Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_L23
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010150-1|AAH10150.1| 187|Homo sapiens mitochondrial ribosomal... 141 4e-33
AK223069-1|BAD96789.1| 187|Homo sapiens mitochondrial ribosomal... 141 4e-33
EF152584-1|ABO34073.1| 278|Homo sapiens PC1/MRPS28 fusion prote... 89 2e-17
Z26652-1|CAA81393.1| 993|Homo sapiens FLT3 receptor tyrosine ki... 31 7.4
U02687-1|AAA18947.1| 993|Homo sapiens serine/threonine protein ... 31 7.4
BC126350-1|AAI26351.1| 993|Homo sapiens fms-related tyrosine ki... 31 7.4
BC036028-1|AAH36028.1| 596|Homo sapiens FLT3 protein protein. 31 7.4
AL591024-3|CAH70634.1| 996|Homo sapiens fms-related tyrosine ki... 31 7.4
AL445262-1|CAI17231.1| 996|Homo sapiens fms-related tyrosine ki... 31 7.4
AL356915-1|CAI12447.1| 996|Homo sapiens fms-related tyrosine ki... 31 7.4
BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegati... 30 9.8
BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegati... 30 9.8
BC087834-1|AAH87834.1| 393|Homo sapiens suppressor of variegati... 30 9.8
BC065287-1|AAH65287.1| 393|Homo sapiens suppressor of variegati... 30 9.8
BC002522-1|AAH02522.2| 393|Homo sapiens suppressor of variegati... 30 9.8
AF151843-1|AAD34080.1| 384|Homo sapiens CGI-85 protein protein. 30 9.8
>BC010150-1|AAH10150.1| 187|Homo sapiens mitochondrial ribosomal
protein S28 protein.
Length = 187
Score = 141 bits (341), Expect = 4e-33
Identities = 71/139 (51%), Positives = 99/139 (71%), Gaps = 6/139 (4%)
Frame = +3
Query: 312 SDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEE------EKSYTFASLLRNSKLMDLG 473
S+SG+ K+ + + GFA A E+ S++L+ E + +FAS+LR+S L +G
Sbjct: 35 SESGSSNAKE-PKTRAGGFASALERHSELLQKVEPLQKGSPKNVESFASMLRHSPLTQMG 93
Query: 474 DPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGTRVRIQINDLELSSRF 653
K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE+Y +GTRVR+++ DLEL+SRF
Sbjct: 94 PAKDKLVIGRIFHIVENDLYIDFGGKFHCVCRRPEVDGEKYQKGTRVRLRLLDLELTSRF 153
Query: 654 LGSSTDLTLLEADCKLLGI 710
LG++TD T+LEA+ LLGI
Sbjct: 154 LGATTDTTVLEANAVLLGI 172
>AK223069-1|BAD96789.1| 187|Homo sapiens mitochondrial ribosomal
protein S28 variant protein.
Length = 187
Score = 141 bits (341), Expect = 4e-33
Identities = 71/139 (51%), Positives = 99/139 (71%), Gaps = 6/139 (4%)
Frame = +3
Query: 312 SDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEE------EKSYTFASLLRNSKLMDLG 473
S+SG+ K+ + + GFA A E+ S++L+ E + +FAS+LR+S L +G
Sbjct: 35 SESGSSNAKE-PKTRAGGFASALERHSELLQKVEPLQKGSPKNVESFASMLRHSPLTQMG 93
Query: 474 DPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGTRVRIQINDLELSSRF 653
K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE+Y +GTRVR+++ DLEL+SRF
Sbjct: 94 PAKDKLVIGRIFHIVENDLYIDFGGKFHCVCRRPGVDGEKYQKGTRVRLRLLDLELTSRF 153
Query: 654 LGSSTDLTLLEADCKLLGI 710
LG++TD T+LEA+ LLGI
Sbjct: 154 LGATTDTTVLEANAVLLGI 172
>EF152584-1|ABO34073.1| 278|Homo sapiens PC1/MRPS28 fusion protein
protein.
Length = 278
Score = 89.0 bits (211), Expect = 2e-17
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +3
Query: 309 YSDSGNEIDKDISQEKLSGFAKAFEKQSQILE-NPEEEKSYTFASLLRNSKLMDLGDPVG 485
+S G+ I K + K S K+FE++ + L+ +P+ +S FAS+LR+S L +G
Sbjct: 154 FSSVGSVITKKLEDVKNSPTFKSFEEKVENLKGSPKNVES--FASMLRHSPLTQMGPAKD 211
Query: 486 KTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGE 590
K VIG+IFH+VE+DLYIDFG KFHCVC RP + GE
Sbjct: 212 KLVIGRIFHIVENDLYIDFGGKFHCVCRRPEVDGE 246
>Z26652-1|CAA81393.1| 993|Homo sapiens FLT3 receptor tyrosine
kinase precursor protein.
