ + +P W W R Q+ PS FV
Sbjct: 209 SNIPEKNVRALYDFEAAESNELSFVAGDIITITDESNPHW-WTGRIGTQQGLFPSSFV 265
>U97407-7|AAB52480.2| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform a protein.
Length = 457
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 668 SKDPSXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
S P LY F A + N++ G+ +T+ + +P W W R Q+ PS FV
Sbjct: 217 SNIPEKNVRALYDFEAAESNELSFVAGDIITITDESNPHW-WTGRIGTQQGLFPSSFV 273
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 689 YVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFVYPAVVQA 862
Y V+Y F A + D+ + G+ + VL + D +W W R +G+E P+ +V +V QA
Sbjct: 899 YTVIYDFEAVETTDLALHVGDTILVLEKND-EW-WKGRCNGREGIFPANYVEISVQQA 954
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 38.3 bits (85), Expect = 0.007
Identities = 35/180 (19%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Frame = +2
Query: 341 LSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAPC 520
+S +K VV + P ++DEL + +G V V+ + D + A + G+ P +Y
Sbjct: 1 MSSKTKAVVKFTYEPRLEDELGLTKGDFVYVVEKSTDGWWKGEAPNGGVGWFPSNYVEEV 60
Query: 521 EHHDLKKKLPRSRSPADLAHRDVSQLSVSDGVTNDGHSELGSEGEACPFSKDPSXRYVVL 700
E + + + +R+ + +V + + +A S + V L
Sbjct: 61 E-------ASTNGNQGSIENRNPAAAAVPAPIMMQAPPP---KLQASRSSFEIQV-VVAL 109
Query: 701 YTFTARDENDVDVERGEFVTVLN--REDPDWYWIVRSDGQEXXIPSGFVYPAVVQATTQR 874
Y+F A ++ ++GE + +++ DPDW+ + G +P ++ V +++ +
Sbjct: 110 YSFDASSSEELSFKKGERLEIVDHPEHDPDWWMARNASGTTGLVPRNYIEVVVNDSSSSK 169
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 725 NDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGF--VYPAVVQATTQRTHR 883
N + V +GE + +L + P+W+ ++ DG E +P+ + + P TQ T +
Sbjct: 837 NGMRVSKGEVLALLEKSTPEWWRALKRDGTEGYVPANYCKIVPGETVTVTQTTQK 891
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 725 NDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGF--VYPAVVQATTQRTHR 883
N + V +GE + +L + P+W+ ++ DG E +P+ + + P TQ T +
Sbjct: 837 NGMRVSKGEVLALLEKSTPEWWRALKRDGTEGYVPANYCKIVPGETVTVTQTTQK 891
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 37.5 bits (83), Expect = 0.013
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 725 NDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGF--VYPAVVQATTQRTHR 883
N + V +GE + +L + P+W+ ++ DG E +P+ + + P TQ T +
Sbjct: 837 NGMRVSKGEVLALLEKSTPEWWRALKRDGTEGYVPANYCKIVPGETVTVTQTTQK 891
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 695 VLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFVYP 847
VLY + A E+++ + V VL + D DWY V DG P +V P
Sbjct: 419 VLYDYDAAKEDELTLRENAIVYVLKKNDDDWYEGV-LDGVTGLFPGNYVVP 468
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 356 KMVVLHDFTPCVDDELEVKRGQIVNVLYRENDWVYVIVAESRREGFIPHSYCAP 517
K+ VL+D+ +DEL ++ IV VL + +D Y V + G P +Y P
Sbjct: 416 KVRVLYDYDAAKEDELTLRENAIVYVLKKNDDDWYEGVLDG-VTGLFPGNYVVP 468
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 35.1 bits (77), Expect = 0.068
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +2
Query: 371 HDFTPCVDDELEVKRGQIVNVLYREND-----WVYVIVAESRREGFIPHSY 508
+DF P +++EVK G+++ VL R +D W+ +I +S + G++P +Y
Sbjct: 1470 YDFLPQGSNQVEVKEGEVIGVLQRTDDDGNPEWL-LIKRDSGKVGYVPAAY 1519
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 365 VLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIP 499
V H F+ DEL V G V VL ND WV ++ + G +P
Sbjct: 256 VRHAFSGRQGDELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 35.1 bits (77), Expect = 0.068
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +2
