Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_M02
         (825 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0072 - 31469595-31469684,31469762-31469848,31469968-314700...    33   0.21 
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    30   1.9  
04_01_0122 + 1267048-1267149,1267764-1267855,1268137-1268234,126...    30   2.6  
05_05_0127 - 22580720-22580808,22580936-22580987,22581703-225819...    29   3.4  
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423...    29   3.4  
07_01_0945 - 7973736-7974275,7974446-7974580                           29   4.5  

>03_06_0072 -
           31469595-31469684,31469762-31469848,31469968-31470036,
           31470117-31470185,31470269-31471306
          Length = 450

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -3

Query: 436 LTFCALRSATISSVRNSTSSLSPFV*SAFNPQ---PQLQVLEWL-CSKLVEARVPS 281
           + F +   +    V  S+ S SP + SAFNP    P LQ  +WL CS L+ +  PS
Sbjct: 124 MVFTSGMGSATGRVGASSLSASPSISSAFNPAALLPFLQATKWLPCSDLITSAAPS 179


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
 Frame = +3

Query: 624 PSVXRXNPXPXXKPP-PXGFXPGPXIFXKNPPXGXXXGGG 740
           PS     P P    P P G  P P  +   PP G   GGG
Sbjct: 708 PSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGPPGGGG 747


>04_01_0122 +
           1267048-1267149,1267764-1267855,1268137-1268234,
           1268333-1268488,1268736-1269355,1269480-1269547,
           1269848-1270099,1270390-1270525,1271054-1271246,
           1271386-1271939
          Length = 756

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 460 GFTVKVDGAEVVLTKQLKDETIRVTFNVNHTVDSD 564
           G  + V+ +E+V +K  KD++ +VTF     V  D
Sbjct: 688 GIEMAVEPSELVFSKDKKDQSFKVTFKATRKVQGD 722


>05_05_0127 -
           22580720-22580808,22580936-22580987,22581703-22581908,
           22582019-22582152,22582239-22582369,22583333-22583392,
           22583615-22583755,22583880-22584347,22584524-22584686,
           22585373-22585476,22585755-22585853,22586177-22586281,
           22586516-22586596,22587168-22587986,22588497-22588553
          Length = 902

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 503 FVKTTSAPSTFTVKPSTSARERLDLLCFAFSNYFF-CQELYQFSFTFRVKRLQ 348
           +++ TSAP   TV+P     + L ++  +  NY + C +L        V+R+Q
Sbjct: 621 YLRLTSAPDPATVRPEHVLEKALSMVETSQKNYLYKCDQLKSIRQDLTVQRIQ 673


>01_06_1263 +
           35840502-35841308,35841763-35841969,35842272-35842370,
           35843361-35843464,35844521-35844698,35844774-35845244,
           35845383-35845523,35846290-35846349,35846427-35846490,
           35847295-35847524,35847606-35847704
          Length = 819

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 503 FVKTTSAPSTFTVKPSTSARERLDLLCFAFSNYFF-CQELYQFSFTFRVKRLQ 348
           +++ TSAP   TV+P     + L ++  +  NY + C +L        V+R+Q
Sbjct: 611 YLRLTSAPDPATVRPEDVLEKALHMVETSQKNYLYKCDQLKSIRQDLTVQRIQ 663


>07_01_0945 - 7973736-7974275,7974446-7974580
          Length = 224

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 363 CEAPSTRSRSCKYWNGCVASWWKPGSHLTFESSSCAI 253
           C  P   S   + W GC A+W  P + L+  S S A+
Sbjct: 166 CRWPRVASTGARQWQGCHAAWLSPVAPLS-SSLSAAV 201


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,141,347
Number of Sequences: 37544
Number of extensions: 394300
Number of successful extensions: 1067
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)