Length = 993
Score = 30.7 bits (66), Expect = 7.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 450 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 298
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>U02687-1|AAA18947.1| 993|Homo sapiens serine/threonine protein
kinase protein.
Length = 993
Score = 30.7 bits (66), Expect = 7.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 450 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 298
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>BC126350-1|AAI26351.1| 993|Homo sapiens fms-related tyrosine
kinase 3 protein.
Length = 993
Score = 30.7 bits (66), Expect = 7.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 450 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 298
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>BC036028-1|AAH36028.1| 596|Homo sapiens FLT3 protein protein.
Length = 596
Score = 30.7 bits (66), Expect = 7.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 450 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 298
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>AL591024-3|CAH70634.1| 996|Homo sapiens fms-related tyrosine
kinase 3 protein.
Length = 996
Score = 30.7 bits (66), Expect = 7.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 450 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 298
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>AL445262-1|CAI17231.1| 996|Homo sapiens fms-related tyrosine
kinase 3 protein.
Length = 996
Score = 30.7 bits (66), Expect = 7.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 450 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 298
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>AL356915-1|CAI12447.1| 996|Homo sapiens fms-related tyrosine
kinase 3 protein.
Length = 996
Score = 30.7 bits (66), Expect = 7.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 450 SEVMKRKYNFFLLPDSPEFEIVFQRLLRNHLIFPAKYPYRFRYQNQNTEGC 298
+E +Y F+ ++ + I+F +RN L++ + PY + +NQ+ C
Sbjct: 134 TETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVC 184
>BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1, isoform 1 protein.
Length = 885
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 805 YYLTKTKQKQITIFNNMFIX*HLQLV*WGVDIIPSNLQSASRSVRSVLDPK--KRDDNSK 632
Y+L K K ++ ++FI + G +I+P N S+ ++ ++ K KR+D +
Sbjct: 166 YFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIE 225
Query: 631 SLI-CIRTLVPLTYSSPLKFG 572
L+ CI L + + L+ G
Sbjct: 226 LLVGCIAELSEIEENMLLRHG 246
>BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 885
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 805 YYLTKTKQKQITIFNNMFIX*HLQLV*WGVDIIPSNLQSASRSVRSVLDPK--KRDDNSK 632
Y+L K K ++ ++FI + G +I+P N S+ ++ ++ K KR+D +
Sbjct: 166 YFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIE 225
Query: 631 SLI-CIRTLVPLTYSSPLKFG 572
L+ CI L + + L+ G
Sbjct: 226 LLVGCIAELSEIEENMLLRHG 246
>BC087834-1|AAH87834.1| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 805 YYLTKTKQKQITIFNNMFIX*HLQLV*WGVDIIPSNLQSASRSVRSVLDPK--KRDDNSK 632
Y+L K K ++ ++FI + G +I+P N S+ ++ ++ K KR+D +
Sbjct: 166 YFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIE 225
Query: 631 SLI-CIRTLVPLTYSSPLKFG 572
L+ CI L + + L+ G
Sbjct: 226 LLVGCIAELSEIEENMLLRHG 246
>BC065287-1|AAH65287.1| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 805 YYLTKTKQKQITIFNNMFIX*HLQLV*WGVDIIPSNLQSASRSVRSVLDPK--KRDDNSK 632
Y+L K K ++ ++FI + G +I+P N S+ ++ ++ K KR+D +
Sbjct: 166 YFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIE 225
Query: 631 SLI-CIRTLVPLTYSSPLKFG 572
L+ CI L + + L+ G
Sbjct: 226 LLVGCIAELSEIEENMLLRHG 246
>BC002522-1|AAH02522.2| 393|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 393
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 805 YYLTKTKQKQITIFNNMFIX*HLQLV*WGVDIIPSNLQSASRSVRSVLDPK--KRDDNSK 632
Y+L K K ++ ++FI + G +I+P N S+ ++ ++ K KR+D +
Sbjct: 166 YFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIE 225
Query: 631 SLI-CIRTLVPLTYSSPLKFG 572
L+ CI L + + L+ G
Sbjct: 226 LLVGCIAELSEIEENMLLRHG 246
>AF151843-1|AAD34080.1| 384|Homo sapiens CGI-85 protein protein.
Length = 384
Score = 30.3 bits (65), Expect = 9.8
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 805 YYLTKTKQKQITIFNNMFIX*HLQLV*WGVDIIPSNLQSASRSVRSVLDPK--KRDDNSK 632
Y+L K K ++ ++FI + G +I+P N S+ ++ ++ K KR+D +
Sbjct: 157 YFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIE 216
Query: 631 SLI-CIRTLVPLTYSSPLKFG 572
L+ CI L + + L+ G
Sbjct: 217 LLVGCIAELSEIEENMLLRHG 237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,875,940
Number of Sequences: 237096
Number of extensions: 2109715
Number of successful extensions: 3080
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3080
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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