Query: 371 HDFTPCVDDELEVKRGQIVNVLYREND-----WVYVIVAESRREGFIPHSY 508
+DF P +++EVK G+++ VL R +D W+ +I +S + G++P +Y
Sbjct: 1470 YDFLPQGSNQVEVKEGEVIGVLQRTDDDGNPEWL-LIKRDSGKVGYVPAAY 1519
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 365 VLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIP 499
V H F+ DEL V G V VL ND WV ++ + G +P
Sbjct: 256 VRHAFSGRQGDELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 347 PDSKMVVLHD-FTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCAPC 520
P+ KM+++ + F E+ V+ G ++ ++ + N +W YV + +GF+P S+
Sbjct: 94 PEEKMLIVENRFLAQTPKEMSVEEGDVLYLIEQSNREWWYVASKSRQFKGFVPKSHVVYA 153
Query: 521 EHHD 532
E+ +
Sbjct: 154 EYRE 157
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 347 PDSKMVVLHD-FTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCAPC 520
P+ KM+++ + F E+ V+ G ++ ++ + N +W YV + +GF+P S+
Sbjct: 138 PEEKMLIVENRFLAQTPKEMSVEEGDVLYLIEQSNREWWYVASKSRQFKGFVPKSHVVYA 197
Query: 521 EHHD 532
E+ +
Sbjct: 198 EYRE 201
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 34.7 bits (76), Expect = 0.090
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 680 SXRYVVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFVYP 847
S + +Y FTAR + ++ ++RGE +T + D +W G P+ +V P
Sbjct: 215 SQKMRAIYPFTARSDTELSLKRGEIITRRRQIDSNWLEGSNQIGIVGIFPASYVEP 270
>AF226866-1|AAF33845.1| 279|Caenorhabditis elegans cell-corpse
engulfment proteinCED-2 protein.
Length = 279
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 671 KDPSXRYVV-LYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
K P VV + FT E D+ E+GE + +L++ + DW+ + G +P+ +V
Sbjct: 114 KKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYV 171
>AC024776-8|AAK68463.1| 279|Caenorhabditis elegans Cell death
abnormality protein 2 protein.
Length = 279
Score = 34.7 bits (76), Expect = 0.090
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 671 KDPSXRYVV-LYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
K P VV + FT E D+ E+GE + +L++ + DW+ + G +P+ +V
Sbjct: 114 KKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYV 171
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/87 (25%), Positives = 35/87 (40%)
Frame = +2
Query: 248 PSSGLSPGMGRITGSASIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIV 427
P G P G + S ET + VVL+D+ P DE+ +++G+++
Sbjct: 395 PPVGWHPSDGPDSPPLSTETPDSAKYGDFEEFTTSKPAVVLYDYAPAEGDEIALRKGEMI 454
Query: 428 NVLYRENDWVYVIVAESRREGFIPHSY 508
VL + + S G P SY
Sbjct: 455 EVLTEPDSLGWCTGRVSGNVGLFPASY 481
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 692 VVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
VVLY + + +++ + +GE + VL D + R G P+ +V
Sbjct: 433 VVLYDYAPAEGDEIALRKGEMIEVLTEPDSLGWCTGRVSGNVGLFPASYV 482
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/87 (25%), Positives = 35/87 (40%)
Frame = +2
Query: 248 PSSGLSPGMGRITGSASIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIV 427
P G P G + S ET + VVL+D+ P DE+ +++G+++
Sbjct: 401 PPVGWHPSDGPDSPPLSTETPDSAKYGDFEEFTTSKPAVVLYDYAPAEGDEIALRKGEMI 460
Query: 428 NVLYRENDWVYVIVAESRREGFIPHSY 508
VL + + S G P SY
Sbjct: 461 EVLTEPDSLGWCTGRVSGNVGLFPASY 487
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 692 VVLYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
VVLY + + +++ + +GE + VL D + R G P+ +V
Sbjct: 439 VVLYDYAPAEGDEIALRKGEMIEVLTEPDSLGWCTGRVSGNVGLFPASYV 488
>AF475094-1|AAL84635.1| 533|Caenorhabditis elegans SRC-1 protein.
