Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_L23
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0762 + 36078414-36078539,36078700-36078750,36078832-360789...    31   1.2  
02_04_0466 - 23149906-23150046,23150129-23150279,23151684-231517...    29   3.7  
08_02_1524 + 27657711-27657768,27658612-27658671,27658805-276588...    29   6.5  
07_03_0557 + 19447367-19447517,19447630-19447730,19448359-194484...    28   8.6  

>03_06_0762 +
           36078414-36078539,36078700-36078750,36078832-36078981,
           36079055-36079803,36079914-36080013,36080116-36080259,
           36080333-36080452,36080532-36080846
          Length = 584

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
 Frame = +3

Query: 204 NIKPRYFTRSLLNGIEKSNHLIRVLNLCSYSNIPPY-SDSGNEIDKDISQEKLSGFAKAF 380
           NIK  +F    +NG++ S H   ++ +   SN PP  S   N +D   S        K  
Sbjct: 171 NIKSMFFISQAINGLDTSRHHHPLMTI--VSNKPPTPSPKLNSLDDTSSSSNKK--KKMV 226

Query: 381 EKQSQILENPEEEKSYTFASLLRNSKLMDL 470
           ++ +++ E   +     F  LLR+S++ DL
Sbjct: 227 QQPNKLSERIVKCLICIFIRLLRSSRVADL 256


>02_04_0466 -
           23149906-23150046,23150129-23150279,23151684-23151785,
           23151893-23152110,23152203-23152325,23152863-23152991,
           23153191-23153274,23154009-23154104,23154735-23154816,
           23155047-23155117,23155269-23155363,23156090-23156276,
           23156586-23156757,23157800-23157948,23158578-23158701,
           23158836-23158991,23159101-23159247,23160470-23160489
          Length = 748

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/88 (18%), Positives = 41/88 (46%)
 Frame = +3

Query: 204 NIKPRYFTRSLLNGIEKSNHLIRVLNLCSYSNIPPYSDSGNEIDKDISQEKLSGFAKAFE 383
           ++K +   RS L+ +E  +       + +++ +  Y++S  EID+ +        A+  +
Sbjct: 145 HLKVQEEVRSKLSALEVCHQSEIQRTVSAFARLQKYAESRKEIDRRLDVHFQRKIAEVLD 204

Query: 384 KQSQILENPEEEKSYTFASLLRNSKLMD 467
           K   +++   E+KS      +R+   ++
Sbjct: 205 KHLSMVQRDHEQKSQIVERRIRDDAALE 232


>08_02_1524 +
           27657711-27657768,27658612-27658671,27658805-27658890,
           27659343-27659963,27660460-27660618
          Length = 327

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 330 IDKDISQEKLSGFAKAFEKQSQILENPEEEKSY 428
           + K I   KLS  +KAF+K++ ++ N E+ + Y
Sbjct: 245 LSKQIQMPKLSLISKAFQKKNPVICNEEQLQGY 277


>07_03_0557 +
           19447367-19447517,19447630-19447730,19448359-19448480,
           19448725-19448912,19449000-19449178,19449370-19449711,
           19449795-19449859,19450259-19450317,19450486-19450573,
           19450653-19450722,19450759-19450992,19451072-19451411,
           19451643-19451691,19452690-19452780,19453077-19453442
          Length = 814

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 339 DISQEKLSGFAKAFEKQSQILENPEE 416
           DIS+EKL    K +E    I+ +PEE
Sbjct: 522 DISKEKLDEICKVYETMEAIVTHPEE 547


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,222,076
Number of Sequences: 37544
Number of extensions: 341939
Number of successful extensions: 795
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)