Length = 533
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +2
Query: 338 GLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCA 514
G +V L+ + D +L ++G + +L N DW YV + + G++P ++ A
Sbjct: 69 GAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVPRNFVA 128
Query: 515 PCEHHDLKK----KLPRSRS 562
+ + ++ K+PR+R+
Sbjct: 129 KQQTIESEEWYAGKIPRNRA 148
>AF419171-1|AAN31394.1| 533|Caenorhabditis elegans protein tyrosine
kinase protein.
Length = 533
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +2
Query: 338 GLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCA 514
G +V L+ + D +L ++G + +L N DW YV + + G++P ++ A
Sbjct: 69 GAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVPRNFVA 128
Query: 515 PCEHHDLKK----KLPRSRS 562
+ + ++ K+PR+R+
Sbjct: 129 KQQTIESEEWYAGKIPRNRA 148
>AC084161-5|AAK29735.4| 533|Caenorhabditis elegans Src oncogene
related protein 1 protein.
Length = 533
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +2
Query: 338 GLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYREN-DWVYVIVAESRREGFIPHSYCA 514
G +V L+ + D +L ++G + +L N DW YV + + G++P ++ A
Sbjct: 69 GAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVPRNFVA 128
Query: 515 PCEHHDLKK----KLPRSRS 562
+ + ++ K+PR+R+
Sbjct: 129 KQQTIESEEWYAGKIPRNRA 148
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 362 VVLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIPHSY 508
+V+H + P DEL++ G +N+L + D W+Y A G+ P SY
Sbjct: 535 LVVHAYQPSQADELQLNIGDSLNILRKMPDGWLYGERAGDGLGGWFPSSY 584
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 362 VVLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIPHSY 508
+V+H + P DEL++ G +N+L + D W+Y A G+ P SY
Sbjct: 1023 LVVHAYQPSQADELQLNIGDSLNILRKMPDGWLYGERAGDGLGGWFPSSY 1072
>Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical
protein C36E8.4 protein.
Length = 548
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 344 SPDSKMVVLHDFTPCVDDELEVKRGQIVNVLYR-ENDW-VYVIVAESRREGFIPHSYCAP 517
SP + VL+DF P DE+E++ GQ V V R +DW + ++++ P S P
Sbjct: 481 SPPTICRVLYDFEPKHADEIEIREGQCVLVEDRIGDDWLIGHVISQHDNSSIDPRSGRFP 540
Query: 518 CEHHDLKK 541
+ L++
Sbjct: 541 TTYVSLRQ 548
>Z98853-5|CAB57903.1| 290|Caenorhabditis elegans Hypothetical
protein R08A2.5 protein.
Length = 290
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 454 GLCHSSRISKRRLHTTFI 507
GL H +RISKR LHTTF+
Sbjct: 95 GLWHVTRISKRMLHTTFV 112
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 480 RDSATMT*TQSFSLYRT-LTICPRFTSNSSSTHGVKSWSTTIFESGLRPCSFSMPTLTNV 304
R S T+ T+ F L R L RF S ++ + GV+ TT+ E+GLR S + T+
Sbjct: 4 RPSGTVAKTE-FQLRRNVLPALKRFVSAAAKSAGVQE-KTTVLENGLRVSSVELNGATSS 61
Query: 303 SMLA 292
+LA
Sbjct: 62 IVLA 65
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 480 RDSATMT*TQSFSLYRT-LTICPRFTSNSSSTHGVKSWSTTIFESGLRPCSFSMPTLTNV 304
R S T+ T+ F L R L RF S ++ + GV+ TT+ E+GLR S + T+
Sbjct: 4 RPSGTVAKTE-FQLRRNVLPALKRFVSAAAKSAGVQE-KTTVLENGLRVSSVELNGATSS 61
Query: 303 SMLA 292
+LA
Sbjct: 62 IVLA 65
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 365 VLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIP 499
V H F+ DEL V G V VL ND WV ++ + G +P
Sbjct: 256 VRHAFSGRQGDELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -3
Query: 426 TICPRFTSNSSSTHGVKSWSTTIFESGLRPCSFSMPTLTNVSMLA 292
T+ RF S ++ + GV+ TT+ E+GLR S + T+ +LA
Sbjct: 8 TVAKRFVSAAAKSAGVQE-KTTVLENGLRVSSVELNGATSSIVLA 51
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -3
Query: 426 TICPRFTSNSSSTHGVKSWSTTIFESGLRPCSFSMPTLTNVSMLA 292
T+ RF S ++ + GV+ TT+ E+GLR S + T+ +LA
Sbjct: 8 TVAKRFVSAAAKSAGVQE-KTTVLENGLRVSSVELNGATSSIVLA 51
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 365 VLHDFTPCVDDELEVKRGQIVNVLYREND-WVYVIVAESRREGFIP 499
V H F+ DEL V G V VL ND WV ++ + G +P
Sbjct: 256 VRHAFSGRQGDELTVNAGDTVRVLRMVNDEWVMCKDPDTEKTGIVP 301
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 383 PCVDDELEVKRGQIVNVLYRENDWVYV-IVAESRREGFIPHS 505
PC+ +LEV G ++ +L ++ W+ V + + + G++P S
Sbjct: 228 PCLWLDLEVNPGDVIQILSKDEKWMQVRKLGDLTQVGYLPTS 269
>U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical
protein F41D9.1 protein.
Length = 826
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 698 LYTFTARDENDVDVERGEFVTVLNREDPDWYWIVRSDGQEXXIPSGFV 841
L F +EN++ + + VT+++ +D + W+ +G P+ FV
Sbjct: 532 LLDFAREEENELGFRKNDIVTIISEKD-EHCWVGEVNGLRGWFPAKFV 578
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical
protein F40F4.6 protein.
Length = 2214
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +2
Query: 569 DLAHRDVSQLSVSDGVTNDGHSELGSEGEACPFS------KDPSXRYVVLYTFTARDEND 730
D H ++ ++ DGV + + G +AC F+ V+ + F ARD ND
Sbjct: 758 DRVHANLQIYAIRDGVQTEVYGSSGMYRDACEFNFYFPPFTCRVPEEVLYFNFFARDNND 817
Query: 731 VDVER 745
+ ++R
Sbjct: 818 MALQR 822
>AF003384-6|AAB54238.2| 451|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 6 protein.
Length = 451
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 284 TGSASIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQIVNVLY-RENDWV 457
T SI+T ++G+ + K+ L F C E+E +RGQ V + END +
Sbjct: 74 TSPTSIDTFKKLGVWDQINSHRTKKVNRLFVFDSCSTSEIEFERGQQEEVAFIIENDLI 132
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 581 RDVSQLSVSDGVTNDGHS-ELGSEGEACPFSKDPSXRYVVLYTFTARDEN 727
+++ L V G T S ++G +PS +Y+VL + RDEN
Sbjct: 442 KEIESLRVLKGETTSHSSYSRSAKGNIAIQEAEPSGKYIVLENISRRDEN 491
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 581 RDVSQLSVSDGVTNDGHS-ELGSEGEACPFSKDPSXRYVVLYTFTARDEN 727
+++ L V G T S ++G +PS +Y+VL + RDEN
Sbjct: 425 KEIESLRVLKGETTSHSSYSRSAKGNIAIQEAEPSGKYIVLENISRRDEN 474
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,314,613
Number of Sequences: 27780
Number of extensions: 395872
Number of successful extensions: 1067
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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